Strain Fitness in Pantoea sp. MT58 around IAI47_12130

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
2,568,938	+				+0.5
2,568,938	+				-1.3
2,568,938	+				+1.0
2,568,939	-				-2.0
2,568,939	-				-2.0
2,568,939	-				-1.0
2,568,939	-				-0.6
2,568,939	-				+0.7
2,568,939	-				+1.1
2,568,980	-				-0.3
2,568,980	-				-1.4
2,568,990	+				-0.6
2,568,991	-				-0.3
2,569,016	-				-0.9
2,569,016	-				+0.0
2,569,056	+				+1.6
2,569,056	+				+2.0
2,569,056	+				+1.8
2,569,056	+				+1.7
2,569,057	-				+2.7
2,569,088	+		IAI47_12125	0.13	+2.0
2,569,137	+		IAI47_12125	0.18	+0.4
2,569,138	-		IAI47_12125	0.18	+1.2
2,569,167	+		IAI47_12125	0.21	+2.5
2,569,167	+		IAI47_12125	0.21	+1.9
2,569,168	-		IAI47_12125	0.21	+1.3
2,569,168	-		IAI47_12125	0.21	+2.3
2,569,168	-		IAI47_12125	0.21	-0.7
2,569,168	-		IAI47_12125	0.21	+1.2
2,569,168	-		IAI47_12125	0.21	+0.5
2,569,188	+		IAI47_12125	0.23	+2.4
2,569,188	+		IAI47_12125	0.23	+2.0
2,569,188	+		IAI47_12125	0.23	+1.4
2,569,189	-		IAI47_12125	0.24	+1.4
2,569,195	+		IAI47_12125	0.24	+1.3
2,569,195	+		IAI47_12125	0.24	+2.3
2,569,195	+		IAI47_12125	0.24	+1.1
2,569,195	+		IAI47_12125	0.24	+1.2
2,569,195	+		IAI47_12125	0.24	+0.3
2,569,196	-		IAI47_12125	0.24	+1.4
2,569,196	-		IAI47_12125	0.24	+0.5
2,569,196	-		IAI47_12125	0.24	+0.9
2,569,197	+		IAI47_12125	0.24	+2.1
2,569,197	+		IAI47_12125	0.24	+1.2
2,569,197	+		IAI47_12125	0.24	+0.9
2,569,198	-		IAI47_12125	0.25	+1.4
2,569,198	-		IAI47_12125	0.25	+2.0
2,569,198	-		IAI47_12125	0.25	+1.2
2,569,243	-		IAI47_12125	0.29	+0.6
2,569,294	+		IAI47_12125	0.34	+1.2
2,569,311	+		IAI47_12125	0.36	+0.9
2,569,312	-		IAI47_12125	0.36	+2.0
2,569,312	-		IAI47_12125	0.36	+0.8
2,569,312	-		IAI47_12125	0.36	+0.8
2,569,513	+		IAI47_12125	0.57	+2.0
2,569,573	+		IAI47_12125	0.63	+0.1
2,569,574	-		IAI47_12125	0.64	+2.0
2,569,574	-		IAI47_12125	0.64	+1.6
2,569,582	+		IAI47_12125	0.64	+0.7
2,569,707	+		IAI47_12125	0.77	+1.6
2,569,707	+		IAI47_12125	0.77	+0.6
2,569,707	+		IAI47_12125	0.77	+1.0
2,569,707	+		IAI47_12125	0.77	+2.7
2,569,708	-		IAI47_12125	0.77	+2.0
2,569,708	-		IAI47_12125	0.77	+0.4
2,569,708	-		IAI47_12125	0.77	+0.8
2,569,708	-		IAI47_12125	0.77	+2.0
2,569,744	+		IAI47_12125	0.81	+1.6
2,569,744	+		IAI47_12125	0.81	+1.0
2,569,745	-		IAI47_12125	0.81	+0.4
2,569,775	-		IAI47_12125	0.84	+2.1
2,569,775	-		IAI47_12125	0.84	+0.8
2,569,775	-		IAI47_12125	0.84	+0.9
2,570,034	+				+2.4
2,570,034	+				+2.7
2,570,034	+				+1.4
2,570,056	-		IAI47_12130	0.12	+0.2
