Strain Fitness in Pantoea sp. MT58 around IAI47_11915

Experiment: Ying_Nucleobase14 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 3
2,520,578	+		IAI47_11905	0.50	-2.5
2,520,578	+		IAI47_11905	0.50	-0.4
2,520,578	+		IAI47_11905	0.50	+0.3
2,520,578	+		IAI47_11905	0.50	+0.3
2,520,578	+		IAI47_11905	0.50	-0.3
2,520,578	+		IAI47_11905	0.50	+0.3
2,520,579	-		IAI47_11905	0.50	-0.9
2,520,579	-		IAI47_11905	0.50	+0.7
2,520,579	-		IAI47_11905	0.50	+0.9
2,520,579	-		IAI47_11905	0.50	+0.1
2,520,579	-		IAI47_11905	0.50	-0.6
2,520,579	-		IAI47_11905	0.50	-0.4
2,520,579	-		IAI47_11905	0.50	+1.5
2,520,579	-		IAI47_11905	0.50	-0.1
2,520,579	-		IAI47_11905	0.50	-0.6
2,520,581	+		IAI47_11905	0.50	+0.2
2,520,581	+		IAI47_11905	0.50	+2.3
2,520,581	+		IAI47_11905	0.50	-0.5
2,520,581	+		IAI47_11905	0.50	-1.0
2,520,581	+		IAI47_11905	0.50	-0.5
2,520,581	+		IAI47_11905	0.50	-0.3
2,520,581	+		IAI47_11905	0.50	+0.3
2,520,581	+		IAI47_11905	0.50	-1.3
2,520,581	+		IAI47_11905	0.50	+1.1
2,520,581	+		IAI47_11905	0.50	+0.1
2,520,582	-		IAI47_11905	0.50	-1.7
2,520,582	-		IAI47_11905	0.50	+0.5
2,520,582	-		IAI47_11905	0.50	+0.5
2,520,582	-		IAI47_11905	0.50	+0.7
2,520,582	-		IAI47_11905	0.50	-0.4
2,520,582	-		IAI47_11905	0.50	+1.0
2,520,582	-		IAI47_11905	0.50	+1.0
2,520,582	-		IAI47_11905	0.50	+0.8
2,520,582	-		IAI47_11905	0.50	+0.3
2,520,582	-		IAI47_11905	0.50	-0.1
2,520,582	-		IAI47_11905	0.50	-0.3
2,520,591	+		IAI47_11905	0.51	-0.5
2,520,591	+		IAI47_11905	0.51	+0.1
2,520,592	-		IAI47_11905	0.52	-0.4
2,520,592	-		IAI47_11905	0.52	+0.2
2,520,592	-		IAI47_11905	0.52	-0.3
2,520,592	-		IAI47_11905	0.52	-0.7
2,520,592	-		IAI47_11905	0.52	+1.3
2,520,592	-		IAI47_11905	0.52	-1.3
2,520,646	+		IAI47_11905	0.60	-0.4
2,520,647	-		IAI47_11905	0.60	+0.6
2,520,647	-		IAI47_11905	0.60	+1.2
2,520,675	+		IAI47_11905	0.64	+0.3
2,520,675	+		IAI47_11905	0.64	-0.7
2,520,734	-		IAI47_11905	0.73	-0.6
2,520,770	+		IAI47_11905	0.78	-0.5
2,520,770	+		IAI47_11905	0.78	-0.7
2,520,770	+		IAI47_11905	0.78	-0.4
2,520,770	+		IAI47_11905	0.78	-1.6
2,520,770	+		IAI47_11905	0.78	+0.3
2,520,771	-		IAI47_11905	0.78	+0.9
2,520,771	-		IAI47_11905	0.78	+0.3
2,520,771	-		IAI47_11905	0.78	-0.0
2,520,771	-		IAI47_11905	0.78	+0.7
2,520,771	-		IAI47_11905	0.78	+2.1
