Strain Fitness in Pantoea sp. MT58 around IAI47_10805

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
2,280,244	+				-1.7
2,280,267	+				-1.3
2,280,267	+				-0.8
2,280,267	+				-0.2
2,280,267	+				-2.8
2,280,268	-				-2.1
2,280,526	+		IAI47_10800	0.34	-0.6
2,280,526	+		IAI47_10800	0.34	-0.3
2,280,553	+		IAI47_10800	0.37	-0.8
2,280,553	+		IAI47_10800	0.37	-1.8
2,280,554	-		IAI47_10800	0.37	-1.6
2,280,554	-		IAI47_10800	0.37	-1.6
2,280,554	-		IAI47_10800	0.37	-0.8
2,280,699	-		IAI47_10800	0.53	-1.0
2,280,733	+		IAI47_10800	0.57	+0.0
2,280,744	+		IAI47_10800	0.58	-1.3
2,280,744	+		IAI47_10800	0.58	-1.6
2,280,744	+		IAI47_10800	0.58	-1.4
2,280,744	+		IAI47_10800	0.58	-2.8
2,280,745	-		IAI47_10800	0.58	-0.8
2,280,745	-		IAI47_10800	0.58	-2.0
2,280,745	-		IAI47_10800	0.58	-1.3
2,280,745	-		IAI47_10800	0.58	+1.0
2,280,745	-		IAI47_10800	0.58	-0.1
2,280,745	-		IAI47_10800	0.58	-3.8
2,280,745	-		IAI47_10800	0.58	+1.6
2,280,780	+		IAI47_10800	0.62	-0.8
2,280,818	-		IAI47_10800	0.66	+0.7
2,280,952	+		IAI47_10800	0.81	-2.6
2,280,953	+		IAI47_10800	0.81	-0.8
2,280,953	+		IAI47_10800	0.81	-0.8
2,280,954	-		IAI47_10800	0.81	+0.2
2,280,954	-		IAI47_10800	0.81	-0.5
2,281,020	+		IAI47_10800	0.89	-1.0
2,281,020	+		IAI47_10800	0.89	-3.0
2,281,020	+		IAI47_10800	0.89	-1.8
2,281,020	+		IAI47_10800	0.89	-0.6
2,281,020	+		IAI47_10800	0.89	+1.2
2,281,021	-		IAI47_10800	0.89	-0.8
2,281,046	+				-1.3
2,281,046	+				-0.6
2,281,047	-				-1.3
2,281,047	-				+1.2
2,281,047	-				-1.3
2,281,067	-				-0.3
2,281,067	-				-1.3
2,281,103	+				-0.6
2,281,103	+				+3.0
2,281,103	+				-0.7
2,281,103	+				-1.8
2,281,103	+				-0.3
2,281,103	+				+2.2
2,281,104	-				-2.1
2,281,104	-				-3.2
2,281,104	-				-2.3
2,281,104	-				+0.1
2,281,104	-				-3.8
2,281,104	-				-2.1
2,281,104	-				-1.9
2,281,104	-				+1.2
2,281,110	+				-1.3
2,281,110	+				-2.2
2,281,110	+				-0.3
2,281,111	-				-0.9
2,281,111	-				-1.0
2,281,111	-				-2.1
2,281,111	-				-2.2
2,281,111	-				-1.6
2,281,123	+				-1.0
2,281,123	+				-2.6
2,281,124	-				-0.3
2,281,124	-				-0.0
2,281,160	+				-1.8
2,281,160	+				-0.0
2,281,160	+				-0.8
2,281,161	-				-1.3
2,281,161	-				-1.6
2,281,192	+				-0.4
2,281,192	+				-0.3
2,281,192	+				-1.1
2,281,193	-				-1.1
2,281,193	-				-1.2
