Strain Fitness in Pantoea sp. MT58 around IAI47_03660

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
761,383	-				-0.5
761,383	-				-0.0
761,383	-				-1.5
761,383	-				+0.5
761,383	-				+1.2
761,386	-				-1.5
761,386	-				-1.3
761,386	-				-1.3
761,416	-				-0.2
761,416	-				+1.5
761,419	-				+0.9
761,419	-				+0.1
761,428	-				+1.1
761,478	-				-0.3
761,478	-				-0.7
761,526	+				+0.1
761,526	+				-1.0
761,527	-				-0.0
761,573	+				-1.0
761,582	-				-0.1
761,589	-				-0.4
761,590	+				-0.3
761,590	+				-0.2
761,591	-				+1.5
761,591	-				+1.5
761,610	-				-0.3
761,701	+				+0.5
761,701	+				-2.6
761,701	+				+2.9
761,701	+				-0.9
761,701	+				-2.1
761,702	-				-0.1
761,702	-				-0.7
761,702	-				-0.3
761,714	+				+1.5
761,714	+				-0.7
761,714	+				+0.3
761,714	+				-1.1
761,715	-				-0.0
761,715	-				+1.5
761,715	-				-0.3
761,715	-				-0.5
761,715	-				+0.9
761,715	-				+0.2
761,715	-				-0.2
761,715	-				-1.6
761,715	-				-1.5
761,720	+				-0.4
761,720	+				+1.2
761,720	+				-0.8
761,720	+				+0.2
761,720	+				+0.4
761,721	-				+0.5
761,721	-				-0.2
761,721	-				-0.7
761,721	-				-0.2
761,721	-				-0.6
761,721	-				-0.3
761,721	-				-0.3
761,815	+				+1.1
761,815	+				+0.7
761,815	+				-1.3
761,815	+				+0.8
761,815	+				-1.3
761,815	+				+1.5
761,815	+				+1.0
761,815	+				+0.1
761,815	+				+0.5
761,816	-				-1.5
761,816	-				+0.8
761,816	-				-0.7
761,816	-				+0.3
761,861	+				-1.4
761,861	+				+1.9
761,862	-				-0.1
761,921	-				-1.1
761,921	-				+0.6
761,933	+				+0.6
761,933	+				-1.8
761,933	+				+0.1
761,933	+				+0.7
761,933	+				+0.1
761,933	+				-2.0
761,933	+				+0.6
761,933	+				+0.8
761,933	+				+2.5
761,934	-				+0.5
761,934	-				-0.1
761,934	-				-0.7
761,934	-				+1.1
761,934	-				-1.7
761,934	-				+0.7
761,934	-				-0.7
761,934	-				-0.0
761,934	-				-0.3
761,937	+				+1.1
761,937	+				-0.2
761,937	+				-0.4
761,937	+				+0.8
761,937	+				-0.7
761,938	-				+0.1
761,938	-				+0.2
761,938	-				+1.2
761,938	-				-0.2
761,938	-				-0.5
761,938	-				-0.7
761,938	-				+0.7
761,941	+				-0.2
761,941	+				+0.5
761,941	+				-0.7
761,941	+				+1.2
761,941	+				-0.4
761,941	+				-0.8
761,941	+				-1.2
761,942	-				-1.1
761,942	-				-0.6
761,942	-				+0.2
761,942	-				-0.6
761,950	+				-0.3
761,980	+				+0.1
761,980	+				+0.5
761,981	-				-0.2
761,986	+				-0.9
761,986	+				-1.3
761,986	+				-0.8
761,986	+				-0.0
761,986	+				-1.7
761,986	+				+0.8
761,986	+				+0.3
761,986	+				+1.8
761,986	+				+1.3
761,987	-				-0.1
761,987	-				-1.0
761,987	-				+1.2
761,987	-				-2.3
762,043	+				-0.5
762,044	-				-1.5
762,044	-				-1.3
762,044	-				-0.8
762,044	-				-0.9
762,044	-				+1.2
762,067	+				+0.5
762,076	+				-0.7
762,077	-				+0.1
762,095	+				+0.1
762,096	-				-0.3
762,096	-				-0.5
