Strain Fitness in Pantoea sp. MT58 around IAI47_13325

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
2,817,302	+				-0.0
2,817,321	+				+0.7
2,817,321	+				-0.5
2,817,322	-				+1.4
2,817,322	-				-0.1
2,817,322	-				-0.9
2,817,330	-				-0.3
2,817,367	+				-2.2
2,817,367	+				-1.6
2,817,367	+				-0.1
2,817,368	-				-1.2
2,817,465	+		IAI47_13320	0.12	+1.0
2,817,466	-		IAI47_13320	0.12	-2.2
2,817,466	-		IAI47_13320	0.12	-0.9
2,817,546	+		IAI47_13320	0.20	-1.2
2,817,574	+		IAI47_13320	0.23	-0.8
2,817,575	-		IAI47_13320	0.24	-0.2
2,817,680	-		IAI47_13320	0.35	-0.8
2,817,762	+		IAI47_13320	0.43	+0.0
2,817,762	+		IAI47_13320	0.43	-0.0
2,817,763	-		IAI47_13320	0.43	-0.6
2,817,763	-		IAI47_13320	0.43	-0.3
2,817,763	-		IAI47_13320	0.43	-0.7
2,817,763	-		IAI47_13320	0.43	-1.5
2,818,015	-		IAI47_13320	0.70	-0.6
2,818,048	+		IAI47_13320	0.73	-0.6
2,818,065	-		IAI47_13320	0.75	+0.8
2,818,142	+		IAI47_13320	0.83	-0.2
2,818,143	-		IAI47_13320	0.83	-0.0
2,818,143	-		IAI47_13320	0.83	-3.1
2,818,143	-		IAI47_13320	0.83	+0.4
2,818,207	+				+3.0
2,818,207	+				+0.1
2,818,207	+				-0.3
2,818,385	+				+0.0
2,818,386	-				+0.4
2,818,386	-				+0.4
2,818,386	-				-0.5
2,818,532	+		IAI47_13325	0.20	+0.4
2,818,532	+		IAI47_13325	0.20	+0.4
2,818,533	-		IAI47_13325	0.20	-1.2
2,818,533	-		IAI47_13325	0.20	+0.4
2,818,533	-		IAI47_13325	0.20	+1.0
2,818,533	-		IAI47_13325	0.20	-1.4
2,818,653	+		IAI47_13325	0.31	+0.4
2,818,653	+		IAI47_13325	0.31	+0.8
2,818,654	-		IAI47_13325	0.31	-1.2
2,818,654	-		IAI47_13325	0.31	+0.8
2,818,697	-		IAI47_13325	0.34	-0.3
2,818,792	+		IAI47_13325	0.43	-0.8
2,818,792	+		IAI47_13325	0.43	-0.1
2,818,798	+		IAI47_13325	0.43	-0.6
2,818,798	+		IAI47_13325	0.43	+0.0
2,818,798	+		IAI47_13325	0.43	+0.6
2,818,798	+		IAI47_13325	0.43	-2.2
2,818,798	+		IAI47_13325	0.43	+0.7
2,818,798	+		IAI47_13325	0.43	-0.9
2,818,871	+		IAI47_13325	0.49	-0.6
2,818,872	-		IAI47_13325	0.49	-0.3
2,818,872	-		IAI47_13325	0.49	+1.3
2,818,872	-		IAI47_13325	0.49	-0.0
2,818,872	-		IAI47_13325	0.49	-0.1
2,818,883	+		IAI47_13325	0.50	-1.7
2,818,889	-		IAI47_13325	0.51	+0.4
2,818,950	+		IAI47_13325	0.56	-0.7
2,818,950	+		IAI47_13325	0.56	-0.4
2,818,951	-		IAI47_13325	0.56	+0.1
2,818,951	-		IAI47_13325	0.56	-0.7
2,819,077	+		IAI47_13325	0.67	-0.6
2,819,078	-		IAI47_13325	0.67	-0.8
2,819,078	-		IAI47_13325	0.67	-0.3
2,819,111	+		IAI47_13325	0.70	+1.0
2,819,111	+		IAI47_13325	0.70	-1.3
2,819,111	+		IAI47_13325	0.70	+0.4
2,819,112	-		IAI47_13325	0.70	-1.0
2,819,112	-		IAI47_13325	0.70	-0.2
2,819,112	-		IAI47_13325	0.70	+0.2
2,819,162	+		IAI47_13325	0.74	-2.3
2,819,162	+		IAI47_13325	0.74	+0.4
2,819,163	-		IAI47_13325	0.74	+0.0
2,819,163	-		IAI47_13325	0.74	+0.8
2,819,163	-		IAI47_13325	0.74	-1.1
2,819,163	-		IAI47_13325	0.74	+0.6
2,819,232	-		IAI47_13325	0.80	-0.0
2,819,232	-		IAI47_13325	0.80	-0.2
2,819,232	-		IAI47_13325	0.80	+0.7
2,819,239	+		IAI47_13325	0.81	-0.0
2,819,239	+		IAI47_13325	0.81	+1.2
2,819,239	+		IAI47_13325	0.81	-0.5
2,819,239	+		IAI47_13325	0.81	-1.7
2,819,239	+		IAI47_13325	0.81	-1.7