2,281,251	+				-0.1
2,281,251	+				+0.8
2,281,252	-				-0.8
2,281,252	-				-1.0
2,281,252	-				+0.6
2,281,252	-				-1.2
2,281,258	+				-1.6
2,281,258	+				-0.6
2,281,258	+				+0.2
2,281,258	+				-1.2
2,281,259	-				-0.3
2,281,259	-				-1.1
2,281,259	-				-1.1
2,281,259	-				-3.6
2,281,259	-				-0.2
2,281,299	+				-2.6
2,281,299	+				-3.1
2,281,299	+				+0.7
2,281,300	-				+0.2
2,281,300	-				-1.6
2,281,300	-				-0.8
2,281,300	-				-1.6
2,281,303	+				-3.3
2,281,303	+				-1.3
2,281,303	+				-1.1
2,281,303	+				+0.2
2,281,303	+				-0.8
2,281,303	+				-2.9
2,281,303	+				+0.2
2,281,303	+				-1.0
2,281,303	+				-1.4
2,281,303	+				-1.3
2,281,304	-				-2.3
2,281,304	-				-1.2
2,281,304	-				-2.9
2,281,304	-				-2.1
2,281,338	+				-0.4
2,281,338	+				-0.8
2,281,339	-				-0.1
2,281,368	+		IAI47_10805	0.11	-1.3
2,281,368	+		IAI47_10805	0.11	+0.2
2,281,369	-		IAI47_10805	0.11	-1.3
2,281,509	+		IAI47_10805	0.23	-0.0
2,281,509	+		IAI47_10805	0.23	-2.8
2,281,509	+		IAI47_10805	0.23	-1.8
2,281,509	+		IAI47_10805	0.23	-0.3
2,281,509	+		IAI47_10805	0.23	-2.6
2,281,509	+		IAI47_10805	0.23	+0.1
2,281,509	+		IAI47_10805	0.23	+0.2
2,281,509	+		IAI47_10805	0.23	-1.1
2,281,510	-		IAI47_10805	0.23	-3.5
2,281,510	-		IAI47_10805	0.23	-0.8
2,281,510	-		IAI47_10805	0.23	-2.3
2,281,510	-		IAI47_10805	0.23	-1.8
2,281,510	-		IAI47_10805	0.23	-0.2
2,281,513	+		IAI47_10805	0.23	-0.8
2,281,513	+		IAI47_10805	0.23	-2.1
2,281,513	+		IAI47_10805	0.23	-2.3
2,281,513	+		IAI47_10805	0.23	-0.2
2,281,513	+		IAI47_10805	0.23	-1.8
2,281,513	+		IAI47_10805	0.23	-0.8
2,281,513	+		IAI47_10805	0.23	+1.2
2,281,514	-		IAI47_10805	0.24	-2.2
2,281,514	-		IAI47_10805	0.24	-1.6
2,281,514	-		IAI47_10805	0.24	-1.3
2,281,514	-		IAI47_10805	0.24	-2.1
2,281,514	-		IAI47_10805	0.24	-1.3
2,281,514	-		IAI47_10805	0.24	-1.8
2,281,514	-		IAI47_10805	0.24	-1.1
2,281,514	-		IAI47_10805	0.24	-1.9
2,281,514	-		IAI47_10805	0.24	-1.2
2,281,514	-		IAI47_10805	0.24	-0.8
2,281,514	-		IAI47_10805	0.24	-1.3
2,281,570	-		IAI47_10805	0.28	-1.8
2,281,635	+		IAI47_10805	0.34	-1.1
2,281,635	+		IAI47_10805	0.34	-0.9
2,281,635	+		IAI47_10805	0.34	-1.6
2,281,635	+		IAI47_10805	0.34	-1.8
2,281,636	-		IAI47_10805	0.34	-2.1
2,281,636	-		IAI47_10805	0.34	-2.2
2,281,636	-		IAI47_10805	0.34	-2.0
