Strain Fitness in Pantoea sp. MT58 around IAI47_09885

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
2,093,003	+		IAI47_09880	0.56	-1.2
2,093,116	-		IAI47_09880	0.61	-0.3
2,093,124	+		IAI47_09880	0.62	+0.6
2,093,124	+		IAI47_09880	0.62	+0.2
2,093,125	-		IAI47_09880	0.62	-0.4
2,093,125	-		IAI47_09880	0.62	+3.1
2,093,125	-		IAI47_09880	0.62	+0.1
2,093,125	-		IAI47_09880	0.62	-0.1
2,093,125	-		IAI47_09880	0.62	-0.6
2,093,125	-		IAI47_09880	0.62	+1.8
2,093,166	+		IAI47_09880	0.63	+0.2
2,093,166	+		IAI47_09880	0.63	+1.4
2,093,166	+		IAI47_09880	0.63	-1.3
2,093,166	+		IAI47_09880	0.63	-0.3
2,093,167	-		IAI47_09880	0.64	+2.9
2,093,194	+		IAI47_09880	0.65	+0.1
2,093,194	+		IAI47_09880	0.65	+0.3
2,093,194	+		IAI47_09880	0.65	-0.6
2,093,194	+		IAI47_09880	0.65	+0.6
2,093,195	-		IAI47_09880	0.65	+0.8
2,093,213	+		IAI47_09880	0.66	+0.3
2,093,214	-		IAI47_09880	0.66	+0.5
2,093,235	+		IAI47_09880	0.67	-0.3
2,093,235	+		IAI47_09880	0.67	+1.1
2,093,469	+		IAI47_09880	0.77	+0.8
2,093,469	+		IAI47_09880	0.77	+0.1
2,093,469	+		IAI47_09880	0.77	+0.1
2,093,470	-		IAI47_09880	0.77	-0.6
2,093,470	-		IAI47_09880	0.77	-0.3
2,093,470	-		IAI47_09880	0.77	+1.5
2,093,470	-		IAI47_09880	0.77	+1.2
2,093,470	-		IAI47_09880	0.77	-0.4
2,093,481	+		IAI47_09880	0.78	-0.7
2,093,481	+		IAI47_09880	0.78	+0.7
2,093,481	+		IAI47_09880	0.78	+0.7
2,093,481	+		IAI47_09880	0.78	-1.5
2,093,481	+		IAI47_09880	0.78	-0.4
2,093,482	-		IAI47_09880	0.78	+0.6
2,093,482	-		IAI47_09880	0.78	+0.1
2,093,482	-		IAI47_09880	0.78	-1.1
2,093,482	-		IAI47_09880	0.78	+1.4
2,093,483	+		IAI47_09880	0.78	-0.3
2,093,484	-		IAI47_09880	0.78	+0.4
2,093,547	-		IAI47_09880	0.81	-1.0
2,093,547	-		IAI47_09880	0.81	-0.1
2,093,549	+		IAI47_09880	0.81	-3.1
2,093,549	+		IAI47_09880	0.81	+1.7
2,093,549	+		IAI47_09880	0.81	-1.1
2,093,549	+		IAI47_09880	0.81	-1.5
2,093,550	-		IAI47_09880	0.81	-0.5
2,093,597	+		IAI47_09880	0.83	-2.5
2,093,598	-		IAI47_09880	0.83	-1.9
2,093,703	+		IAI47_09880	0.88	+1.7
2,093,703	+		IAI47_09880	0.88	+0.3
2,093,703	+		IAI47_09880	0.88	+0.8
2,093,703	+		IAI47_09880	0.88	+2.2
2,093,703	+		IAI47_09880	0.88	-0.5
2,093,704	-		IAI47_09880	0.88	+1.1
2,093,704	-		IAI47_09880	0.88	-0.9
2,093,722	+		IAI47_09880	0.88	+2.9
2,093,763	+				+0.1
2,093,763	+				-0.2
2,093,764	-				-0.7
2,093,781	+				+0.2
2,093,781	+				+0.1
2,093,782	-				-2.3
2,093,782	-				-0.3
2,093,782	-				+0.5
2,093,782	-				-1.2
2,093,830	-				-0.9
2,093,830	-				-0.9
2,093,830	-				-0.7
2,093,830	-				-0.8
2,093,860	+				+0.7
2,093,861	-				-0.3
2,093,861	-				+1.1
2,093,866	+				+0.6
2,093,866	+				+1.5
2,093,866	+				-0.3
2,093,866	+				-0.8
2,093,866	+				+0.1
2,093,866	+				+0.1
2,093,867	-				+0.6
2,093,867	-				-1.5
2,093,909	+				+1.1
2,093,909	+				-2.1
2,093,975	-				+1.3
2,093,975	-				-0.4
2,094,037	+				+2.2
2,094,066	+				-1.1
2,094,066	+				+0.6
2,094,067	-				-0.7
2,094,118	+		IAI47_09885	0.13	-0.2
2,094,118	+		IAI47_09885	0.13	+0.1
2,094,240	-		IAI47_09885	0.25	+1.1
2,094,240	-		IAI47_09885	0.25	+0.4
