Strain Fitness in Pantoea sp. MT58 around IAI47_12945

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,737,290	+		IAI47_12935	0.53	+0.0
2,737,291	-		IAI47_12935	0.53	-0.3
2,737,291	-		IAI47_12935	0.53	-0.1
2,737,291	-		IAI47_12935	0.53	-1.7
2,737,291	-		IAI47_12935	0.53	+0.2
2,737,353	+		IAI47_12935	0.62	-1.9
2,737,353	+		IAI47_12935	0.62	-0.8
2,737,353	+		IAI47_12935	0.62	+0.2
2,737,353	+		IAI47_12935	0.62	-0.3
2,737,354	-		IAI47_12935	0.62	-2.1
2,737,354	-		IAI47_12935	0.62	-0.8
2,737,354	-		IAI47_12935	0.62	-2.0
2,737,490	+		IAI47_12935	0.82	-0.4
2,737,490	+		IAI47_12935	0.82	-0.2
2,737,491	-		IAI47_12935	0.82	-3.0
2,737,510	+		IAI47_12935	0.85	-0.9
2,737,539	+		IAI47_12935	0.89	-1.8
2,737,548	+				+0.5
2,737,548	+				+0.2
2,737,549	-				-0.4
2,737,549	-				-0.2
2,737,549	-				-1.5
2,737,549	-				-1.4
2,737,552	+				-1.1
2,737,552	+				-1.0
2,737,552	+				+1.2
2,737,552	+				-1.0
2,737,552	+				-1.4
2,737,553	-				-0.8
2,737,553	-				-2.2
2,737,553	-				+0.6
2,737,553	-				-1.4
2,737,553	-				+0.5
2,737,617	+				+0.5
2,737,638	+				-0.1
2,737,648	+				-1.8
2,737,648	+				+0.5
2,737,656	-				-0.7
2,737,656	-				-1.3
2,737,660	+				-0.6
2,737,674	-				+0.8
2,737,694	+				+0.8
2,737,773	+				-1.1
2,737,773	+				-1.4
2,737,783	+				+0.7
2,737,784	-				-0.4
2,737,792	-				+0.6
2,737,813	+				+1.0
2,737,813	+				+0.0
2,737,813	+				-1.5
2,737,813	+				+1.9
2,737,813	+				+1.1
2,737,814	-				+0.6
2,737,814	-				+2.0
2,737,814	-				+0.7
2,737,822	+				-1.3
2,737,841	+				+1.1
2,737,841	+				-0.8
2,737,841	+				-0.8
2,737,841	+				-0.2
2,737,842	-				+1.9
2,737,842	-				-0.0
2,738,185	+				-0.9
2,738,185	+				+0.9
2,738,214	+				+1.2
2,738,229	+				-0.4
2,738,229	+				-0.4
2,738,268	+				+3.0
2,738,269	-				+0.9
2,738,269	-				+0.8
2,738,317	-				-0.8
2,738,317	-				-2.7
2,738,317	-				-0.1
2,738,354	+				-1.3
2,738,355	-				-1.2
2,738,463	+				+1.2
2,738,464	-				-1.4
2,738,464	-				-2.4
2,738,464	-				-0.8
2,738,552	-		IAI47_12945	0.13	-1.4
2,738,639	-		IAI47_12945	0.16	-0.8
2,738,705	-		IAI47_12945	0.19	+0.2
2,738,782	+		IAI47_12945	0.23	-0.6
2,738,782	+		IAI47_12945	0.23	-1.3
2,738,782	+		IAI47_12945	0.23	-1.0
2,738,782	+		IAI47_12945	0.23	+0.2
2,738,782	+		IAI47_12945	0.23	-0.6
2,738,783	-		IAI47_12945	0.23	+0.2
2,738,783	-		IAI47_12945	0.23	-0.8
2,738,783	-		IAI47_12945	0.23	-0.6
2,738,783	-		IAI47_12945	0.23	-0.5
2,738,862	-		IAI47_12945	0.26	-1.8
2,738,862	-		IAI47_12945	0.26	-0.3
2,738,862	-		IAI47_12945	0.26	-0.4
2,738,862	-		IAI47_12945	0.26	-0.8
2,738,976	+		IAI47_12945	0.31	-0.4
2,738,976	+		IAI47_12945	0.31	-0.1
2,738,976	+		IAI47_12945	0.31	+0.6
2,738,976	+		IAI47_12945	0.31	-0.6
2,738,976	+		IAI47_12945	0.31	-1.6