2,281,636	-		IAI47_10805	0.34	-1.1
2,281,821	+		IAI47_10805	0.49	-0.9
2,281,822	-		IAI47_10805	0.49	-0.6
2,281,822	-		IAI47_10805	0.49	+0.7
2,281,822	-		IAI47_10805	0.49	-1.3
2,281,843	+		IAI47_10805	0.51	-1.8
2,281,844	-		IAI47_10805	0.51	-1.6
2,281,844	-		IAI47_10805	0.51	-1.2
2,281,846	-		IAI47_10805	0.51	+1.8
2,281,846	-		IAI47_10805	0.51	-1.0
2,281,864	+		IAI47_10805	0.53	-1.3
2,281,864	+		IAI47_10805	0.53	-1.2
2,281,960	+		IAI47_10805	0.61	-0.5
2,281,960	+		IAI47_10805	0.61	-2.3
2,281,960	+		IAI47_10805	0.61	-0.3
2,281,960	+		IAI47_10805	0.61	-0.9
2,281,960	+		IAI47_10805	0.61	+0.2
2,281,961	-		IAI47_10805	0.61	+0.2
2,281,961	-		IAI47_10805	0.61	-1.6
2,281,961	-		IAI47_10805	0.61	-1.2
2,281,961	-		IAI47_10805	0.61	-2.9
2,281,961	-		IAI47_10805	0.61	-0.6
2,281,961	-		IAI47_10805	0.61	-2.2
2,281,961	-		IAI47_10805	0.61	-1.1
2,281,961	-		IAI47_10805	0.61	-1.6
2,281,988	+		IAI47_10805	0.63	-1.8
2,281,988	+		IAI47_10805	0.63	+0.5
2,281,989	-		IAI47_10805	0.63	+0.2
2,281,989	-		IAI47_10805	0.63	-2.1
2,282,058	+		IAI47_10805	0.69	+0.8
2,282,058	+		IAI47_10805	0.69	-1.3
2,282,058	+		IAI47_10805	0.69	-1.3
2,282,059	-		IAI47_10805	0.69	-1.8
2,282,062	+		IAI47_10805	0.69	-0.8
2,282,062	+		IAI47_10805	0.69	-1.3
2,282,062	+		IAI47_10805	0.69	+0.7
2,282,062	+		IAI47_10805	0.69	-1.3
2,282,062	+		IAI47_10805	0.69	-2.1
2,282,063	-		IAI47_10805	0.69	-1.9
2,282,063	-		IAI47_10805	0.69	-1.8
2,282,063	-		IAI47_10805	0.69	-1.6
2,282,063	-		IAI47_10805	0.69	-2.2
2,282,063	-		IAI47_10805	0.69	-2.1
2,282,195	+		IAI47_10805	0.80	-1.9
2,282,196	-		IAI47_10805	0.80	-2.2
2,282,252	+		IAI47_10805	0.85	-1.3
2,282,252	+		IAI47_10805	0.85	-1.6
2,282,252	+		IAI47_10805	0.85	-0.8
2,282,252	+		IAI47_10805	0.85	-1.1
2,282,253	-		IAI47_10805	0.85	-0.3
2,282,282	+		IAI47_10805	0.87	-1.8
2,282,294	+		IAI47_10805	0.88	-0.1
2,282,311	-		IAI47_10805	0.90	-0.3
2,282,424	+				-1.8
2,282,425	-				-2.1
2,282,425	-				-0.2
2,282,447	+				-0.8
2,282,459	+				-0.5
2,282,465	+				-1.2
2,282,466	-				+0.4
2,282,496	-				+0.4
2,282,525	-				-0.2
2,282,548	+				-1.8
2,282,580	-				+0.6
2,282,580	-				+1.8
2,282,592	+				+0.3
2,282,592	+				+0.2
2,282,622	+				+0.6
2,282,623	-				+0.8
2,282,637	+				-0.3
2,282,637	+				+0.7
2,282,638	-				+0.9
2,282,648	-				+0.8
