Strain Fitness in Pantoea sp. MT58 around IAI47_00515

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
118,088	-				-2.4
118,088	-				-3.5
118,088	-				-1.8
118,197	-		IAI47_00515	0.31	+0.6
118,250	-		IAI47_00515	0.50	-1.4
118,250	-		IAI47_00515	0.50	-1.8
118,250	-		IAI47_00515	0.50	-1.8
118,256	-		IAI47_00515	0.52	+0.2
118,388	-				-1.9
118,388	-				-0.8
118,388	-				-2.1
118,388	-				-2.1
118,388	-				-1.8
118,388	-				-1.8
118,388	-				-1.1
118,388	-				-0.6
118,397	-				-1.8
118,397	-				+1.2
118,397	-				-0.3
118,429	-				+0.4
118,429	-				-0.8
118,429	-				+0.5
118,429	-				-0.2
118,440	-				+2.2
118,440	-				+0.2
119,111	-				+3.2
119,111	-				-1.3
119,111	-				+0.6
119,113	-				+1.8
119,113	-				-0.8
119,113	-				-0.5
119,113	-				+1.1
119,113	-				+0.8
119,113	-				+1.8
119,113	-				+0.0
119,201	+				+0.2
119,201	+				-0.1
119,201	+				-0.4
119,201	+				-0.8
119,202	-				-0.3
119,202	-				-0.1
119,217	-				-0.5
119,262	+				+0.2
119,262	+				-0.4
119,262	+				-0.8
119,263	-				+0.8
119,263	-				+0.6
119,305	+				-1.1
119,305	+				+0.4
119,305	+				+0.7
119,305	+				+0.3
119,306	-				-0.6
119,306	-				+0.2
119,306	-				+0.1
119,306	-				-0.6