762,144	+				-0.1
762,144	+				+0.4
762,144	+				-0.5
762,145	-				-0.3
762,145	-				+0.3
762,234	+				+0.5
762,234	+				+1.0
762,234	+				-1.0
762,234	+				-0.3
762,234	+				+0.9
762,234	+				-0.5
762,234	+				-0.0
762,235	-				+0.3
762,235	-				-0.9
762,235	-				+2.2
762,238	+				-0.2
762,238	+				+0.2
762,238	+				+0.5
762,239	-				+0.7
762,239	-				+0.8
762,239	-				-0.5
762,239	-				+0.5
762,239	-				-1.4
762,239	-				-0.4
762,265	+				+0.6
762,265	+				+1.5
762,265	+				-1.7
762,265	+				+1.1
762,265	+				-0.3
762,265	+				+1.0
762,265	+				-0.2
762,265	+				+0.6
762,265	+				-1.8
762,265	+				+0.6
762,265	+				+0.8
762,265	+				+0.7
762,265	+				-0.8
762,265	+				-0.3
762,265	+				+0.7
762,266	-				-2.1
762,266	-				+0.1
762,266	-				+0.4
762,266	-				+0.2
762,266	-				-0.7
762,266	-				-1.2
762,266	-				-0.1
762,266	-				-0.5
762,266	-				-0.8
762,266	-				-1.2
762,266	-				-0.2
762,266	-				+0.7
762,266	-				+0.6
762,266	-				+0.9
762,266	-				+0.2
762,266	-				-1.0
762,266	-				+0.3
762,268	+				-0.6
762,268	+				-0.8
762,268	+				-1.8
762,268	+				+0.5
762,268	+				-0.2
762,268	+				+1.5
762,269	-				-1.3
762,269	-				+0.1
762,269	-				+0.5
762,269	-				+0.1
762,269	-				+1.6
762,338	+		IAI47_03660	0.11	+0.6
762,339	-		IAI47_03660	0.11	-0.5
762,463	+		IAI47_03660	0.17	+1.5
762,464	-		IAI47_03660	0.17	-0.5
762,464	-		IAI47_03660	0.17	+1.1
762,469	+		IAI47_03660	0.17	-0.5
762,470	-		IAI47_03660	0.18	+0.3
762,481	+		IAI47_03660	0.18	-0.9
762,481	+		IAI47_03660	0.18	+0.5
762,481	+		IAI47_03660	0.18	-0.7
762,481	+		IAI47_03660	0.18	-1.3
762,481	+		IAI47_03660	0.18	+1.2
762,481	+		IAI47_03660	0.18	+0.8
762,482	-		IAI47_03660	0.18	-0.0
762,482	-		IAI47_03660	0.18	+1.5
762,482	-		IAI47_03660	0.18	+1.1
762,482	-		IAI47_03660	0.18	+0.1
762,508	-		IAI47_03660	0.19	-0.3
762,643	+		IAI47_03660	0.26	+1.5
762,644	-		IAI47_03660	0.26	+1.1
762,658	+		IAI47_03660	0.27	-2.3
762,658	+		IAI47_03660	0.27	+0.7
762,659	-		IAI47_03660	0.27	-1.5
762,659	-		IAI47_03660	0.27	+0.5
762,659	-		IAI47_03660	0.27	+0.9
762,660	+		IAI47_03660	0.27	+0.1
762,660	+		IAI47_03660	0.27	+0.3
762,660	+		IAI47_03660	0.27	+0.5
762,660	+		IAI47_03660	0.27	+0.2
762,660	+		IAI47_03660	0.27	+0.7
762,661	-		IAI47_03660	0.27	-0.2
762,661	-		IAI47_03660	0.27	-0.1
762,661	-		IAI47_03660	0.27	+0.2
762,661	-		IAI47_03660	0.27	-0.2
762,661	-		IAI47_03660	0.27	-0.3
762,703	+		IAI47_03660	0.29	+0.5
762,703	+		IAI47_03660	0.29	-0.1
762,703	+		IAI47_03660	0.29	-0.1
762,704	-		IAI47_03660	0.29	+1.1
762,704	-		IAI47_03660	0.29	+0.5
762,817	-		IAI47_03660	0.35	+1.7
763,003	+		IAI47_03660	0.44	+1.2
763,003	+		IAI47_03660	0.44	-1.3
763,004	-		IAI47_03660	0.45	+1.0
763,004	-		IAI47_03660	0.45	+0.2
763,029	+		IAI47_03660	0.46	-0.5
763,029	+		IAI47_03660	0.46	-0.9