2,520,771	-		IAI47_11905	0.78	+2.0
2,520,771	-		IAI47_11905	0.78	-0.5
2,520,771	-		IAI47_11905	0.78	-1.7
2,520,771	-		IAI47_11905	0.78	-0.5
2,520,771	-		IAI47_11905	0.78	-1.8
2,520,771	-		IAI47_11905	0.78	+0.3
2,520,771	-		IAI47_11905	0.78	-0.6
2,520,771	-		IAI47_11905	0.78	+0.3
2,520,771	-		IAI47_11905	0.78	+1.4
2,520,793	-		IAI47_11905	0.82	-0.7
2,520,811	+		IAI47_11905	0.84	+0.4
2,520,828	+		IAI47_11905	0.87	-0.3
2,520,828	+		IAI47_11905	0.87	+1.0
2,520,829	-		IAI47_11905	0.87	-0.7
2,520,834	+		IAI47_11905	0.88	+0.6
2,520,835	-		IAI47_11905	0.88	-0.3
2,520,835	-		IAI47_11905	0.88	-0.4
2,520,857	+				+0.6
2,520,857	+				+0.3
2,520,857	+				-1.2
2,520,857	+				-0.5
2,520,858	-				+1.3
2,520,858	-				+0.9
2,520,858	-				-0.3
2,520,904	+				-0.0
2,520,905	-				+0.0
2,520,905	-				-0.6
2,520,905	-				+0.3
2,520,905	-				+1.0
2,520,929	+				+0.5
2,520,930	-				+0.1
2,520,966	+				+1.0
2,520,967	-				-0.0
2,520,978	+				+0.0
2,520,979	-				+2.3
2,520,979	-				+1.3
2,521,022	+		IAI47_11910	0.13	+0.6
2,521,022	+		IAI47_11910	0.13	-0.5
2,521,023	-		IAI47_11910	0.13	+1.0
2,521,023	-		IAI47_11910	0.13	-0.4
2,521,036	-		IAI47_11910	0.16	-1.3
2,521,117	+		IAI47_11910	0.33	+0.1
2,521,117	+		IAI47_11910	0.33	+0.1
2,521,117	+		IAI47_11910	0.33	+0.4
2,521,117	+		IAI47_11910	0.33	+0.6
2,521,118	-		IAI47_11910	0.33	+0.2
2,521,118	-		IAI47_11910	0.33	+0.8
2,521,151	-		IAI47_11910	0.40	+0.0
2,521,151	-		IAI47_11910	0.40	+0.3
2,521,151	-		IAI47_11910	0.40	-0.7
2,521,151	-		IAI47_11910	0.40	+0.3
2,521,151	-		IAI47_11910	0.40	-0.5
2,521,164	-		IAI47_11910	0.43	+0.3
2,521,188	+		IAI47_11910	0.48	+0.3
2,521,188	+		IAI47_11910	0.48	-1.1
2,521,189	-		IAI47_11910	0.48	+1.3
2,521,340	+		IAI47_11910	0.80	-0.3
2,521,341	-		IAI47_11910	0.80	-0.4
2,521,341	-		IAI47_11910	0.80	-0.7
2,521,373	+		IAI47_11910	0.87	+0.8
2,521,374	-		IAI47_11910	0.87	+0.6
2,521,374	-		IAI47_11910	0.87	-1.1
2,521,374	-		IAI47_11910	0.87	+2.1
2,521,374	-		IAI47_11910	0.87	-0.7
2,521,435	+				+0.2
2,521,435	+				-0.6
2,521,462	+				-0.3
2,522,617	+				-0.3
2,522,617	+				+1.5
2,522,617	+				-1.0
2,522,627	+				+0.7
2,522,769	+		IAI47_11920	0.21	+1.1
2,522,769	+		IAI47_11920	0.21	-0.5
2,522,799	+		IAI47_11920	0.26	+1.9
