Strain Fitness in Pantoea sp. MT58 around IAI47_11020

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,323,269	+				+0.1
2,323,270	-				+2.1
2,323,333	+				-0.3
2,323,401	-		IAI47_11015	0.12	+1.9
2,323,412	+		IAI47_11015	0.14	+0.5
2,323,456	-		IAI47_11015	0.19	+0.5
2,323,508	+		IAI47_11015	0.25	+1.1
2,323,508	+		IAI47_11015	0.25	+0.1
2,323,509	-		IAI47_11015	0.25	+0.2
2,323,509	-		IAI47_11015	0.25	+0.9
2,323,543	+		IAI47_11015	0.29	-0.5
2,323,543	+		IAI47_11015	0.29	-0.3
2,323,544	-		IAI47_11015	0.29	-1.1
2,323,544	-		IAI47_11015	0.29	-0.2
2,323,576	+		IAI47_11015	0.33	-0.5
2,323,577	-		IAI47_11015	0.33	-2.2
2,323,610	+		IAI47_11015	0.37	-0.1
2,323,610	+		IAI47_11015	0.37	-1.0
2,323,676	+		IAI47_11015	0.45	+0.5
2,323,789	+		IAI47_11015	0.59	-1.2
2,323,789	+		IAI47_11015	0.59	-0.6
2,323,911	-		IAI47_11015	0.73	+0.7
2,323,911	-		IAI47_11015	0.73	+1.1
2,323,911	-		IAI47_11015	0.73	-0.5
2,323,911	-		IAI47_11015	0.73	+0.3
2,323,916	+		IAI47_11015	0.74	+1.3
2,323,924	+		IAI47_11015	0.75	-0.5
2,323,989	+		IAI47_11015	0.83	-0.9
2,323,989	+		IAI47_11015	0.83	+0.3
2,323,989	+		IAI47_11015	0.83	+0.9
2,323,989	+		IAI47_11015	0.83	-0.3
2,323,990	-		IAI47_11015	0.83	+1.1
2,323,990	-		IAI47_11015	0.83	+0.3
2,323,993	+		IAI47_11015	0.83	-2.3
2,323,993	+		IAI47_11015	0.83	-0.3
2,323,993	+		IAI47_11015	0.83	+0.4
2,323,993	+		IAI47_11015	0.83	+0.4
2,323,993	+		IAI47_11015	0.83	-1.5
2,323,994	-		IAI47_11015	0.83	+0.9
2,323,994	-		IAI47_11015	0.83	+1.7
2,324,055	-				+0.1
2,324,062	+				+0.9
2,324,062	+				-1.2
2,324,063	-				+0.5
2,324,063	-				-2.3
2,324,063	-				-0.5
2,324,132	+				-0.3
2,324,133	-				+0.1
2,324,147	+				+0.4
2,324,147	+				+2.2
2,324,147	+				-2.2
2,324,147	+				+0.1
2,324,148	-				-0.2
2,324,148	-				+0.6
2,324,148	-				+0.3
2,324,148	-				+0.1
2,324,148	-				+0.1
2,324,148	-				+0.2
2,324,148	-				-0.7
2,324,148	-				+1.5
2,324,148	-				+0.4
2,324,150	+				-0.7
2,324,150	+				-1.5
2,324,150	+				-0.5
2,324,151	-				-0.7
2,324,151	-				-0.1
2,324,151	-				+1.1
2,324,151	-				+1.1
2,324,151	-				-0.2
2,324,155	+				-0.2
2,324,162	+				-1.9
2,324,163	-				+0.8
2,324,163	-				-0.9
2,324,163	-				+0.2
2,324,163	-				-0.7
2,324,180	+				-1.2
2,324,181	-				-0.9
2,324,181	-				-0.1
2,324,216	-				+0.2
2,324,259	-		IAI47_11020	0.14	-0.1
2,324,362	+		IAI47_11020	0.28	+1.3
2,324,362	+		IAI47_11020	0.28	-0.2
2,324,362	+		IAI47_11020	0.28	+0.9
2,324,362	+		IAI47_11020	0.28	+0.8
2,324,363	-		IAI47_11020	0.28	-0.5
2,324,363	-		IAI47_11020	0.28	-0.7
2,324,363	-		IAI47_11020	0.28	+0.1
2,324,363	-		IAI47_11020	0.28	-1.1
2,324,363	-		IAI47_11020	0.28	+0.1
2,324,363	-		IAI47_11020	0.28	+0.2
2,324,366	-		IAI47_11020	0.28	-0.7
2,324,366	-		IAI47_11020	0.28	-0.3
2,324,402	+		IAI47_11020	0.33	+0.1
2,324,423	+		IAI47_11020	0.36	-0.8
2,324,424	-		IAI47_11020	0.36	-0.9
