Strain Fitness in Pantoea sp. MT58 around IAI47_18530

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
3,942,296	-				+0.1
3,942,305	-				-0.7
3,942,305	-				-1.4
3,942,305	-				+0.7
3,942,305	-				+1.3
3,942,305	-				-0.1
3,942,435	-				-1.5
3,942,435	-				-0.7
3,942,435	-				-0.4
3,942,435	-				-0.7
3,942,435	-				-0.4
3,942,435	-				+0.1
3,942,441	-				-0.7
3,942,441	-				-0.4
3,942,441	-				-1.3
3,942,443	-				-0.0
3,942,443	-				-2.1
3,942,443	-				-0.2
3,942,443	-				-1.7
3,942,443	-				-0.1
3,942,481	-				+0.7
3,942,488	-				+1.3
3,942,488	-				+0.5
3,942,488	-				-1.8
3,942,488	-				-0.1
3,942,488	-				+1.1
3,942,488	-				-0.7
3,942,488	-				+0.8
3,942,492	-				-0.4
3,942,492	-				+0.3
3,942,499	-				+0.5
3,942,499	-				-0.9
3,942,499	-				+2.9
3,942,499	-				+2.1
3,942,507	-				+0.3
3,942,521	-				-0.1
3,942,526	-				-0.5
3,942,526	-				-0.5
3,942,526	-				-0.4
3,942,562	-				-0.7
3,942,595	+				-0.7
3,942,595	+				-2.9
3,942,595	+				-0.1
3,942,595	+				+0.2
3,942,595	+				-1.4
3,942,596	-				-0.3
3,942,713	-		IAI47_18530	0.36	+0.3
3,942,775	+		IAI47_18530	0.54	-3.3
3,942,776	-		IAI47_18530	0.55	-3.2
3,942,854	+		IAI47_18530	0.78	+0.3
3,942,855	-		IAI47_18530	0.78	-3.7
3,942,945	-				-0.7
3,942,945	-				-0.3
3,942,968	+				-2.5
3,942,969	-				+0.2
3,942,969	-				+0.2
3,942,969	-				+1.0
3,942,969	-				-0.6
3,942,970	+				-2.0
3,942,989	+				-0.7
3,942,990	-				-2.0
3,943,001	+				-0.7
3,943,019	+				-0.4
3,943,023	-				-0.8
3,943,030	+				-1.4
3,943,035	+				+1.3
3,943,043	+				+1.0
3,943,043	+				+0.7
3,943,044	-				-1.7
3,943,044	-				-2.3
3,943,044	-				-1.0
3,943,044	-				-0.7
3,943,121	+				-2.9
3,943,170	-				-1.5
3,943,307	-		IAI47_18535	0.20	-1.3
3,943,399	-		IAI47_18535	0.27	-0.7
3,943,399	-		IAI47_18535	0.27	-0.4
3,943,399	-		IAI47_18535	0.27	+1.3
3,943,413	+		IAI47_18535	0.29	-0.1
3,943,451	+		IAI47_18535	0.31	+0.3
3,943,451	+		IAI47_18535	0.31	-1.4
3,943,451	+		IAI47_18535	0.31	-1.2
3,943,452	-		IAI47_18535	0.32	-0.7
3,943,506	-		IAI47_18535	0.36	-0.7
3,943,506	-		IAI47_18535	0.36	-1.3
3,943,517	+		IAI47_18535	0.37	-1.5
3,943,517	+		IAI47_18535	0.37	-1.2
3,943,517	+		IAI47_18535	0.37	-0.9
3,943,517	+		IAI47_18535	0.37	+0.3
3,943,517	+		IAI47_18535	0.37	-3.5
3,943,517	+		IAI47_18535	0.37	-1.3
3,943,517	+		IAI47_18535	0.37	-1.5
3,943,526	+		IAI47_18535	0.37	+0.3
3,943,526	+		IAI47_18535	0.37	-1.7
3,943,526	+		IAI47_18535	0.37	-1.4
3,943,526	+		IAI47_18535	0.37	+0.3
3,943,527	-		IAI47_18535	0.37	-0.9
3,943,568	+		IAI47_18535	0.41	-2.7
3,943,568	+		IAI47_18535	0.41	-0.5
3,943,571	+		IAI47_18535	0.41	+0.9
3,943,571	+		IAI47_18535	0.41	+0.0
3,943,572	-		IAI47_18535	0.41	-1.3
3,943,577	+		IAI47_18535	0.41	-0.3
3,943,578	-		IAI47_18535	0.41	+0.3
3,943,650	+		IAI47_18535	0.47	-1.6
3,943,650	+		IAI47_18535	0.47	-1.2
3,943,651	-		IAI47_18535	0.47	-0.1
3,943,695	+		IAI47_18535	0.50	-1.0
3,943,695	+		IAI47_18535	0.50	+0.3
3,943,695	+		IAI47_18535	0.50	-0.8
3,943,695	+		IAI47_18535	0.50	-1.3
3,943,695	+		IAI47_18535	0.50	-0.7
3,943,696	-		IAI47_18535	0.50	-0.3
3,943,696	-		IAI47_18535	0.50	-1.0
3,943,696	-		IAI47_18535	0.50	+0.3
3,943,696	-		IAI47_18535	0.50	-0.7
3,943,696	-		IAI47_18535	0.50	-0.7
3,943,752	+		IAI47_18535	0.55	-0.9
3,943,753	-		IAI47_18535	0.55	-0.7
3,943,760	+		IAI47_18535	0.55	-0.9
3,943,760	+		IAI47_18535	0.55	-0.5