Strain Fitness in Pantoea sp. MT58 around IAI47_07530

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,587,340	-				-1.3
1,587,355	+				-2.4
1,587,499	-				-1.1
1,587,517	+				-0.1
1,587,660	+		IAI47_07525	0.50	-0.3
1,587,664	+		IAI47_07525	0.52	-0.6
1,587,665	-		IAI47_07525	0.52	+1.9
1,587,670	+		IAI47_07525	0.54	-1.3
1,587,680	-		IAI47_07525	0.57	-2.6
1,587,718	+		IAI47_07525	0.69	-1.1
1,587,723	+		IAI47_07525	0.71	+0.3
1,587,723	+		IAI47_07525	0.71	+1.1
1,587,740	-		IAI47_07525	0.76	+1.2
1,587,823	+				-1.1
1,587,841	-				-1.1
1,587,843	-				-0.7
1,587,895	+				-0.3
1,587,988	+				-0.2
1,588,006	-				+0.7
1,588,058	+				-0.4
1,588,119	-				+0.8
1,588,187	+				+2.1
1,588,188	-				-2.3
1,588,189	+				-2.0
1,588,189	+				+0.0
1,588,245	-				+0.0
1,588,248	+				-0.2
1,588,248	+				-0.3
1,588,249	-				-1.1
1,588,432	+				-1.0
1,588,482	+				+0.7
1,588,532	+				-1.7
1,588,533	-				-0.5
1,588,551	-				+1.1
1,588,613	-				+0.3
1,588,664	+		IAI47_07530	0.12	+0.3
1,588,723	-		IAI47_07530	0.14	+0.0
1,588,810	-		IAI47_07530	0.17	+0.1
1,588,858	-		IAI47_07530	0.18	+1.5
1,588,945	+		IAI47_07530	0.21	+0.5
1,588,951	-		IAI47_07530	0.22	+1.1
1,589,179	+		IAI47_07530	0.29	-0.7
1,589,221	+		IAI47_07530	0.31	-0.9
1,589,231	-		IAI47_07530	0.31	-0.4
1,589,379	+		IAI47_07530	0.36	+0.0
1,589,564	+		IAI47_07530	0.43	-1.0
1,589,606	+		IAI47_07530	0.44	-0.4
1,589,606	+		IAI47_07530	0.44	-0.6
1,589,606	+		IAI47_07530	0.44	-0.5
1,589,607	-		IAI47_07530	0.44	-0.3
1,589,638	+		IAI47_07530	0.45	+0.9
1,589,639	-		IAI47_07530	0.45	-0.3
1,589,827	-		IAI47_07530	0.52	+1.1
1,589,869	+		IAI47_07530	0.53	-1.3
1,589,870	-		IAI47_07530	0.53	-0.5
1,589,988	+		IAI47_07530	0.57	+0.7
1,590,037	-		IAI47_07530	0.59	-0.3
1,590,080	-		IAI47_07530	0.60	+0.7
1,590,177	+		IAI47_07530	0.64	+0.3
1,590,250	-		IAI47_07530	0.66	+1.7
1,590,547	-		IAI47_07530	0.76	+0.3
1,590,660	+		IAI47_07530	0.80	+0.0
1,590,692	-		IAI47_07530	0.81	+1.3
1,590,903	+		IAI47_07530	0.89	-0.3
1,590,953	+				-0.5
1,590,973	-				-0.7
1,590,998	-				-0.5
1,591,017	-				-1.3
1,591,038	+				-1.0
1,591,091	-				+1.3
1,591,123	-				+1.0
1,591,148	-				+0.9
1,591,228	-				+0.3
1,591,278	-				-2.3
1,591,413	-				+1.0
1,591,465	+		IAI47_07535	0.12	+0.3
1,591,473	-		IAI47_07535	0.12	+1.1
1,591,509	-		IAI47_07535	0.14	+0.5
1,591,516	+		IAI47_07535	0.14	+0.3
1,591,517	-		IAI47_07535	0.14	-0.1
1,591,517	-		IAI47_07535	0.14	+0.9
1,591,518	+		IAI47_07535	0.15	-0.8
1,591,519	-		IAI47_07535	0.15	+0.4
1,591,519	-		IAI47_07535	0.15	-0.7
1,591,519	-		IAI47_07535	0.15	+1.2
1,591,546	+		IAI47_07535	0.16	+0.3
1,591,584	-		IAI47_07535	0.18	-0.3
1,591,584	-		IAI47_07535	0.18	-1.3
1,591,599	-		IAI47_07535	0.19	-1.4
1,591,599	-		IAI47_07535	0.19	+0.3
1,591,599	-		IAI47_07535	0.19	-2.2
1,591,645	-		IAI47_07535	0.21	-0.7
1,591,823	+		IAI47_07535	0.30	-0.3
1,592,179	+		IAI47_07535	0.49	+0.3
1,592,186	-		IAI47_07535	0.49	+0.3
1,592,227	+		IAI47_07535	0.51	+0.3
1,592,227	+		IAI47_07535	0.51	+0.6
1,592,228	-		IAI47_07535	0.51	+0.7