2,324,424	-		IAI47_11020	0.36	+0.1
2,324,435	+		IAI47_11020	0.37	-0.0
2,324,436	-		IAI47_11020	0.37	+1.9
2,324,492	+		IAI47_11020	0.45	+0.1
2,324,492	+		IAI47_11020	0.45	-0.5
2,324,492	+		IAI47_11020	0.45	+0.6
2,324,492	+		IAI47_11020	0.45	+1.4
2,324,493	-		IAI47_11020	0.45	+0.2
2,324,493	-		IAI47_11020	0.45	+0.4
2,324,498	+		IAI47_11020	0.46	-0.5
2,324,498	+		IAI47_11020	0.46	-0.9
2,324,498	+		IAI47_11020	0.46	-0.7
2,324,498	+		IAI47_11020	0.46	+0.5
2,324,499	-		IAI47_11020	0.46	-0.1
2,324,499	-		IAI47_11020	0.46	+0.1
2,324,499	-		IAI47_11020	0.46	+0.5
2,324,543	+		IAI47_11020	0.51	+0.5
2,324,544	-		IAI47_11020	0.52	-0.5
2,324,570	+		IAI47_11020	0.55	-0.5
2,324,570	+		IAI47_11020	0.55	+0.6
2,324,571	-		IAI47_11020	0.55	+0.1
2,324,571	-		IAI47_11020	0.55	+0.1
2,324,622	+		IAI47_11020	0.62	-0.6
2,324,622	+		IAI47_11020	0.62	+2.1
2,324,622	+		IAI47_11020	0.62	+1.4
2,324,622	+		IAI47_11020	0.62	+0.9
2,324,622	+		IAI47_11020	0.62	+0.1
2,324,622	+		IAI47_11020	0.62	+0.0
2,324,622	+		IAI47_11020	0.62	-0.9
2,324,623	-		IAI47_11020	0.62	-0.5
2,324,623	-		IAI47_11020	0.62	-1.0
2,324,623	-		IAI47_11020	0.62	+0.4
2,324,624	+		IAI47_11020	0.62	-0.2
2,324,624	+		IAI47_11020	0.62	-0.1
2,324,625	-		IAI47_11020	0.62	-0.5
2,324,693	+		IAI47_11020	0.71	-2.2
2,324,693	+		IAI47_11020	0.71	-0.1
2,324,694	-		IAI47_11020	0.71	+0.1
2,324,694	-		IAI47_11020	0.71	+0.1
2,324,694	-		IAI47_11020	0.71	-1.3
2,324,718	+		IAI47_11020	0.74	+0.4
2,324,718	+		IAI47_11020	0.74	-0.4
2,324,718	+		IAI47_11020	0.74	-1.5
2,324,718	+		IAI47_11020	0.74	-0.1
2,324,719	-		IAI47_11020	0.75	+0.6
2,324,735	+		IAI47_11020	0.77	+0.5
2,324,833	+		IAI47_11020	0.90	-1.0
2,324,834	-		IAI47_11020	0.90	+0.0
2,324,862	+				-0.0
2,324,862	+				-0.2
2,324,862	+				+2.4
2,324,863	-				-0.6
2,324,863	-				-2.3
2,324,863	-				-0.5
2,324,863	-				-0.8
2,324,874	+				+0.1
2,324,874	+				-1.8
2,324,911	-				-0.7
2,324,949	+				-1.5
2,324,949	+				+0.1
2,324,950	-				+0.1
2,324,952	+				+0.1
2,324,955	+				+1.3
2,324,955	+				-0.5
2,324,973	-				-0.2
2,325,002	-				+2.1
2,325,010	-				-0.4
2,325,010	-				+0.4
2,325,012	-				+0.1
2,325,012	-				+0.4
2,325,038	+				+0.1
2,325,049	+				-0.3
2,325,050	-				+0.1
2,325,050	-				-0.5
2,325,050	-				+0.9
2,325,202	+		IAI47_11025	0.25	+0.6
2,325,202	+		IAI47_11025	0.25	+0.0
2,325,203	-		IAI47_11025	0.25	-0.3
2,325,203	-		IAI47_11025	0.25	+0.1
2,325,203	-		IAI47_11025	0.25	+0.7
2,325,244	+		IAI47_11025	0.32	+0.1
2,325,245	-		IAI47_11025	0.32	-0.3
2,325,245	-		IAI47_11025	0.32	+2.6
2,325,245	-		IAI47_11025	0.32	+1.1
2,325,274	+		IAI47_11025	0.37	-0.4
2,325,275	-		IAI47_11025	0.38	+1.4
2,325,306	+		IAI47_11025	0.43	-1.5
2,325,322	+		IAI47_11025	0.46	+0.3
2,325,380	+		IAI47_11025	0.55	-0.0
2,325,381	-		IAI47_11025	0.55	+1.0
2,325,391	+		IAI47_11025	0.57	+0.3
2,325,391	+		IAI47_11025	0.57	-1.3
