Strain Fitness in Pantoea sp. MT58 around IAI47_14650

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
3,090,453	-				-0.1
3,090,453	-				-0.1
3,090,490	-				+0.6
3,090,490	-				+0.6
3,090,490	-				-0.8
3,090,490	-				-0.6
3,090,510	-				-0.1
3,090,518	-				-0.2
3,090,518	-				-0.3
3,090,518	-				-0.0
3,090,518	-				+0.3
3,090,518	-				+0.1
3,090,518	-				-1.8
3,090,518	-				+0.7
3,090,518	-				+0.6
3,090,518	-				-1.4
3,090,518	-				-0.2
3,090,518	-				-0.8
3,090,520	-				-1.0
3,090,520	-				+0.5
3,090,592	+				+0.4
3,090,593	-				+0.1
3,090,595	+				+0.1
3,090,595	+				-1.8
3,090,596	-				-0.7
3,090,651	-				+0.6
3,090,651	-				+0.2
3,090,651	-				-0.9
3,090,651	-				+0.1
3,091,922	-				+0.2
3,091,930	-				-1.2
3,091,974	-				-0.4
3,091,974	-				-0.4
3,091,977	-				+0.2
3,091,977	-				-0.8
3,091,980	-				-0.8
3,091,980	-				+0.2
3,091,980	-				+0.2
3,091,994	-				-0.4
3,091,994	-				-1.6
3,091,994	-				+0.2
3,091,998	-				-0.4
3,091,998	-				-0.9
3,091,998	-				+0.8
3,091,998	-				-0.1
3,091,998	-				+0.2
3,091,998	-				+1.0
3,091,998	-				-3.2
3,091,998	-				-0.5
3,091,998	-				-1.0
3,092,000	-				+0.2
3,092,017	-				-1.8
3,092,017	-				+0.8
3,092,017	-				-0.1
3,092,017	-				-0.8
3,092,017	-				-1.1
3,092,029	-				-0.9
3,092,698	-				-0.6
3,092,702	-				+0.6
3,092,702	-				-0.4
3,092,785	-				+0.6
3,092,785	-				-1.1
3,092,794	-				+0.0
3,092,825	+				+1.2
3,092,825	+				+0.2
3,092,826	-				-0.6
3,092,885	-				+0.0
3,092,885	-				+0.8
3,092,888	+				+0.6
3,092,888	+				-0.8