2,738,976	+		IAI47_12945	0.31	-1.4
2,738,977	-		IAI47_12945	0.31	-0.9
2,738,977	-		IAI47_12945	0.31	+0.2
2,738,977	-		IAI47_12945	0.31	+0.5
2,738,977	-		IAI47_12945	0.31	-2.9
2,738,986	+		IAI47_12945	0.32	-1.4
2,738,987	-		IAI47_12945	0.32	-0.1
2,738,987	-		IAI47_12945	0.32	-0.1
2,738,987	-		IAI47_12945	0.32	-2.8
2,739,047	-		IAI47_12945	0.34	-0.6
2,739,206	-		IAI47_12945	0.41	-0.8
2,739,242	-		IAI47_12945	0.43	-1.1
2,739,242	-		IAI47_12945	0.43	-1.0
2,739,295	+		IAI47_12945	0.45	-0.8
2,739,295	+		IAI47_12945	0.45	-2.1
2,739,296	-		IAI47_12945	0.45	+0.5
2,739,383	-		IAI47_12945	0.49	-2.1
2,739,384	+		IAI47_12945	0.49	-1.2
2,739,384	+		IAI47_12945	0.49	-0.0
2,739,384	+		IAI47_12945	0.49	-0.6
2,739,385	-		IAI47_12945	0.49	-0.7
2,739,385	-		IAI47_12945	0.49	-1.8
2,739,429	+		IAI47_12945	0.51	-2.6
2,739,430	-		IAI47_12945	0.51	-0.8
2,739,453	+		IAI47_12945	0.52	-2.3
2,739,453	+		IAI47_12945	0.52	-0.6
2,739,453	+		IAI47_12945	0.52	-0.4
2,739,453	+		IAI47_12945	0.52	-0.5
2,739,453	+		IAI47_12945	0.52	-0.4
2,739,453	+		IAI47_12945	0.52	-0.3
2,739,454	-		IAI47_12945	0.52	-0.5
2,739,454	-		IAI47_12945	0.52	-1.5
2,739,512	-		IAI47_12945	0.55	-1.5
2,739,576	+		IAI47_12945	0.57	-2.0
2,739,577	-		IAI47_12945	0.58	+0.6
2,739,577	-		IAI47_12945	0.58	-1.0
2,739,583	+		IAI47_12945	0.58	-3.0
2,739,584	-		IAI47_12945	0.58	+0.2
2,739,584	-		IAI47_12945	0.58	-2.1
2,739,625	+		IAI47_12945	0.60	-0.3
2,739,625	+		IAI47_12945	0.60	-0.1
2,739,644	+		IAI47_12945	0.60	-1.0
2,739,644	+		IAI47_12945	0.60	-1.8
2,739,644	+		IAI47_12945	0.60	-0.6
2,739,682	+		IAI47_12945	0.62	-2.0
2,739,682	+		IAI47_12945	0.62	-0.2
2,739,683	-		IAI47_12945	0.62	-0.9
2,739,683	-		IAI47_12945	0.62	-2.1
2,739,698	-		IAI47_12945	0.63	-0.5
2,739,771	+		IAI47_12945	0.66	-0.6
2,739,771	+		IAI47_12945	0.66	-2.1
2,739,771	+		IAI47_12945	0.66	-1.8
2,739,772	-		IAI47_12945	0.66	+0.2
2,739,811	-		IAI47_12945	0.68	-0.6
2,739,814	+		IAI47_12945	0.68	+0.4
2,739,814	+		IAI47_12945	0.68	-1.0
2,739,814	+		IAI47_12945	0.68	-1.5
2,739,814	+		IAI47_12945	0.68	-1.0
2,739,839	+		IAI47_12945	0.69	-0.8
2,739,889	+		IAI47_12945	0.71	+0.2
2,739,890	-		IAI47_12945	0.71	+0.5
2,739,952	+		IAI47_12945	0.74	-1.0
2,739,952	+		IAI47_12945	0.74	-0.6
2,739,952	+		IAI47_12945	0.74	-1.8
2,739,952	+		IAI47_12945	0.74	-1.4
2,739,952	+		IAI47_12945	0.74	-1.1
2,739,952	+		IAI47_12945	0.74	-1.2
2,739,952	+		IAI47_12945	0.74	-0.9
2,739,952	+		IAI47_12945	0.74	-1.0
2,739,952	+		IAI47_12945	0.74	+0.2
2,739,953	-		IAI47_12945	0.74	-0.8
2,739,953	-		IAI47_12945	0.74	+0.2
2,739,953	-		IAI47_12945	0.74	-1.2
2,739,953	-		IAI47_12945	0.74	-1.0
2,739,953	-		IAI47_12945	0.74	-0.2
2,739,955	+		IAI47_12945	0.74	+1.5