2,570,139	+		IAI47_12130	0.19	+1.5
2,570,139	+		IAI47_12130	0.19	+4.0
2,570,140	-		IAI47_12130	0.19	+0.7
2,570,232	+		IAI47_12130	0.28	+1.7
2,570,295	+		IAI47_12130	0.33	+2.0
2,570,295	+		IAI47_12130	0.33	+2.0
2,570,295	+		IAI47_12130	0.33	+1.9
2,570,295	+		IAI47_12130	0.33	-0.4
2,570,295	+		IAI47_12130	0.33	+1.8
2,570,295	+		IAI47_12130	0.33	+0.9
2,570,295	+		IAI47_12130	0.33	+1.7
2,570,295	+		IAI47_12130	0.33	+3.9
2,570,296	-		IAI47_12130	0.34	+1.7
2,570,296	-		IAI47_12130	0.34	+1.7
2,570,296	-		IAI47_12130	0.34	+1.3
2,570,296	-		IAI47_12130	0.34	+1.6
2,570,337	+		IAI47_12130	0.37	+1.4
2,570,337	+		IAI47_12130	0.37	+0.7
2,570,338	-		IAI47_12130	0.37	+1.2
2,570,338	-		IAI47_12130	0.37	+1.1
2,570,338	-		IAI47_12130	0.37	+1.6
2,570,340	+		IAI47_12130	0.37	+1.8
2,570,340	+		IAI47_12130	0.37	+3.2
2,570,340	+		IAI47_12130	0.37	+0.5
2,570,341	-		IAI47_12130	0.38	+1.6
2,570,341	-		IAI47_12130	0.38	+1.4
2,570,341	-		IAI47_12130	0.38	+2.0
2,570,364	+		IAI47_12130	0.40	+0.2
2,570,424	+		IAI47_12130	0.45	+0.9
2,570,424	+		IAI47_12130	0.45	+0.1
2,570,424	+		IAI47_12130	0.45	+0.5
2,570,425	-		IAI47_12130	0.45	+1.8
2,570,425	-		IAI47_12130	0.45	+1.2
2,570,425	-		IAI47_12130	0.45	+1.2
2,570,425	-		IAI47_12130	0.45	+1.2
2,570,425	-		IAI47_12130	0.45	+2.4
2,570,425	-		IAI47_12130	0.45	+0.5
2,570,425	-		IAI47_12130	0.45	+1.3
2,570,454	+		IAI47_12130	0.48	+1.2
2,570,455	-		IAI47_12130	0.48	+1.2
2,570,455	-		IAI47_12130	0.48	+1.6
2,570,455	-		IAI47_12130	0.48	+0.9
2,570,455	-		IAI47_12130	0.48	+1.1
2,570,509	+		IAI47_12130	0.53	+3.2
2,570,509	+		IAI47_12130	0.53	+0.9
2,570,510	-		IAI47_12130	0.53	+2.0
2,570,510	-		IAI47_12130	0.53	+1.4
2,570,510	-		IAI47_12130	0.53	+2.2
2,570,529	+		IAI47_12130	0.55	+0.9
2,570,529	+		IAI47_12130	0.55	+0.7
2,570,529	+		IAI47_12130	0.55	+0.8
2,570,529	+		IAI47_12130	0.55	+0.8
2,570,530	-		IAI47_12130	0.55	+2.0
2,570,530	-		IAI47_12130	0.55	-0.0
2,570,530	-		IAI47_12130	0.55	+0.6
2,570,601	+		IAI47_12130	0.61	+0.9
2,570,601	+		IAI47_12130	0.61	+1.5
2,570,601	+		IAI47_12130	0.61	+3.8
2,570,601	+		IAI47_12130	0.61	+0.2
2,570,601	+		IAI47_12130	0.61	+1.9
2,570,601	+		IAI47_12130	0.61	+1.4
2,570,601	+		IAI47_12130	0.61	+1.8
2,570,601	+		IAI47_12130	0.61	+2.9
2,570,601	+		IAI47_12130	0.61	+1.6
2,570,602	-		IAI47_12130	0.61	+2.5
2,570,602	-		IAI47_12130	0.61	+1.0
2,570,602	-		IAI47_12130	0.61	+1.5
2,570,602	-		IAI47_12130	0.61	+1.2
2,570,602	-		IAI47_12130	0.61	+1.6