2,522,893	+		IAI47_11920	0.41	+0.3
2,522,893	+		IAI47_11920	0.41	-0.6
2,522,893	+		IAI47_11920	0.41	-0.2
2,522,895	+		IAI47_11920	0.41	-0.1
2,522,895	+		IAI47_11920	0.41	+0.8
2,522,895	+		IAI47_11920	0.41	+1.9
2,522,895	+		IAI47_11920	0.41	-0.7
2,522,928	+		IAI47_11920	0.46	-2.0
2,522,970	+		IAI47_11920	0.53	-0.7
2,522,970	+		IAI47_11920	0.53	+2.0
2,522,970	+		IAI47_11920	0.53	-0.4
2,523,020	+		IAI47_11920	0.60	+1.0
2,523,020	+		IAI47_11920	0.60	-0.6
2,523,020	+		IAI47_11920	0.60	-0.4
2,523,020	+		IAI47_11920	0.60	+2.9
2,523,020	+		IAI47_11920	0.60	-0.1
2,523,043	+		IAI47_11920	0.64	-0.4
2,523,043	+		IAI47_11920	0.64	+0.2
2,523,043	+		IAI47_11920	0.64	-0.5
2,523,043	+		IAI47_11920	0.64	-0.1
2,523,043	+		IAI47_11920	0.64	+0.6
2,523,043	+		IAI47_11920	0.64	+0.3
2,523,043	+		IAI47_11920	0.64	-0.9
2,523,043	+		IAI47_11920	0.64	-1.3
2,523,043	+		IAI47_11920	0.64	+1.0
2,523,043	+		IAI47_11920	0.64	-0.6
2,523,043	+		IAI47_11920	0.64	+0.1
2,523,043	+		IAI47_11920	0.64	-0.4
2,523,043	+		IAI47_11920	0.64	-0.3
2,523,043	+		IAI47_11920	0.64	-0.4
2,523,043	+		IAI47_11920	0.64	-0.7
2,523,043	+		IAI47_11920	0.64	+0.6
2,523,043	+		IAI47_11920	0.64	-0.3
2,523,043	+		IAI47_11920	0.64	+0.1
2,523,043	+		IAI47_11920	0.64	-1.0
2,523,043	+		IAI47_11920	0.64	+1.9
2,523,043	+		IAI47_11920	0.64	-0.4
2,523,043	+		IAI47_11920	0.64	+1.0
2,523,047	+		IAI47_11920	0.65	+0.8
2,523,047	+		IAI47_11920	0.65	+0.3
2,523,047	+		IAI47_11920	0.65	-0.3
2,523,047	+		IAI47_11920	0.65	-0.1
2,523,047	+		IAI47_11920	0.65	+1.7
2,523,047	+		IAI47_11920	0.65	-1.1
2,523,047	+		IAI47_11920	0.65	+0.6
2,523,075	+		IAI47_11920	0.69	+0.6
2,523,075	+		IAI47_11920	0.69	+0.6
2,523,075	+		IAI47_11920	0.69	+0.7
2,523,075	+		IAI47_11920	0.69	+2.6
2,523,075	+		IAI47_11920	0.69	+0.4
2,523,111	+		IAI47_11920	0.75	+0.3
2,523,111	+		IAI47_11920	0.75	-0.5
2,523,111	+		IAI47_11920	0.75	+0.1
2,523,126	+		IAI47_11920	0.77	+1.0
2,523,126	+		IAI47_11920	0.77	-0.3
2,523,126	+		IAI47_11920	0.77	-0.1
2,523,126	+		IAI47_11920	0.77	+0.0
2,523,126	+		IAI47_11920	0.77	+0.9
2,523,146	+		IAI47_11920	0.80	+0.9
2,523,146	+		IAI47_11920	0.80	+0.8
2,523,146	+		IAI47_11920	0.80	+0.9
2,523,153	+		IAI47_11920	0.81	+1.0
2,523,153	+		IAI47_11920	0.81	+0.6
2,523,271	+				-2.0
2,523,271	+				+0.3