Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18230 and AZOBR_RS18235 are separated by 399 nucleotides AZOBR_RS18235 and AZOBR_RS18240 are separated by 209 nucleotides AZOBR_RS18240 and AZOBR_RS18245 are separated by 9 nucleotides
AZOBR_RS18230: AZOBR_RS18230 - hypothetical protein, at 855,012 to 857,963
_RS18230
AZOBR_RS18235: AZOBR_RS18235 - hypothetical protein, at 858,363 to 858,860
_RS18235
AZOBR_RS18240: AZOBR_RS18240 - hypothetical protein, at 859,070 to 859,831
_RS18240
AZOBR_RS18245: AZOBR_RS18245 - putative fused multidrug transport subunits of ABC superfamily transporter: permease component/ATP-binding component, at 859,841 to 861,565
_RS18245
Position (kb) 858
859 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 857.377 kb on - strand, within AZOBR_RS18230 at 857.517 kb on + strand, within AZOBR_RS18230 at 858.066 kb on + strand at 858.067 kb on - strand at 858.067 kb on - strand at 858.077 kb on + strand at 858.110 kb on + strand at 858.111 kb on - strand at 858.349 kb on + strand at 858.350 kb on - strand at 858.384 kb on + strand at 858.393 kb on + strand at 858.393 kb on + strand at 858.393 kb on + strand at 858.394 kb on - strand at 858.394 kb on - strand at 858.394 kb on - strand at 858.476 kb on + strand, within AZOBR_RS18235 at 858.477 kb on - strand, within AZOBR_RS18235 at 858.492 kb on + strand, within AZOBR_RS18235 at 858.492 kb on + strand, within AZOBR_RS18235 at 858.918 kb on + strand at 858.919 kb on - strand at 858.981 kb on + strand at 858.981 kb on + strand at 858.982 kb on - strand at 859.206 kb on - strand, within AZOBR_RS18240 at 859.211 kb on + strand, within AZOBR_RS18240 at 859.211 kb on + strand, within AZOBR_RS18240 at 859.212 kb on - strand, within AZOBR_RS18240 at 859.212 kb on - strand, within AZOBR_RS18240 at 859.212 kb on - strand, within AZOBR_RS18240 at 859.391 kb on + strand, within AZOBR_RS18240 at 859.392 kb on - strand, within AZOBR_RS18240 at 859.392 kb on - strand, within AZOBR_RS18240 at 859.392 kb on - strand, within AZOBR_RS18240 at 859.544 kb on + strand, within AZOBR_RS18240 at 859.545 kb on - strand, within AZOBR_RS18240 at 859.545 kb on - strand, within AZOBR_RS18240 at 859.715 kb on + strand, within AZOBR_RS18240 at 859.715 kb on + strand, within AZOBR_RS18240 at 859.715 kb on + strand, within AZOBR_RS18240 at 859.716 kb on - strand, within AZOBR_RS18240
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 857,377 - AZOBR_RS18230 0.80 +0.8 857,517 + AZOBR_RS18230 0.85 -0.1 858,066 + -2.2 858,067 - -0.6 858,067 - -0.2 858,077 + +1.5 858,110 + -0.3 858,111 - +0.3 858,349 + -2.9 858,350 - -0.5 858,384 + +0.5 858,393 + -0.4 858,393 + +0.5 858,393 + -0.9 858,394 - +2.1 858,394 - -1.5 858,394 - +0.5 858,476 + AZOBR_RS18235 0.23 -0.2 858,477 - AZOBR_RS18235 0.23 +0.4 858,492 + AZOBR_RS18235 0.26 -0.0 858,492 + AZOBR_RS18235 0.26 -0.1 858,918 + +0.0 858,919 - +1.1 858,981 + -0.2 858,981 + +0.1 858,982 - -1.2 859,206 - AZOBR_RS18240 0.18 +0.4 859,211 + AZOBR_RS18240 0.19 -0.3 859,211 + AZOBR_RS18240 0.19 -0.0 859,212 - AZOBR_RS18240 0.19 +0.1 859,212 - AZOBR_RS18240 0.19 -0.5 859,212 - AZOBR_RS18240 0.19 -0.1 859,391 + AZOBR_RS18240 0.42 -0.7 859,392 - AZOBR_RS18240 0.42 -0.2 859,392 - AZOBR_RS18240 0.42 +0.3 859,392 - AZOBR_RS18240 0.42 -0.3 859,544 + AZOBR_RS18240 0.62 +0.0 859,545 - AZOBR_RS18240 0.62 -0.0 859,545 - AZOBR_RS18240 0.62 +0.1 859,715 + AZOBR_RS18240 0.85 -0.2 859,715 + AZOBR_RS18240 0.85 -0.3 859,715 + AZOBR_RS18240 0.85 -0.4 859,716 - AZOBR_RS18240 0.85 +0.0
Or see this region's nucleotide sequence