2,570,602	-		IAI47_12130	0.61	+2.1
2,570,602	-		IAI47_12130	0.61	+4.2
2,570,604	+		IAI47_12130	0.61	+0.4
2,570,605	-		IAI47_12130	0.61	+1.1
2,570,631	+		IAI47_12130	0.64	+1.3
2,570,631	+		IAI47_12130	0.64	+2.0
2,570,656	+		IAI47_12130	0.66	+0.9
2,570,656	+		IAI47_12130	0.66	+1.6
2,570,657	-		IAI47_12130	0.66	+1.7
2,570,688	+		IAI47_12130	0.69	+1.3
2,570,808	+		IAI47_12130	0.80	+0.4
2,570,808	+		IAI47_12130	0.80	+0.6
2,570,808	+		IAI47_12130	0.80	+1.4
2,570,809	-		IAI47_12130	0.80	+1.4
2,570,809	-		IAI47_12130	0.80	+1.6
2,570,812	-		IAI47_12130	0.80	+1.4
2,570,848	-		IAI47_12130	0.83	+1.5
2,570,851	-		IAI47_12130	0.84	+0.9
2,570,851	-		IAI47_12130	0.84	+2.0
2,570,851	-		IAI47_12130	0.84	+0.6
2,570,948	-				+0.7
2,570,948	-				-0.8
2,571,023	-				+1.2
2,571,044	+				+0.6
2,571,044	+				+0.4
2,571,044	+				+2.6
2,571,045	-				+0.0
2,571,045	-				+0.9
2,571,045	-				-0.2
2,571,045	-				+0.4
2,571,045	-				+0.2
2,571,105	+				+1.7
2,571,105	+				+0.2
2,571,105	+				+1.6
2,571,105	+				+2.1
2,571,105	+				+1.8
2,571,106	-				+0.9
2,571,106	-				+2.5
2,571,106	-				+1.4
2,571,106	-				+1.3
2,571,107	+				+2.3
2,571,107	+				+2.0
2,571,107	+				+1.3
2,571,107	+				+1.4
2,571,107	+				+1.8
2,571,107	+				+1.4
2,571,107	+				+2.4
2,571,108	-				+1.7
2,571,108	-				-0.1
2,571,108	-				-0.2
2,571,108	-				-1.1
2,571,108	-				+2.0
2,571,122	+		IAI47_12135	0.11	+0.8
2,571,122	+		IAI47_12135	0.11	+1.3
2,571,123	-		IAI47_12135	0.11	+1.5
2,571,123	-		IAI47_12135	0.11	+3.3
2,571,130	-		IAI47_12135	0.12	+1.3
2,571,130	-		IAI47_12135	0.12	+1.3
2,571,150	+		IAI47_12135	0.15	+2.0
2,571,150	+		IAI47_12135	0.15	+1.8
2,571,151	-		IAI47_12135	0.15	+3.5
2,571,151	-		IAI47_12135	0.15	+1.7
2,571,151	-		IAI47_12135	0.15	+0.1
2,571,151	-		IAI47_12135	0.15	+1.1
2,571,151	-		IAI47_12135	0.15	+0.6
2,571,154	+		IAI47_12135	0.16	+2.1
2,571,155	-		IAI47_12135	0.16	+1.7
2,571,166	-		IAI47_12135	0.17	+1.8
2,571,228	+		IAI47_12135	0.26	+3.0
2,571,259	+		IAI47_12135	0.30	+0.2
2,571,259	+		IAI47_12135	0.30	+2.0
2,571,259	+		IAI47_12135	0.30	+1.7
2,571,259	+		IAI47_12135	0.30	+2.2
2,571,259	+		IAI47_12135	0.30	+2.2
2,571,259	+		IAI47_12135	0.30	+0.9
2,571,259	+		IAI47_12135	0.30	+1.5
2,571,260	-		IAI47_12135	0.31	+1.8
2,571,260	-		IAI47_12135	0.31	+0.1
2,571,260	-		IAI47_12135	0.31	+1.0
2,571,260	-		IAI47_12135	0.31	+0.8
2,571,260	-		IAI47_12135	0.31	+0.9
2,571,260	-		IAI47_12135	0.31	+1.0
2,571,260	-		IAI47_12135	0.31	+0.7
2,571,277	+		IAI47_12135	0.33	+1.5