2,325,391	+		IAI47_11025	0.57	+1.1
2,325,391	+		IAI47_11025	0.57	+0.8
2,325,391	+		IAI47_11025	0.57	-1.5
2,325,391	+		IAI47_11025	0.57	+0.1
2,325,391	+		IAI47_11025	0.57	+0.5
2,325,391	+		IAI47_11025	0.57	+0.5
2,325,391	+		IAI47_11025	0.57	-0.4
2,325,391	+		IAI47_11025	0.57	-0.2
2,325,392	-		IAI47_11025	0.57	+0.1
2,325,392	-		IAI47_11025	0.57	-0.1
2,325,392	-		IAI47_11025	0.57	+0.7
2,325,392	-		IAI47_11025	0.57	-0.5
2,325,392	-		IAI47_11025	0.57	+0.1
2,325,392	-		IAI47_11025	0.57	-0.0
2,325,392	-		IAI47_11025	0.57	-0.5
2,325,392	-		IAI47_11025	0.57	-0.3
2,325,393	+		IAI47_11025	0.58	-1.1
2,325,393	+		IAI47_11025	0.58	-0.5
2,325,393	+		IAI47_11025	0.58	-1.0
2,325,393	+		IAI47_11025	0.58	+0.8
2,325,393	+		IAI47_11025	0.58	-0.9
2,325,393	+		IAI47_11025	0.58	-0.2
2,325,393	+		IAI47_11025	0.58	-0.5
2,325,394	-		IAI47_11025	0.58	+1.1
2,325,394	-		IAI47_11025	0.58	-1.0
2,325,394	-		IAI47_11025	0.58	-0.6
2,325,394	-		IAI47_11025	0.58	-0.4
2,325,394	-		IAI47_11025	0.58	-0.9
2,325,394	-		IAI47_11025	0.58	+0.8
2,325,404	-		IAI47_11025	0.59	+0.1
2,325,519	+		IAI47_11025	0.79	-0.9
2,325,519	+		IAI47_11025	0.79	-0.2
2,325,519	+		IAI47_11025	0.79	-0.2
2,325,519	+		IAI47_11025	0.79	+1.9
2,325,520	-		IAI47_11025	0.79	+0.7
2,325,520	-		IAI47_11025	0.79	-0.5
2,325,520	-		IAI47_11025	0.79	+0.6
2,325,520	-		IAI47_11025	0.79	+0.1
2,325,524	+		IAI47_11025	0.80	-1.3
2,325,524	+		IAI47_11025	0.80	+0.3
2,325,525	-		IAI47_11025	0.80	+1.1
2,325,525	-		IAI47_11025	0.80	-1.3
2,325,525	-		IAI47_11025	0.80	-1.2
2,325,592	+				+1.7
2,325,631	+				-0.2
2,325,631	+				+1.5
2,325,631	+				+1.1
2,325,631	+				-0.8
2,325,632	-				+1.1
2,325,663	+				+0.1
2,325,663	+				+0.1
2,325,663	+				-0.8
2,325,664	-				+1.1
2,325,667	+				+0.6
2,325,667	+				+0.1
2,325,669	+				-0.6
2,325,669	+				-0.1
2,325,670	-				+0.3
2,325,687	+				-0.1
2,325,687	+				+0.7
2,325,688	-				-0.6
2,325,689	+				-0.4
2,325,689	+				-0.2
2,325,689	+				+0.5
2,325,689	+				+0.6
2,325,690	-				-0.2
2,325,690	-				-2.2
2,325,690	-				+0.9
2,325,730	+				+1.7
2,325,730	+				+0.3
2,325,730	+				+0.7
2,325,730	+				+0.4
2,325,730	+				+1.4
2,325,731	-				-1.1
2,325,741	+				+0.3
2,325,741	+				+0.5
2,325,742	-				+1.4
2,325,742	-				+0.5
2,325,742	-				+1.3
2,325,747	+				-0.5
2,325,748	-				-0.3
2,325,748	-				-0.3
2,325,748	-				+0.1
2,325,778	+				+0.2
2,325,779	-				-1.1
2,325,779	-				+2.4
2,325,809	+				+1.7
2,325,810	-				+0.9
2,325,810	-				+0.1
2,325,810	-				+0.7
2,325,810	-				+0.9
2,325,810	-				+0.9
2,325,815	+				+0.3
2,325,815	+				+0.4
2,325,816	-				+0.5
2,325,816	-				-0.0
2,325,816	-				+2.1
2,325,818	+				-1.6
2,325,818	+				-0.6
2,325,818	+				+0.7
2,325,819	-				+0.3
2,325,844	+				+0.4
2,325,844	+				-0.3
2,325,845	-				-2.7
2,325,845	-				-0.7
2,325,869	+				-0.0
2,325,869	+				-0.6
2,325,870	-				-1.5
2,325,870	-				-0.6