Strain Fitness in Pantoea sp. MT58 around IAI47_17025

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,610,286	+		IAI47_17015	0.48	+0.2
3,610,302	-		IAI47_17015	0.49	-1.8
3,610,302	-		IAI47_17015	0.49	+0.8
3,610,315	+		IAI47_17015	0.51	+1.4
3,610,315	+		IAI47_17015	0.51	-0.5
3,610,315	+		IAI47_17015	0.51	+0.6
3,610,315	+		IAI47_17015	0.51	+0.7
3,610,316	-		IAI47_17015	0.51	+0.9
3,610,316	-		IAI47_17015	0.51	+0.2
3,610,366	+		IAI47_17015	0.56	-0.3
3,610,366	+		IAI47_17015	0.56	-0.6
3,610,366	+		IAI47_17015	0.56	-0.6
3,610,366	+		IAI47_17015	0.56	+0.7
3,610,366	+		IAI47_17015	0.56	-0.0
3,610,367	+		IAI47_17015	0.56	+0.2
3,610,367	-		IAI47_17015	0.56	+0.2
3,610,372	+		IAI47_17015	0.57	+0.1
3,610,372	+		IAI47_17015	0.57	+0.2
3,610,372	+		IAI47_17015	0.57	+0.6
3,610,373	-		IAI47_17015	0.57	+0.9
3,610,373	-		IAI47_17015	0.57	+1.6
3,610,373	-		IAI47_17015	0.57	+0.7
3,610,373	-		IAI47_17015	0.57	+0.2
3,610,555	+		IAI47_17015	0.76	+1.5
3,610,556	-		IAI47_17015	0.76	-0.1
3,610,556	-		IAI47_17015	0.76	+0.5
3,610,579	+		IAI47_17015	0.79	-0.1
3,610,579	+		IAI47_17015	0.79	+0.2
3,610,580	-		IAI47_17015	0.79	+1.2
3,610,580	-		IAI47_17015	0.79	+0.3
3,610,667	+		IAI47_17015	0.88	-0.4
3,610,679	+		IAI47_17015	0.89	+0.5
3,610,680	-		IAI47_17015	0.89	-0.2
3,610,686	+		IAI47_17015	0.90	-1.8
3,610,686	+		IAI47_17015	0.90	+1.0
3,610,686	+		IAI47_17015	0.90	-0.9
3,610,686	+		IAI47_17015	0.90	+2.2
3,610,687	-				+1.5
3,610,687	-				-0.8
3,610,687	-				+0.0
3,610,687	-				+0.1
3,610,687	-				+0.2
3,610,727	+				+1.2
3,610,727	+				-1.4
3,610,727	+				+1.2
3,610,727	+				-1.4
3,610,728	-				+2.1
3,610,728	-				+0.4
3,610,728	-				+0.7
3,610,782	+				+0.2
3,610,783	-				-0.1
3,610,783	-				+1.2
3,610,783	-				+0.8
3,610,865	-		IAI47_17020	0.21	-1.8
3,610,865	-		IAI47_17020	0.21	-0.8
3,610,865	-		IAI47_17020	0.21	-0.8
3,610,865	-		IAI47_17020	0.21	-2.4
3,610,865	-		IAI47_17020	0.21	-0.2
3,610,865	-		IAI47_17020	0.21	-0.8
3,610,881	-		IAI47_17020	0.25	-2.1
3,610,881	-		IAI47_17020	0.25	-1.4
3,611,206	-				-1.0
3,611,253	-				+0.1
3,611,253	-				-2.6
3,611,253	-				+1.2
3,611,256	-				-2.1
3,613,964	-				-1.8
3,613,964	-				+0.4
3,613,964	-				+1.1
3,613,964	-				-0.4
3,613,964	-				+0.7
3,613,967	-				-1.4
3,613,995	-				+1.0
3,613,995	-				+1.0
3,613,995	-				+1.8
3,613,995	-				+0.3
3,613,995	-				+1.4