2,739,955	+		IAI47_12945	0.74	-1.4
2,739,955	+		IAI47_12945	0.74	-0.6
2,739,955	+		IAI47_12945	0.74	-0.5
2,739,956	-		IAI47_12945	0.74	-1.0
2,740,018	+		IAI47_12945	0.77	-0.2
2,740,018	+		IAI47_12945	0.77	-0.8
2,740,018	+		IAI47_12945	0.77	-0.2
2,740,018	+		IAI47_12945	0.77	+0.6
2,740,019	-		IAI47_12945	0.77	-1.1
2,740,179	+		IAI47_12945	0.84	-0.4
2,740,179	+		IAI47_12945	0.84	-0.9
2,740,179	+		IAI47_12945	0.84	+1.4
2,740,180	-		IAI47_12945	0.84	-0.4
2,740,180	-		IAI47_12945	0.84	+0.2
2,740,180	-		IAI47_12945	0.84	-0.4
2,740,402	+				+1.2
2,740,435	+				+0.2
2,740,510	+				+0.0
2,740,511	-				+0.7
2,740,514	+				+0.9
2,740,515	-				-0.8
2,740,515	-				-1.8
2,740,544	+				+0.2
2,740,545	-				-0.6
2,740,545	-				+1.2
2,740,570	+				+0.3
2,740,570	+				-0.3
2,740,570	+				-1.8
2,740,571	-				-1.1
2,740,581	+				-0.1
2,740,581	+				-0.8
2,740,581	+				-1.1
2,740,582	-				-2.0
2,740,582	-				-0.8
2,740,582	-				-0.3
2,740,582	-				-0.1
2,740,582	-				+0.8
2,740,584	-				+0.9
2,740,584	-				+0.6
2,740,584	-				+0.2
2,740,613	+				-0.5
2,740,613	+				-0.9
2,740,614	-				-1.0
2,740,614	-				-1.3
2,740,645	+		IAI47_12950	0.15	-2.3
2,740,645	+		IAI47_12950	0.15	-1.1
2,740,645	+		IAI47_12950	0.15	-0.8
2,740,645	+		IAI47_12950	0.15	-0.8
2,740,645	+		IAI47_12950	0.15	-0.8
2,740,645	+		IAI47_12950	0.15	-0.5
2,740,646	-		IAI47_12950	0.16	+0.2
2,740,646	-		IAI47_12950	0.16	-0.6
2,740,646	-		IAI47_12950	0.16	-2.1
2,740,689	-		IAI47_12950	0.29	-0.9
2,740,689	-		IAI47_12950	0.29	+0.8
2,740,689	-		IAI47_12950	0.29	-1.4
2,740,692	+		IAI47_12950	0.30	-0.8
2,740,692	+		IAI47_12950	0.30	+0.2
2,740,692	+		IAI47_12950	0.30	-0.2
2,740,692	+		IAI47_12950	0.30	-1.1
2,740,692	+		IAI47_12950	0.30	-1.8
2,740,693	-		IAI47_12950	0.30	-0.1
2,740,693	-		IAI47_12950	0.30	+1.8
2,740,693	-		IAI47_12950	0.30	+0.4
2,740,693	-		IAI47_12950	0.30	-0.8
2,740,717	+		IAI47_12950	0.38	-0.8
2,740,717	+		IAI47_12950	0.38	+1.2
2,740,718	-		IAI47_12950	0.38	-1.7
2,740,759	+		IAI47_12950	0.51	-3.6
2,740,759	+		IAI47_12950	0.51	-0.4
2,740,760	-		IAI47_12950	0.51	+0.2
2,740,760	-		IAI47_12950	0.51	+0.2
2,740,787	+		IAI47_12950	0.60	-0.8
2,740,787	+		IAI47_12950	0.60	-0.5
2,740,788	-		IAI47_12950	0.60	-0.5
2,740,788	-		IAI47_12950	0.60	+0.2
2,740,799	+		IAI47_12950	0.63	-0.5
2,740,799	+		IAI47_12950	0.63	+0.2
2,740,800	-		IAI47_12950	0.64	+0.3
2,740,800	-		IAI47_12950	0.64	-0.8
2,740,800	-		IAI47_12950	0.64	+0.8
2,740,800	-		IAI47_12950	0.64	-0.1
2,740,800	-		IAI47_12950	0.64	-1.8
2,740,805	+		IAI47_12950	0.65	+0.8
2,740,805	+		IAI47_12950	0.65	-1.7
2,740,805	+		IAI47_12950	0.65	-0.6
2,740,805	+		IAI47_12950	0.65	-0.3
2,740,805	+		IAI47_12950	0.65	-0.3