2,282,701	-				-0.3
2,282,742	+				-1.8
2,282,742	+				-0.6
2,282,742	+				+0.2
2,282,742	+				-2.8
2,282,742	+				-0.8
2,282,743	-				+0.2
2,282,755	+				+1.2
2,282,755	+				-1.1
2,282,755	+				-0.8
2,282,756	-				-1.4
2,282,756	-				-0.0
2,282,756	-				+0.2
2,282,756	-				+0.8
2,282,756	-				-0.6
2,282,765	+				-2.1
2,282,765	+				+0.7
2,282,766	-				+0.0
2,282,766	-				+0.5
2,282,791	+				-0.1
2,282,792	-				-0.3
2,282,792	-				+1.2
2,282,792	-				-1.9
2,282,857	-				-1.8
2,282,865	+		IAI47_10810	0.11	-1.2
2,282,866	-		IAI47_10810	0.11	-1.2
2,282,866	-		IAI47_10810	0.11	-1.9
2,282,866	-		IAI47_10810	0.11	-0.0
2,282,926	+		IAI47_10810	0.16	-1.3
2,282,926	+		IAI47_10810	0.16	-1.1
2,282,926	+		IAI47_10810	0.16	-0.9
2,282,926	+		IAI47_10810	0.16	+1.8
2,282,926	+		IAI47_10810	0.16	+1.5
2,282,926	+		IAI47_10810	0.16	-0.9
2,282,926	+		IAI47_10810	0.16	-0.5
2,282,926	+		IAI47_10810	0.16	-0.8
2,282,926	+		IAI47_10810	0.16	+0.1
2,282,926	+		IAI47_10810	0.16	-0.2
2,282,926	+		IAI47_10810	0.16	+0.2
2,282,926	+		IAI47_10810	0.16	-0.3
2,282,926	+		IAI47_10810	0.16	+0.0
2,282,926	+		IAI47_10810	0.16	+0.7
2,282,926	+		IAI47_10810	0.16	-0.1
2,282,926	+		IAI47_10810	0.16	-0.0
2,282,926	+		IAI47_10810	0.16	-1.4
2,282,926	+		IAI47_10810	0.16	+0.7
2,282,926	+		IAI47_10810	0.16	+1.5
2,282,926	+		IAI47_10810	0.16	-0.8
2,282,926	+		IAI47_10810	0.16	+0.6
2,282,927	-		IAI47_10810	0.16	+1.1
2,282,927	-		IAI47_10810	0.16	-1.5
2,282,927	-		IAI47_10810	0.16	-0.3
2,282,927	-		IAI47_10810	0.16	+0.7
2,282,927	-		IAI47_10810	0.16	-1.2
2,282,927	-		IAI47_10810	0.16	+0.4
2,282,927	-		IAI47_10810	0.16	+1.8
2,282,927	-		IAI47_10810	0.16	-0.0
2,282,928	+		IAI47_10810	0.16	-0.6
2,282,928	+		IAI47_10810	0.16	-2.1
2,282,928	+		IAI47_10810	0.16	+0.2
2,282,929	-		IAI47_10810	0.16	-1.3
2,282,929	-		IAI47_10810	0.16	-1.8
2,282,929	-		IAI47_10810	0.16	-1.3
2,282,961	+		IAI47_10810	0.19	+1.2
2,282,961	+		IAI47_10810	0.19	-0.8
2,282,961	+		IAI47_10810	0.19	-0.9
2,282,961	+		IAI47_10810	0.19	-0.8
2,282,962	-		IAI47_10810	0.19	+0.8
2,282,962	-		IAI47_10810	0.19	-2.6
2,282,962	-		IAI47_10810	0.19	-0.5
2,282,962	-		IAI47_10810	0.19	+0.4
2,282,978	+		IAI47_10810	0.20	+1.2
2,282,978	+		IAI47_10810	0.20	+0.1
2,282,979	-		IAI47_10810	0.21	-0.0
2,282,979	-		IAI47_10810	0.21	-0.2