2,819,239	+		IAI47_13325	0.81	+0.0
2,819,240	-		IAI47_13325	0.81	-0.5
2,819,240	-		IAI47_13325	0.81	-1.6
2,819,240	-		IAI47_13325	0.81	+0.4
2,819,240	-		IAI47_13325	0.81	-0.7
2,819,240	-		IAI47_13325	0.81	+0.6
2,819,240	-		IAI47_13325	0.81	+2.0
2,819,240	-		IAI47_13325	0.81	-1.4
2,819,240	-		IAI47_13325	0.81	+1.0
2,819,242	+		IAI47_13325	0.81	+0.3
2,819,242	+		IAI47_13325	0.81	-0.7
2,819,243	-		IAI47_13325	0.81	+2.7
2,819,294	+		IAI47_13325	0.85	-0.6
2,819,294	+		IAI47_13325	0.85	-0.3
2,819,295	-		IAI47_13325	0.85	+0.3
2,819,295	-		IAI47_13325	0.85	-0.2
2,819,295	-		IAI47_13325	0.85	+0.2
2,819,420	+				+1.1
2,819,445	-				+0.8
2,819,472	+				-0.8
2,819,473	-				+1.0
2,819,508	-				-0.9
2,819,616	+		IAI47_13330	0.16	-0.6
2,819,658	+		IAI47_13330	0.21	+0.7
2,819,658	+		IAI47_13330	0.21	+0.4
2,819,658	+		IAI47_13330	0.21	+1.5
2,819,658	+		IAI47_13330	0.21	-0.4
2,819,669	+		IAI47_13330	0.22	-0.3
2,819,669	+		IAI47_13330	0.22	-0.5
2,819,669	+		IAI47_13330	0.22	-0.6
2,819,669	+		IAI47_13330	0.22	-0.1
2,819,670	-		IAI47_13330	0.22	+0.7
2,819,670	-		IAI47_13330	0.22	+1.3
2,819,678	-		IAI47_13330	0.23	+0.2
2,819,678	-		IAI47_13330	0.23	+0.6
2,819,678	-		IAI47_13330	0.23	-0.1
2,819,730	+		IAI47_13330	0.28	+1.1
2,819,730	+		IAI47_13330	0.28	+1.4
2,819,731	-		IAI47_13330	0.29	+1.4
2,819,731	-		IAI47_13330	0.29	-0.8
2,819,827	+		IAI47_13330	0.39	+1.4
2,819,827	+		IAI47_13330	0.39	-0.9
2,819,827	+		IAI47_13330	0.39	-1.0
2,819,827	+		IAI47_13330	0.39	+0.6
2,819,828	-		IAI47_13330	0.39	-0.4
2,819,828	-		IAI47_13330	0.39	-0.1
2,819,841	+		IAI47_13330	0.41	-0.2
2,819,841	+		IAI47_13330	0.41	+0.4
2,819,841	+		IAI47_13330	0.41	-0.2
2,819,842	-		IAI47_13330	0.41	+0.4
2,819,881	+		IAI47_13330	0.45	+1.0
2,819,911	+		IAI47_13330	0.48	+0.7
2,819,911	+		IAI47_13330	0.48	-2.2
2,819,912	-		IAI47_13330	0.48	+0.2
2,819,953	+		IAI47_13330	0.53	+3.5
2,819,953	+		IAI47_13330	0.53	+0.0
2,819,953	+		IAI47_13330	0.53	-1.0
2,819,954	-		IAI47_13330	0.53	-0.1
2,819,954	-		IAI47_13330	0.53	+1.1
2,819,980	+		IAI47_13330	0.56	-0.2
2,819,981	-		IAI47_13330	0.56	+0.1
2,819,981	-		IAI47_13330	0.56	-0.3
2,819,981	-		IAI47_13330	0.56	-0.8
2,820,141	+		IAI47_13330	0.73	+0.3
2,820,142	-		IAI47_13330	0.74	+0.4
2,820,142	-		IAI47_13330	0.74	+0.1
2,820,150	+		IAI47_13330	0.74	+0.4
2,820,150	+		IAI47_13330	0.74	+0.4
2,820,151	-		IAI47_13330	0.75	+0.4
2,820,214	+		IAI47_13330	0.81	+1.5
2,820,215	-		IAI47_13330	0.82	-0.9
2,820,215	-		IAI47_13330	0.82	-0.3
2,820,215	-		IAI47_13330	0.82	+0.5
2,820,227	+		IAI47_13330	0.83	-0.3
2,820,228	-		IAI47_13330	0.83	-1.0
2,820,337	+				+0.4
2,820,337	+				+0.2
2,820,337	+				+0.2
2,820,337	+				-1.9
2,820,337	+				-1.0
2,820,337	+				-0.3
2,820,337	+				-0.8
2,820,338	-				+2.7
2,820,338	-				-0.2
2,820,338	-				-0.9
2,820,338	-				+0.4
2,820,443	+				+2.2
2,820,443	+				+0.4
2,820,443	+				+1.4
2,820,443	+				-0.3
2,820,443	+				+0.6
2,820,444	-				+0.7
2,820,444	-				+0.9
2,820,444	-				-1.2
2,820,444	-				+0.4
2,820,444	-				+0.4
2,820,444	-				+1.0
2,820,444	-				-2.5
2,820,444	-				+0.9
2,820,444	-				-1.2