763,111	+		IAI47_03660	0.50	-0.7
763,111	+		IAI47_03660	0.50	+0.5
763,111	+		IAI47_03660	0.50	+0.7
763,111	+		IAI47_03660	0.50	-0.2
763,111	+		IAI47_03660	0.50	-0.2
763,111	+		IAI47_03660	0.50	+1.5
763,111	+		IAI47_03660	0.50	-0.4
763,112	-		IAI47_03660	0.50	-0.5
763,112	-		IAI47_03660	0.50	+0.1
763,112	-		IAI47_03660	0.50	+0.8
763,112	-		IAI47_03660	0.50	-0.3
763,112	-		IAI47_03660	0.50	-1.1
763,112	-		IAI47_03660	0.50	+0.3
763,112	-		IAI47_03660	0.50	-1.8
763,126	+		IAI47_03660	0.51	-0.2
763,126	+		IAI47_03660	0.51	-0.4
763,126	+		IAI47_03660	0.51	-0.9
763,126	+		IAI47_03660	0.51	-2.3
763,127	-		IAI47_03660	0.51	+0.3
763,248	+		IAI47_03660	0.57	+0.5
763,248	+		IAI47_03660	0.57	+0.0
763,249	-		IAI47_03660	0.57	+1.3
763,249	-		IAI47_03660	0.57	+2.1
763,249	-		IAI47_03660	0.57	-0.5
763,253	+		IAI47_03660	0.57	-0.4
763,267	-		IAI47_03660	0.58	+1.3
763,413	+		IAI47_03660	0.65	-0.3
763,437	+		IAI47_03660	0.66	+1.3
763,437	+		IAI47_03660	0.66	-1.3
763,437	+		IAI47_03660	0.66	+0.9
763,437	+		IAI47_03660	0.66	-0.1
763,438	-		IAI47_03660	0.66	-0.9
763,441	+		IAI47_03660	0.67	-0.2
763,441	+		IAI47_03660	0.67	+1.5
763,441	+		IAI47_03660	0.67	-0.7
763,441	+		IAI47_03660	0.67	+0.5
763,441	+		IAI47_03660	0.67	-0.0
763,441	+		IAI47_03660	0.67	+0.1
763,441	+		IAI47_03660	0.67	+1.2
763,441	+		IAI47_03660	0.67	+1.9
763,441	+		IAI47_03660	0.67	-0.7
763,441	+		IAI47_03660	0.67	+0.3
763,442	-		IAI47_03660	0.67	-0.1
763,442	-		IAI47_03660	0.67	-0.5
763,442	-		IAI47_03660	0.67	+0.2
763,442	-		IAI47_03660	0.67	-0.2
763,442	-		IAI47_03660	0.67	-2.7
763,442	-		IAI47_03660	0.67	-0.3
763,477	+		IAI47_03660	0.68	+0.9
763,477	+		IAI47_03660	0.68	+0.5
763,495	+		IAI47_03660	0.69	-0.7
763,495	+		IAI47_03660	0.69	+2.5
763,495	+		IAI47_03660	0.69	-0.9
763,495	+		IAI47_03660	0.69	+0.4
763,495	+		IAI47_03660	0.69	-1.5
763,496	-		IAI47_03660	0.69	+0.8
763,496	-		IAI47_03660	0.69	-1.5
763,496	-		IAI47_03660	0.69	-0.8
763,496	-		IAI47_03660	0.69	+0.6
763,496	-		IAI47_03660	0.69	-0.5
763,497	+		IAI47_03660	0.69	+1.5
763,497	+		IAI47_03660	0.69	-0.5
763,497	+		IAI47_03660	0.69	+1.8
763,497	+		IAI47_03660	0.69	+0.5
763,498	-		IAI47_03660	0.69	+3.1
763,498	-		IAI47_03660	0.69	+0.3
763,498	-		IAI47_03660	0.69	+0.7
763,498	-		IAI47_03660	0.69	+0.9
763,498	-		IAI47_03660	0.69	+0.5
763,498	-		IAI47_03660	0.69	+0.9
763,572	+		IAI47_03660	0.73	-0.1
763,572	+		IAI47_03660	0.73	+0.9
763,572	+		IAI47_03660	0.73	-0.5
763,572	+		IAI47_03660	0.73	-0.3
763,572	+		IAI47_03660	0.73	+1.1
763,572	+		IAI47_03660	0.73	+0.6
763,572	+		IAI47_03660	0.73	-0.7
763,572	+		IAI47_03660	0.73	+0.5
763,573	-		IAI47_03660	0.73	+1.5
763,573	-		IAI47_03660	0.73	+1.3
763,573	-		IAI47_03660	0.73	-0.5
763,573	-		IAI47_03660	0.73	+0.6
763,579	+		IAI47_03660	0.74	+0.5