2,571,278	-		IAI47_12135	0.33	+0.9
2,571,278	-		IAI47_12135	0.33	+1.9
2,571,278	-		IAI47_12135	0.33	+1.0
2,571,278	-		IAI47_12135	0.33	+1.8
2,571,278	-		IAI47_12135	0.33	+4.0
2,571,298	-		IAI47_12135	0.36	+0.4
2,571,315	+		IAI47_12135	0.38	+2.1
2,571,315	+		IAI47_12135	0.38	+4.4
2,571,315	+		IAI47_12135	0.38	+2.1
2,571,316	-		IAI47_12135	0.38	+0.4
2,571,316	-		IAI47_12135	0.38	+1.6
2,571,316	-		IAI47_12135	0.38	+1.1
2,571,318	+		IAI47_12135	0.39	+1.3
2,571,318	+		IAI47_12135	0.39	+3.0
2,571,318	+		IAI47_12135	0.39	+1.1
2,571,319	-		IAI47_12135	0.39	+0.9
2,571,319	-		IAI47_12135	0.39	+2.5
2,571,339	+		IAI47_12135	0.42	+1.2
2,571,340	-		IAI47_12135	0.42	+1.5
2,571,431	-		IAI47_12135	0.55	+1.6
2,571,432	+		IAI47_12135	0.55	+1.1
2,571,432	+		IAI47_12135	0.55	+0.6
2,571,433	-		IAI47_12135	0.55	+2.4
2,571,507	+		IAI47_12135	0.65	+1.8
2,571,507	+		IAI47_12135	0.65	+1.9
2,571,507	+		IAI47_12135	0.65	+1.2
2,571,507	+		IAI47_12135	0.65	+1.2
2,571,508	-		IAI47_12135	0.65	+2.0
2,571,531	+		IAI47_12135	0.69	+2.3
2,571,569	+		IAI47_12135	0.74	+2.0
2,571,569	+		IAI47_12135	0.74	+1.7
2,571,569	+		IAI47_12135	0.74	+0.8
2,571,570	-		IAI47_12135	0.74	+2.0
2,571,570	-		IAI47_12135	0.74	+1.2
2,571,570	-		IAI47_12135	0.74	+0.9
2,571,570	-		IAI47_12135	0.74	+2.0
2,571,570	-		IAI47_12135	0.74	+2.0
2,571,573	+		IAI47_12135	0.75	+2.2
2,571,573	+		IAI47_12135	0.75	+3.0
2,571,574	-		IAI47_12135	0.75	+1.7
2,571,574	-		IAI47_12135	0.75	+1.8
2,571,574	-		IAI47_12135	0.75	+1.3
2,571,595	+		IAI47_12135	0.78	+0.1
2,571,630	+		IAI47_12135	0.83	+1.2
2,571,630	+		IAI47_12135	0.83	+1.8
2,571,631	-		IAI47_12135	0.83	+1.0
2,571,631	-		IAI47_12135	0.83	+2.1
2,571,631	-		IAI47_12135	0.83	+1.4
2,571,631	-		IAI47_12135	0.83	+0.9
2,571,631	-		IAI47_12135	0.83	+2.2
2,571,631	-		IAI47_12135	0.83	+1.9
2,571,691	-				+2.6
2,571,715	+				+2.7
2,571,767	+				+1.1
2,571,767	+				+0.1
2,571,767	+				+2.0
2,571,767	+				+1.6
2,571,767	+				+0.2
2,571,768	-				+1.0
2,571,768	-				+1.2
2,571,768	-				+2.2
2,571,768	-				+0.6
2,571,768	-				+0.9
2,571,768	-				+0.5
2,571,770	+				+2.0
2,571,770	+				+0.8
2,571,770	+				+2.6
2,571,770	+				+1.6
2,571,770	+				+1.7
2,571,770	+				+0.9
2,571,770	+				+2.5
2,571,771	-				+0.7
2,571,771	-				+0.1
2,571,771	-				+0.4
2,571,771	-				+1.2
2,571,826	+				+1.4
2,571,826	+				+0.2
2,571,920	-		IAI47_12140	0.14	+0.6
2,571,944	+		IAI47_12140	0.17	+2.5
2,571,954	-		IAI47_12140	0.18	+1.2
2,571,954	-		IAI47_12140	0.18	+0.1