Strain Fitness in Pantoea sp. MT58 around IAI47_10820

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
2,284,056	+				+0.1
2,284,056	+				+0.2
2,284,056	+				-0.6
2,284,057	-				-0.8
2,284,057	-				+2.8
2,284,059	+				-0.1
2,284,059	+				+0.6
2,284,059	+				-2.1
2,284,059	+				-0.8
2,284,059	+				-1.5
2,284,059	+				+0.2
2,284,059	+				+0.9
2,284,059	+				-0.2
2,284,059	+				+1.1
2,284,060	-				-2.3
2,284,060	-				+1.1
2,284,060	-				-0.2
2,284,060	-				+0.2
2,284,060	-				-0.8
2,284,060	-				-0.7
2,284,061	+				+1.4
2,284,061	+				+0.9
2,284,061	+				+0.2
2,284,061	+				+0.6
2,284,062	-				+0.7
2,284,110	+				-1.3
2,284,111	-				-0.4
2,284,111	-				-0.6
2,284,111	-				-1.3
2,284,111	-				-0.2
2,284,113	+				+1.5
2,284,113	+				-1.0
2,284,114	-				-0.0
2,284,114	-				+0.8
2,284,114	-				+0.1
2,284,114	-				-0.3
2,284,114	-				-0.1
2,284,176	-				+0.7
2,284,176	-				-0.3
2,284,799	-				+0.1
2,284,804	-				-0.9
2,284,826	-				-0.3
2,284,846	+				+0.8
2,284,847	-				+1.6
2,284,850	+				-0.6
2,284,850	+				+0.5
2,284,850	+				-0.2
2,284,850	+				-0.2
2,284,851	-				+0.2
2,284,861	+				-0.2
2,284,861	+				-0.2
2,284,896	-				-0.1
2,284,896	-				-0.1
2,284,896	-				+1.2
2,284,907	+				+0.1
2,284,908	-				+0.6
2,284,908	-				-0.2
2,284,913	-				+1.4
2,284,984	+				-0.3
2,284,985	-				+0.3
2,284,985	-				+1.2
2,285,070	+				+1.5
2,285,071	-				+1.0
2,285,076	+				+0.5
2,285,077	-				-0.0
2,285,248	+		IAI47_10820	0.20	+0.4
2,285,280	+		IAI47_10820	0.22	+1.6
2,285,281	-		IAI47_10820	0.22	+0.7
2,285,291	+		IAI47_10820	0.23	+1.0
2,285,291	+		IAI47_10820	0.23	+0.5
2,285,291	+		IAI47_10820	0.23	+0.8
2,285,306	-		IAI47_10820	0.24	+0.1
2,285,306	-		IAI47_10820	0.24	+1.8
2,285,362	+		IAI47_10820	0.28	+1.4
2,285,363	-		IAI47_10820	0.28	+0.1
2,285,363	-		IAI47_10820	0.28	+0.1
2,285,500	+		IAI47_10820	0.38	+0.2
2,285,500	+		IAI47_10820	0.38	+1.0
2,285,500	+		IAI47_10820	0.38	-0.3
2,285,500	+		IAI47_10820	0.38	+1.9
2,285,500	+		IAI47_10820	0.38	+1.0
2,285,500	+		IAI47_10820	0.38	+0.2
2,285,500	+		IAI47_10820	0.38	-0.8
2,285,500	+		IAI47_10820	0.38	+0.2
2,285,500	+		IAI47_10820	0.38	+0.2
2,285,500	+		IAI47_10820	0.38	+1.1
2,285,501	-		IAI47_10820	0.38	-0.8
2,285,501	-		IAI47_10820	0.38	+1.5
2,285,501	-		IAI47_10820	0.38	-0.8
2,285,501	-		IAI47_10820	0.38	+0.7
2,285,501	-		IAI47_10820	0.38	-0.2
2,285,501	-		IAI47_10820	0.38	+0.1
2,285,501	-		IAI47_10820	0.38	-0.2
2,285,501	-		IAI47_10820	0.38	-0.4
2,285,501	-		IAI47_10820	0.38	+0.5
2,285,501	-		IAI47_10820	0.38	-0.0
2,285,501	-		IAI47_10820	0.38	+1.2
2,285,501	-		IAI47_10820	0.38	-0.2
2,285,501	-		IAI47_10820	0.38	+0.2
2,285,501	-		IAI47_10820	0.38	+0.5
2,285,508	+		IAI47_10820	0.39	+0.2
2,285,508	+		IAI47_10820	0.39	+0.8
2,285,508	+		IAI47_10820	0.39	+0.2
2,285,509	-		IAI47_10820	0.39	-0.8
2,285,509	-		IAI47_10820	0.39	+3.4
2,285,509	-		IAI47_10820	0.39	+0.2
2,285,509	-		IAI47_10820	0.39	-0.5
2,285,509	-		IAI47_10820	0.39	-0.3
2,285,509	-		IAI47_10820	0.39	+1.2
2,285,512	+		IAI47_10820	0.39	-0.3
2,285,512	+		IAI47_10820	0.39	-0.0
2,285,512	+		IAI47_10820	0.39	-0.1
2,285,513	-		IAI47_10820	0.39	+2.0
2,285,559	-		IAI47_10820	0.43	+1.7
2,285,575	+		IAI47_10820	0.44	+0.5
2,285,576	-		IAI47_10820	0.44	-2.1
2,285,589	+		IAI47_10820	0.45	+1.2
