Strain Fitness in Pantoea sp. MT58 around IAI47_13865

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
2,933,096	+				+0.1
2,933,097	-				+0.6
2,933,110	-				+1.5
2,933,111	+				-0.6
2,933,117	+				+1.0
2,933,118	-				-1.1
2,933,118	-				-0.4
2,933,148	+				+0.1
2,933,148	+				+0.3
2,933,148	+				+0.4
2,933,149	-				+0.1
2,933,156	-				-0.3
2,933,156	-				+1.0
2,933,161	-				-0.0
2,933,181	+				-1.7
2,933,182	-				+0.3
2,933,202	+				+2.1
2,933,202	+				+1.0
2,933,203	-				+0.5
2,933,203	-				-1.1
2,933,203	-				-0.1
2,933,203	-				+0.5
2,933,211	+				-1.6
2,933,211	+				+2.8
2,933,212	-				-0.3
2,933,212	-				-0.7
2,933,316	+				-0.6
2,933,316	+				-0.0
2,933,316	+				-0.7
2,933,316	+				+1.4
2,933,318	+				-0.0
2,933,344	+				+0.5
2,933,344	+				-0.7
2,933,384	+				-1.3
2,933,384	+				-3.1
2,933,384	+				-2.1
2,933,384	+				-3.1
2,933,384	+				-1.3
2,933,847	-				-0.6
2,933,938	+				-0.1
2,933,954	+		IAI47_13865	0.10	-1.3
2,933,954	+		IAI47_13865	0.10	+0.4
2,933,960	+		IAI47_13865	0.12	-0.2
2,933,960	+		IAI47_13865	0.12	-0.5
2,933,960	+		IAI47_13865	0.12	+0.5
2,933,960	+		IAI47_13865	0.12	+0.2
2,933,960	+		IAI47_13865	0.12	-0.2
2,933,961	-		IAI47_13865	0.12	+0.2
2,933,961	-		IAI47_13865	0.12	+1.1
2,933,961	-		IAI47_13865	0.12	+0.8
2,933,961	-		IAI47_13865	0.12	-0.1
2,933,993	+		IAI47_13865	0.20	-0.1
2,933,993	+		IAI47_13865	0.20	-3.0
2,933,994	-		IAI47_13865	0.20	-0.3
2,933,994	-		IAI47_13865	0.20	+1.3
2,933,999	+		IAI47_13865	0.22	-1.1
2,933,999	+		IAI47_13865	0.22	-0.9
2,934,000	-		IAI47_13865	0.22	-0.1
2,934,000	-		IAI47_13865	0.22	-0.7
2,934,000	-		IAI47_13865	0.22	-1.3
2,934,047	+		IAI47_13865	0.34	-1.3
2,934,047	+		IAI47_13865	0.34	-0.5
2,934,047	+		IAI47_13865	0.34	+0.2
2,934,047	+		IAI47_13865	0.34	+0.7
2,934,047	+		IAI47_13865	0.34	-0.1
2,934,048	-		IAI47_13865	0.34	+0.0
2,934,048	-		IAI47_13865	0.34	-1.3
2,934,048	-		IAI47_13865	0.34	-0.3
2,934,148	+		IAI47_13865	0.59	+0.3
2,934,148	+		IAI47_13865	0.59	+0.7
2,934,149	-		IAI47_13865	0.60	+0.3
2,934,161	+		IAI47_13865	0.63	-1.0
2,934,193	+		IAI47_13865	0.71	-0.4
2,934,194	-		IAI47_13865	0.71	-0.2
2,934,194	-		IAI47_13865	0.71	+2.1
2,934,237	-		IAI47_13865	0.82	-0.6
2,934,237	-		IAI47_13865	0.82	+0.7
2,934,240	-		IAI47_13865	0.83	-0.7
2,934,240	-		IAI47_13865	0.83	+0.6
2,934,240	-		IAI47_13865	0.83	+0.1
2,934,246	-		IAI47_13865	0.84	+0.1
2,934,265	-		IAI47_13865	0.89	-0.3
2,934,324	-				+0.8
2,934,324	-				-0.5
2,934,352	+				+0.7
2,934,352	+				+1.8
2,934,353	-				-0.2
2,934,353	-				-0.5
2,934,353	-				+0.3
2,934,357	+				-0.7
2,934,357	+				+1.6
2,934,357	+				+0.0
2,934,358	-				+1.0
2,934,358	-				+0.1
2,934,424	+				-0.7
2,934,424	+				+0.1
2,934,433	+				-0.6
2,934,433	+				-1.0
2,934,448	-				-0.6
2,934,488	+				+0.8
2,934,502	-				-0.2
2,934,522	+				+0.5
2,934,523	-				-1.1
2,934,523	-				-0.7
2,934,523	-				+0.1
2,934,523	-				-0.9
2,934,544	+				-1.2
2,934,545	-				-0.2
2,934,566	+				-0.3