763,579	+		IAI47_03660	0.74	+0.2
763,579	+		IAI47_03660	0.74	+1.0
763,579	+		IAI47_03660	0.74	+0.1
763,579	+		IAI47_03660	0.74	-2.1
763,579	+		IAI47_03660	0.74	-0.3
763,579	+		IAI47_03660	0.74	+0.6
763,580	-		IAI47_03660	0.74	+0.4
763,580	-		IAI47_03660	0.74	+1.5
763,580	-		IAI47_03660	0.74	+0.2
763,580	-		IAI47_03660	0.74	-1.5
763,580	-		IAI47_03660	0.74	+0.5
763,580	-		IAI47_03660	0.74	+0.5
763,580	-		IAI47_03660	0.74	-1.1
763,584	+		IAI47_03660	0.74	+1.5
763,584	+		IAI47_03660	0.74	+1.7
763,732	+		IAI47_03660	0.81	+0.7
763,732	+		IAI47_03660	0.81	-2.3
763,733	-		IAI47_03660	0.81	-1.1
763,733	-		IAI47_03660	0.81	+1.1
763,733	-		IAI47_03660	0.81	+0.7
763,733	-		IAI47_03660	0.81	-0.1
763,733	-		IAI47_03660	0.81	-0.5
763,777	+		IAI47_03660	0.84	+0.5
763,778	-		IAI47_03660	0.84	-0.7
763,788	+		IAI47_03660	0.84	+0.1
763,789	-		IAI47_03660	0.84	-0.2
763,789	-		IAI47_03660	0.84	+0.1
763,825	+		IAI47_03660	0.86	-1.4
763,826	-		IAI47_03660	0.86	-0.3
763,826	-		IAI47_03660	0.86	+0.5
763,885	+		IAI47_03660	0.89	+0.7
763,885	+		IAI47_03660	0.89	+0.2
763,885	+		IAI47_03660	0.89	+0.5
763,885	+		IAI47_03660	0.89	+0.5
763,885	+		IAI47_03660	0.89	-0.1
763,886	-		IAI47_03660	0.89	+1.5
763,886	-		IAI47_03660	0.89	-1.8
763,886	-		IAI47_03660	0.89	-0.3
763,886	-		IAI47_03660	0.89	-0.3
763,886	-		IAI47_03660	0.89	-0.1
763,936	-				+0.3
763,957	+				+2.8
763,958	-				-2.1
763,958	-				-0.7
763,958	-				-0.5
763,958	-				-0.5
763,958	-				-0.1
764,077	+				-0.0
764,077	+				-0.2
764,077	+				-0.0
764,078	-				+1.5
764,078	-				-1.0
764,083	+				+0.1
764,083	+				-3.0
764,083	+				+0.9
764,084	-				-0.9
764,084	-				+0.5
764,084	-				+2.3
764,084	-				+1.1
764,087	+				+0.2
764,087	+				-0.0
764,087	+				-1.5
764,087	+				+0.6
764,088	-				+0.8
764,088	-				-1.6
764,088	-				+0.5
764,088	-				+0.0
764,088	-				+2.0
764,126	+				+1.1
764,126	+				+0.5
764,127	-				+2.3
764,127	-				-0.7
764,127	-				+0.6
764,141	+				-0.2
764,145	+				-0.2
764,145	+				+0.1
764,145	+				-1.1
764,146	-				-0.6
764,146	-				-0.8
764,146	-				-0.6
764,188	+				+1.2
764,189	-				+0.5
764,190	-				+0.6
764,223	+				+1.5
764,223	+				-0.5
764,224	-				-0.8
764,224	-				-0.4
764,248	+				-0.0
764,248	+				-0.3
764,257	+				-0.7
764,257	+				+1.1
764,257	+				+0.3
764,257	+				-1.3
764,257	+				-0.5
764,257	+				+1.5
764,257	+				+0.5
764,257	+				-0.3
764,258	-				-0.1
764,258	-				-0.1
764,258	-				-0.4
764,258	-				+1.5
764,258	-				-0.5
764,270	+				-0.0
764,270	+				-0.1
764,270	+				+0.7
764,270	+				-1.8
764,270	+				-0.5
764,270	+				+1.0
764,270	+				+0.5
764,270	+				-1.5
764,270	+				-0.4
764,270	+				+0.0
764,270	+				-0.2
764,271	-				-0.9
764,271	-				+2.8
764,271	-				-1.0
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