2,740,805	+		IAI47_12950	0.65	+0.4
2,740,805	+		IAI47_12950	0.65	-1.4
2,740,805	+		IAI47_12950	0.65	-0.7
2,740,805	+		IAI47_12950	0.65	+0.2
2,740,805	+		IAI47_12950	0.65	-0.5
2,740,806	-		IAI47_12950	0.65	-0.8
2,740,806	-		IAI47_12950	0.65	-1.5
2,740,806	-		IAI47_12950	0.65	-0.0
2,740,806	-		IAI47_12950	0.65	-1.6
2,740,806	-		IAI47_12950	0.65	-0.2
2,740,806	-		IAI47_12950	0.65	-0.1
2,740,806	-		IAI47_12950	0.65	-0.5
2,740,806	-		IAI47_12950	0.65	-0.3
2,740,806	-		IAI47_12950	0.65	-0.6
2,740,806	-		IAI47_12950	0.65	+1.8
2,740,806	-		IAI47_12950	0.65	+0.6
2,740,806	-		IAI47_12950	0.65	+0.2
2,740,807	+		IAI47_12950	0.66	-0.9
2,740,807	+		IAI47_12950	0.66	+2.2
2,740,807	+		IAI47_12950	0.66	-0.9
2,740,807	+		IAI47_12950	0.66	-0.9
2,740,807	+		IAI47_12950	0.66	-0.4
2,740,808	-		IAI47_12950	0.66	-0.4
2,740,808	-		IAI47_12950	0.66	-2.1
2,740,833	-		IAI47_12950	0.74	-0.4
2,740,833	-		IAI47_12950	0.74	-1.5
2,740,833	-		IAI47_12950	0.74	+0.2
2,740,833	-		IAI47_12950	0.74	-0.1
2,740,833	-		IAI47_12950	0.74	-1.8
2,740,833	-		IAI47_12950	0.74	+0.0
2,740,834	+		IAI47_12950	0.74	-0.8
2,740,834	+		IAI47_12950	0.74	+1.0
2,740,834	+		IAI47_12950	0.74	-0.7
2,740,834	+		IAI47_12950	0.74	-0.6
2,740,834	+		IAI47_12950	0.74	-0.4
2,740,835	-		IAI47_12950	0.74	+0.1
2,740,835	-		IAI47_12950	0.74	+0.4
2,740,835	-		IAI47_12950	0.74	+0.2
2,740,835	-		IAI47_12950	0.74	-1.1
2,740,835	-		IAI47_12950	0.74	-0.3
2,740,835	-		IAI47_12950	0.74	+0.6
2,740,838	+		IAI47_12950	0.75	+0.9
2,740,838	+		IAI47_12950	0.75	-1.2
2,740,838	+		IAI47_12950	0.75	-1.4
2,740,838	+		IAI47_12950	0.75	-0.1
2,740,838	+		IAI47_12950	0.75	-1.1
2,740,838	+		IAI47_12950	0.75	+1.0
2,740,838	+		IAI47_12950	0.75	+0.2
2,740,838	+		IAI47_12950	0.75	+1.1
2,740,838	+		IAI47_12950	0.75	-0.4
2,740,838	+		IAI47_12950	0.75	+0.1
2,740,838	+		IAI47_12950	0.75	-0.6
2,740,838	+		IAI47_12950	0.75	-0.1
2,740,838	+		IAI47_12950	0.75	-0.4
2,740,838	+		IAI47_12950	0.75	-0.6
2,740,838	+		IAI47_12950	0.75	+1.2
2,740,838	+		IAI47_12950	0.75	-1.5
2,740,838	+		IAI47_12950	0.75	-0.5
2,740,838	+		IAI47_12950	0.75	-0.6
2,740,839	-		IAI47_12950	0.76	-1.5
2,740,839	-		IAI47_12950	0.76	-1.4
2,740,839	-		IAI47_12950	0.76	+0.4
2,740,839	-		IAI47_12950	0.76	-0.5
2,740,839	-		IAI47_12950	0.76	-0.5
2,740,839	-		IAI47_12950	0.76	-1.5
2,740,839	-		IAI47_12950	0.76	-2.4
2,740,839	-		IAI47_12950	0.76	-1.8
2,740,839	-		IAI47_12950	0.76	-0.1
2,740,839	-		IAI47_12950	0.76	-0.3
2,740,839	-		IAI47_12950	0.76	-1.2
2,740,839	-		IAI47_12950	0.76	-0.8
2,740,839	-		IAI47_12950	0.76	+0.2
2,740,839	-		IAI47_12950	0.76	-0.5
2,740,839	-		IAI47_12950	0.76	+0.2
2,740,839	-		IAI47_12950	0.76	-1.1
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