Strain Fitness in Pantoea sp. MT58 around IAI47_07470

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
1,577,505	+				+0.7
1,577,505	+				-0.5
1,577,505	+				+0.7
1,577,505	+				-0.2
1,577,505	+				+1.2
1,577,506	-				+0.9
1,577,506	-				-0.7
1,577,506	-				-1.3
1,577,554	+				-0.0
1,577,554	+				-0.4
1,577,554	+				+1.8
1,577,554	+				+2.1
1,577,554	+				-1.4
1,577,555	-				+0.2
1,577,555	-				-0.1
1,577,555	-				+0.1
1,577,555	-				+0.7
1,577,555	-				-1.0
1,577,555	-				-1.5
1,577,555	-				-1.6
1,577,648	+		IAI47_07465	0.18	+0.3
1,577,648	+		IAI47_07465	0.18	+0.5
1,577,649	-		IAI47_07465	0.18	-0.5
1,577,649	-		IAI47_07465	0.18	+1.1
1,577,649	-		IAI47_07465	0.18	+0.2
1,577,680	+		IAI47_07465	0.22	+0.7
1,577,680	+		IAI47_07465	0.22	-1.2
1,577,680	+		IAI47_07465	0.22	+0.6
1,577,681	-		IAI47_07465	0.22	-2.5
1,577,681	-		IAI47_07465	0.22	+0.3
1,577,681	-		IAI47_07465	0.22	+2.7
1,577,694	+		IAI47_07465	0.23	+1.1
1,577,695	-		IAI47_07465	0.23	-0.1
1,577,695	-		IAI47_07465	0.23	-0.0
1,577,695	-		IAI47_07465	0.23	+0.3
1,577,758	+		IAI47_07465	0.31	+0.3
1,577,758	+		IAI47_07465	0.31	-0.2
1,577,758	+		IAI47_07465	0.31	-1.1
1,577,758	+		IAI47_07465	0.31	-0.6
1,577,758	+		IAI47_07465	0.31	-0.2
1,577,759	-		IAI47_07465	0.31	+0.1
1,577,766	+		IAI47_07465	0.32	+1.2
1,577,766	+		IAI47_07465	0.32	+0.1
1,577,766	+		IAI47_07465	0.32	-1.8
1,577,767	-		IAI47_07465	0.32	+0.3
1,577,832	+		IAI47_07465	0.40	-1.9
1,577,833	-		IAI47_07465	0.40	-0.1
1,577,833	-		IAI47_07465	0.40	-0.2
1,577,833	-		IAI47_07465	0.40	+0.1
1,577,833	-		IAI47_07465	0.40	+0.7
1,577,875	+		IAI47_07465	0.45	-0.4
1,577,875	+		IAI47_07465	0.45	+0.1
1,577,876	-		IAI47_07465	0.45	-0.5
1,577,901	+		IAI47_07465	0.48	+0.1
1,577,901	+		IAI47_07465	0.48	+0.2
1,577,901	+		IAI47_07465	0.48	-0.1
1,577,902	-		IAI47_07465	0.48	-0.4
1,577,902	-		IAI47_07465	0.48	-0.1
1,577,902	-		IAI47_07465	0.48	-0.5
1,577,902	-		IAI47_07465	0.48	-0.1
1,577,973	+		IAI47_07465	0.57	-0.5
1,577,973	+		IAI47_07465	0.57	+0.4
1,577,974	-		IAI47_07465	0.57	+0.8
1,577,978	+		IAI47_07465	0.57	-0.1
1,577,978	+		IAI47_07465	0.57	+2.1
1,577,978	+		IAI47_07465	0.57	+0.9
1,577,978	+		IAI47_07465	0.57	+0.3
1,577,978	+		IAI47_07465	0.57	-0.8
1,577,979	-		IAI47_07465	0.57	+1.7
1,577,979	-		IAI47_07465	0.57	+0.3
1,577,979	-		IAI47_07465	0.57	+0.9
1,578,060	-		IAI47_07465	0.67	-0.3
1,578,067	+		IAI47_07465	0.68	+1.8
1,578,067	+		IAI47_07465	0.68	+0.1
1,578,067	+		IAI47_07465	0.68	+0.1
1,578,068	-		IAI47_07465	0.68	+0.1
1,578,068	-		IAI47_07465	0.68	+0.3