2,282,982	+		IAI47_10810	0.21	+0.2
2,282,982	+		IAI47_10810	0.21	-0.2
2,282,982	+		IAI47_10810	0.21	-0.2
2,282,982	+		IAI47_10810	0.21	+1.2
2,282,982	+		IAI47_10810	0.21	-0.8
2,282,982	+		IAI47_10810	0.21	+2.7
2,282,982	+		IAI47_10810	0.21	-2.3
2,282,983	-		IAI47_10810	0.21	-0.4
2,282,983	-		IAI47_10810	0.21	+0.1
2,282,983	-		IAI47_10810	0.21	-1.3
2,282,988	+		IAI47_10810	0.21	-0.2
2,282,989	-		IAI47_10810	0.21	-1.8
2,283,018	+		IAI47_10810	0.24	-0.2
2,283,018	+		IAI47_10810	0.24	-1.4
2,283,019	-		IAI47_10810	0.24	-1.8
2,283,025	-		IAI47_10810	0.25	+1.6
2,283,025	-		IAI47_10810	0.25	-0.9
2,283,025	-		IAI47_10810	0.25	-0.8
2,283,025	-		IAI47_10810	0.25	+0.2
2,283,025	-		IAI47_10810	0.25	-0.2
2,283,100	+		IAI47_10810	0.31	+0.2
2,283,100	+		IAI47_10810	0.31	-1.1
2,283,100	+		IAI47_10810	0.31	+0.1
2,283,101	-		IAI47_10810	0.31	-0.3
2,283,142	+		IAI47_10810	0.35	+0.2
2,283,142	+		IAI47_10810	0.35	+0.6
2,283,142	+		IAI47_10810	0.35	-0.8
2,283,142	+		IAI47_10810	0.35	+0.7
2,283,142	+		IAI47_10810	0.35	-0.6
2,283,143	-		IAI47_10810	0.35	-1.3
2,283,143	-		IAI47_10810	0.35	-0.8
2,283,143	-		IAI47_10810	0.35	-1.6
2,283,143	-		IAI47_10810	0.35	+0.4
2,283,143	-		IAI47_10810	0.35	-1.3
2,283,144	+		IAI47_10810	0.35	-0.0
2,283,144	+		IAI47_10810	0.35	+0.7
2,283,144	+		IAI47_10810	0.35	+0.2
2,283,144	+		IAI47_10810	0.35	-1.1
2,283,144	+		IAI47_10810	0.35	+1.8
2,283,144	+		IAI47_10810	0.35	+0.2
2,283,144	+		IAI47_10810	0.35	+0.0
2,283,144	+		IAI47_10810	0.35	-0.4
2,283,144	+		IAI47_10810	0.35	-0.6
2,283,144	+		IAI47_10810	0.35	-2.1
2,283,144	+		IAI47_10810	0.35	+0.5
2,283,145	-		IAI47_10810	0.35	+1.8
2,283,145	-		IAI47_10810	0.35	-0.8
2,283,145	-		IAI47_10810	0.35	-1.0
2,283,145	-		IAI47_10810	0.35	+0.5
2,283,145	-		IAI47_10810	0.35	-1.6
2,283,145	-		IAI47_10810	0.35	-1.8
2,283,145	-		IAI47_10810	0.35	-0.8
2,283,145	-		IAI47_10810	0.35	-0.3
2,283,152	-		IAI47_10810	0.36	-1.3
2,283,152	-		IAI47_10810	0.36	+0.5
2,283,213	+		IAI47_10810	0.41	+2.1
2,283,214	-		IAI47_10810	0.41	+0.8
2,283,214	-		IAI47_10810	0.41	+1.1
2,283,231	-		IAI47_10810	0.42	+1.6
2,283,307	+		IAI47_10810	0.49	+0.5
2,283,308	-		IAI47_10810	0.49	-0.3
2,283,308	-		IAI47_10810	0.49	-2.3
2,283,380	+		IAI47_10810	0.55	-0.3
2,283,381	-		IAI47_10810	0.56	-0.3