2,285,589	+		IAI47_10820	0.45	+2.1
2,285,589	+		IAI47_10820	0.45	+0.2
2,285,589	+		IAI47_10820	0.45	+0.2
2,285,590	-		IAI47_10820	0.45	+0.1
2,285,590	-		IAI47_10820	0.45	-0.6
2,285,595	+		IAI47_10820	0.45	-0.0
2,285,596	-		IAI47_10820	0.45	+0.5
2,285,596	-		IAI47_10820	0.45	+2.0
2,285,596	-		IAI47_10820	0.45	-0.0
2,285,596	-		IAI47_10820	0.45	+0.5
2,286,004	+		IAI47_10820	0.75	+0.7
2,286,004	+		IAI47_10820	0.75	+0.2
2,286,004	+		IAI47_10820	0.75	+0.2
2,286,004	+		IAI47_10820	0.75	+1.6
2,286,004	+		IAI47_10820	0.75	+0.8
2,286,004	+		IAI47_10820	0.75	+0.8
2,286,005	-		IAI47_10820	0.75	+0.9
2,286,005	-		IAI47_10820	0.75	+2.5
2,286,005	-		IAI47_10820	0.75	+0.2
2,286,005	-		IAI47_10820	0.75	+0.7
2,286,006	+		IAI47_10820	0.75	+2.0
2,286,012	+		IAI47_10820	0.75	+0.7
2,286,013	-		IAI47_10820	0.76	-1.8
2,286,013	-		IAI47_10820	0.76	+1.2
2,286,013	-		IAI47_10820	0.76	+0.4
2,286,064	+		IAI47_10820	0.79	+1.1
2,286,083	+		IAI47_10820	0.81	+0.1
2,286,083	+		IAI47_10820	0.81	+0.7
2,286,115	+		IAI47_10820	0.83	+1.3
2,286,116	-		IAI47_10820	0.83	-0.3
2,286,117	+		IAI47_10820	0.83	-0.8
2,286,117	+		IAI47_10820	0.83	+0.2
2,286,117	+		IAI47_10820	0.83	+0.9
2,286,118	-		IAI47_10820	0.83	+0.2
2,286,123	+		IAI47_10820	0.84	+0.5
2,286,123	+		IAI47_10820	0.84	-1.6
2,286,123	+		IAI47_10820	0.84	-0.0
2,286,124	-		IAI47_10820	0.84	+0.2
2,286,124	-		IAI47_10820	0.84	+1.1
2,286,144	+		IAI47_10820	0.85	+0.9
2,286,144	+		IAI47_10820	0.85	+1.4
2,286,145	-		IAI47_10820	0.85	+0.8
2,286,145	-		IAI47_10820	0.85	-0.2
2,286,157	+		IAI47_10820	0.86	+0.8
2,286,157	+		IAI47_10820	0.86	+0.2
2,286,158	-		IAI47_10820	0.86	+0.2
2,286,185	-		IAI47_10820	0.88	+0.5
2,286,249	+				+1.8
2,286,252	+				+1.0
2,286,252	+				+0.9
2,286,292	-				-0.6
2,286,302	+				-0.5
2,286,303	-				+0.4
2,286,346	+				-0.4
2,286,347	-				+1.7
2,286,347	-				+1.2
2,286,347	-				-0.5
2,286,433	-				+0.2
2,286,433	-				-0.5
2,286,508	+				-0.5
2,286,508	+				-1.1
2,286,508	+				-0.3
2,286,508	+				-1.1
2,286,508	+				+0.6
2,286,521	+		IAI47_10825	0.26	-0.2
2,286,521	+		IAI47_10825	0.26	+1.6
2,286,566	+		IAI47_10825	0.84	-0.1
2,286,659	+				-0.5
2,286,659	+				-0.2
2,286,659	+				+0.1
2,286,659	+				+1.0
2,286,659	+				+0.2
2,286,659	+				+0.8
2,286,663	+				+0.2
2,286,663	+				-0.9
2,286,663	+				-0.6
2,286,664	-				-1.2
2,286,666	+				+0.4
2,286,666	+				+0.9
2,286,666	+				+1.1
2,286,667	-				+1.1
2,286,677	-		IAI47_10835	0.10	+0.6
2,286,832	-				+1.2
2,286,835	+				+0.2
2,286,835	+				+0.0
2,286,836	-				-0.4
2,286,844	+				+0.2
2,286,844	+				+0.6
2,286,844	+				+0.7
2,286,844	+				-1.6
2,286,844	+				+0.7
2,286,844	+				+1.2
2,286,861	+				-0.3
2,286,861	+				-0.6
2,286,861	+				-0.9
2,286,862	-				-1.3
2,286,890	+				+0.4
2,286,890	+				-0.4
2,286,890	+				-1.3
2,286,890	+				+1.7
2,286,891	-				-0.8
2,286,891	-				+0.2
2,286,891	-				-1.3
2,286,909	-				-1.6
2,286,982	+				-0.3
2,286,982	+				+0.8
2,286,982	+				-1.7
2,286,982	+				-0.8
2,286,982	+				-0.2
2,286,983	-				+0.8
2,286,989	-				-1.3
2,286,996	-				+0.2
2,287,189	+				-0.8
2,287,189	+				+0.2
2,287,237	+		IAI47_10840	0.10	-2.2
2,287,237	+		IAI47_10840	0.10	-0.5
2,287,237	+		IAI47_10840	0.10	-0.8
2,287,238	-		IAI47_10840	0.10	-1.8
2,287,288	+		IAI47_10840	0.14	+0.2