Strain Fitness in Pantoea sp. MT58 around IAI47_14470

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
3,056,173	-		IAI47_14460	0.86	+0.7
3,056,179	-		IAI47_14460	0.87	+1.0
3,056,203	-		IAI47_14460	0.88	-2.2
3,056,203	-		IAI47_14460	0.88	-0.1
3,056,214	+		IAI47_14460	0.88	-0.8
3,056,215	-		IAI47_14460	0.88	+0.4
3,056,254	+				-0.7
3,056,255	+				+0.1
3,056,255	+				+0.4
3,056,255	+				+0.0
3,056,255	+				+0.4
3,056,256	-				+1.4
3,056,256	-				-0.1
3,056,256	-				-0.0
3,056,256	-				-0.6
3,056,351	+				-2.2
3,056,351	+				+0.8
3,056,386	+				+0.2
3,056,386	+				-1.2
3,056,387	-				+0.4
3,056,387	-				-0.2
3,056,435	-				+0.2
3,056,532	+				-0.8
3,056,532	+				+0.1
3,056,647	-		IAI47_14465	0.19	+0.6
3,056,670	+		IAI47_14465	0.23	-1.2
3,056,670	+		IAI47_14465	0.23	-0.7
3,056,670	+		IAI47_14465	0.23	+0.4
3,056,670	+		IAI47_14465	0.23	-1.3
3,056,670	+		IAI47_14465	0.23	-0.1
3,056,671	-		IAI47_14465	0.23	+0.4
3,056,671	-		IAI47_14465	0.23	+0.9
3,056,671	-		IAI47_14465	0.23	+0.2
3,056,671	-		IAI47_14465	0.23	+2.2
3,056,772	+		IAI47_14465	0.40	-0.7
3,056,823	+		IAI47_14465	0.48	-0.4
3,056,824	-		IAI47_14465	0.48	-0.5
3,056,824	-		IAI47_14465	0.48	-1.1
3,056,863	+		IAI47_14465	0.55	-0.6
3,056,864	-		IAI47_14465	0.55	+0.4
3,056,864	-		IAI47_14465	0.55	-2.4
3,056,864	-		IAI47_14465	0.55	+0.1
3,057,016	+		IAI47_14465	0.80	+0.6
3,057,016	+		IAI47_14465	0.80	+0.8
3,057,017	-		IAI47_14465	0.80	+0.4
3,057,017	-		IAI47_14465	0.80	-0.2
3,057,151	-				-1.2
3,057,151	-				-0.4
3,057,264	+		IAI47_14470	0.38	+1.4
3,057,264	+		IAI47_14470	0.38	-1.9
3,057,265	-		IAI47_14470	0.39	-0.8
3,057,265	-		IAI47_14470	0.39	-0.2
3,057,265	-		IAI47_14470	0.39	-1.9
3,057,265	-		IAI47_14470	0.39	+2.0
3,057,265	-		IAI47_14470	0.39	-0.7
3,057,456	+				+1.4
3,057,457	-				+1.0
3,057,469	-				+0.9
3,057,485	+				-0.9
3,057,486	-				+0.9
3,057,486	-				-0.6
3,057,486	-				-0.9
3,057,486	-				-0.8
3,057,486	-				+0.3
3,057,491	+				-0.6
3,057,492	-				+0.1
3,057,492	-				-0.2
3,057,492	-				-1.9
3,057,492	-				+1.5
3,057,500	-				-0.4
3,057,505	+				-0.8
3,057,505	+				+2.5
3,057,506	-				+1.8
3,057,510	+				-0.2
3,057,511	-				+0.7