1,578,068	-		IAI47_07465	0.68	-1.1
1,578,077	+		IAI47_07465	0.69	+1.1
1,578,077	+		IAI47_07465	0.69	+0.1
1,578,078	-		IAI47_07465	0.69	-0.4
1,578,109	+		IAI47_07465	0.73	-0.0
1,578,109	+		IAI47_07465	0.73	-0.1
1,578,109	+		IAI47_07465	0.73	+0.4
1,578,109	+		IAI47_07465	0.73	+0.8
1,578,109	+		IAI47_07465	0.73	+0.6
1,578,109	+		IAI47_07465	0.73	-0.1
1,578,109	+		IAI47_07465	0.73	-0.1
1,578,109	+		IAI47_07465	0.73	+0.3
1,578,110	-		IAI47_07465	0.73	-1.7
1,578,110	-		IAI47_07465	0.73	+0.4
1,578,110	-		IAI47_07465	0.73	+1.2
1,578,110	-		IAI47_07465	0.73	+0.1
1,578,110	-		IAI47_07465	0.73	+1.9
1,578,110	-		IAI47_07465	0.73	+0.5
1,578,110	-		IAI47_07465	0.73	-0.8
1,578,110	-		IAI47_07465	0.73	-1.9
1,578,110	-		IAI47_07465	0.73	+0.1
1,578,110	-		IAI47_07465	0.73	-1.2
1,578,179	+		IAI47_07465	0.81	-0.6
1,578,179	+		IAI47_07465	0.81	-0.3
1,578,180	-		IAI47_07465	0.81	-0.5
1,578,180	-		IAI47_07465	0.81	+1.3
1,578,270	+				+0.3
1,578,270	+				+0.0
1,578,270	+				-0.9
1,578,270	+				-0.2
1,578,270	+				+1.7
1,578,270	+				+0.6
1,578,270	+				-2.1
1,578,271	-				-0.2
1,578,271	-				-0.5
1,578,271	-				+1.4
1,578,274	+				-0.7
1,578,276	+				-1.1
1,578,276	+				-0.9
1,578,277	-				+0.1
1,578,277	-				+0.6
1,578,277	-				-0.8
1,578,280	+				-0.3
1,578,280	+				-0.4
1,578,280	+				-0.7
1,578,280	+				+0.9
1,578,280	+				-0.6
1,578,281	-				-0.0
1,578,281	-				-0.9
1,578,281	-				+0.9
1,578,281	-				-1.7
1,578,281	-				-0.7
1,578,288	+				+0.3
1,578,289	-				+0.2
1,578,335	-				-0.3
1,578,391	+				+0.9
1,578,470	+				+0.1
1,578,471	-				-1.0
1,578,471	-				-1.2
1,578,477	-				-1.1
1,578,477	-				-0.4
1,578,501	-				+1.7
1,578,505	-				+0.6
1,578,505	-				-0.5
1,578,505	-				+1.1
1,578,579	+		IAI47_07470	0.34	-1.1
1,578,590	+		IAI47_07470	0.39	+1.4
1,578,593	-		IAI47_07470	0.40	-0.0
1,578,630	-		IAI47_07470	0.57	-0.6
1,578,693	+		IAI47_07470	0.86	+1.7
1,578,721	+				+0.1
1,578,744	+				+0.3
1,578,852	-		IAI47_07475	0.34	-0.5
1,578,957	+		IAI47_07475	0.68	+0.4
1,579,078	-				+0.4
1,579,176	-				+1.3
1,579,197	+				-0.2
1,579,235	-		IAI47_07480	0.14	-1.1
1,579,235	-		IAI47_07480	0.14	+0.7
1,579,296	+		IAI47_07480	0.35	-0.3
1,579,325	-		IAI47_07480	0.45	+2.4
1,579,447	-		IAI47_07480	0.86	+0.3
1,579,460	+				+1.4
1,579,499	+				+1.2
1,579,499	+				+0.4
1,579,500	-				+0.5
1,579,524	-				+2.0
1,579,560	-				+2.1
1,579,603	-				+0.3
1,579,603	-				+0.7
1,579,660	+		IAI47_07485	0.15	-1.5
1,579,660	+		IAI47_07485	0.15	+1.7
1,579,661	-		IAI47_07485	0.16	-1.5
1,579,666	+		IAI47_07485	0.17	-0.1