2,094,266	-		IAI47_09885	0.27	-0.2
2,094,281	+		IAI47_09885	0.29	+0.3
2,094,412	+		IAI47_09885	0.41	-0.2
2,094,413	-		IAI47_09885	0.41	-0.7
2,094,545	-		IAI47_09885	0.54	+1.4
2,094,545	-		IAI47_09885	0.54	-1.2
2,094,554	+		IAI47_09885	0.55	+0.3
2,094,554	+		IAI47_09885	0.55	-0.2
2,094,554	+		IAI47_09885	0.55	+0.7
2,094,554	+		IAI47_09885	0.55	-0.7
2,094,554	+		IAI47_09885	0.55	-0.4
2,094,554	+		IAI47_09885	0.55	-0.5
2,094,555	-		IAI47_09885	0.55	-0.3
2,094,555	-		IAI47_09885	0.55	+0.5
2,094,555	-		IAI47_09885	0.55	+0.4
2,094,555	-		IAI47_09885	0.55	+0.3
2,094,555	-		IAI47_09885	0.55	+0.1
2,094,601	+		IAI47_09885	0.59	-0.3
2,094,601	+		IAI47_09885	0.59	+1.1
2,094,601	+		IAI47_09885	0.59	-1.7
2,094,601	+		IAI47_09885	0.59	-0.6
2,094,601	+		IAI47_09885	0.59	+0.2
2,094,601	+		IAI47_09885	0.59	+0.8
2,094,601	+		IAI47_09885	0.59	+1.7
2,094,602	-		IAI47_09885	0.59	-1.5
2,094,602	-		IAI47_09885	0.59	+1.4
2,094,602	-		IAI47_09885	0.59	-0.4
2,094,602	-		IAI47_09885	0.59	+2.1
2,094,602	-		IAI47_09885	0.59	+3.2
2,094,623	-		IAI47_09885	0.61	-1.1
2,094,653	+		IAI47_09885	0.64	-0.5
2,094,653	+		IAI47_09885	0.64	-0.7
2,094,654	-		IAI47_09885	0.64	-1.3
2,094,654	-		IAI47_09885	0.64	+0.1
2,094,654	-		IAI47_09885	0.64	-0.3
2,094,654	-		IAI47_09885	0.64	+1.2
2,094,676	+		IAI47_09885	0.66	+0.3
2,094,677	-		IAI47_09885	0.66	+0.1
2,094,703	+		IAI47_09885	0.69	+0.2
2,094,704	-		IAI47_09885	0.69	+0.2
2,094,794	-		IAI47_09885	0.77	+0.1
2,094,832	+		IAI47_09885	0.81	-0.3
2,094,833	-		IAI47_09885	0.81	-1.7
2,094,835	+		IAI47_09885	0.81	-0.6
2,094,835	+		IAI47_09885	0.81	+1.4
2,094,835	+		IAI47_09885	0.81	+0.2
2,094,835	+		IAI47_09885	0.81	+0.7
2,094,835	+		IAI47_09885	0.81	-1.9
2,094,835	+		IAI47_09885	0.81	-0.7
2,094,835	+		IAI47_09885	0.81	-0.2
2,094,835	+		IAI47_09885	0.81	-0.9
2,094,835	+		IAI47_09885	0.81	+0.5
2,094,836	-		IAI47_09885	0.81	-1.7
2,094,836	-		IAI47_09885	0.81	-1.5
2,094,836	-		IAI47_09885	0.81	-1.2
2,094,836	-		IAI47_09885	0.81	+0.9
2,094,904	+		IAI47_09885	0.87	-1.3
2,094,905	-		IAI47_09885	0.88	-1.3
2,094,905	-		IAI47_09885	0.88	-0.7
2,094,911	+		IAI47_09885	0.88	-0.5
2,094,911	+		IAI47_09885	0.88	+2.2
2,094,912	-		IAI47_09885	0.88	+0.1
2,094,990	+				-0.9
2,094,990	+				-1.9
2,094,990	+				+0.6
2,094,991	-				+0.5
2,094,991	-				+0.1
2,094,991	-				-0.2
2,094,991	-				+0.3
2,095,003	+				-0.1
2,095,004	-				-2.1
2,095,004	-				-0.9
2,095,004	-				+1.4
2,095,004	-				-0.4
2,095,034	+				+0.8
2,095,097	+				+0.2
2,095,137	-				-0.7
2,095,170	-		IAI47_09890	0.14	+0.7
2,095,220	+		IAI47_09890	0.20	-1.7
2,095,221	-		IAI47_09890	0.20	-0.2
2,095,221	-		IAI47_09890	0.20	-1.2
2,095,221	-		IAI47_09890	0.20	-1.3
2,095,244	+		IAI47_09890	0.23	+1.1
2,095,245	-		IAI47_09890	0.23	+1.1
2,095,245	-		IAI47_09890	0.23	+1.1
2,095,312	+		IAI47_09890	0.32	-0.7
2,095,312	+		IAI47_09890	0.32	+0.8
2,095,438	+		IAI47_09890	0.48	-1.1
2,095,438	+		IAI47_09890	0.48	-1.0
2,095,439	-		IAI47_09890	0.48	-1.5
2,095,439	-		IAI47_09890	0.48	+0.5
2,095,450	+		IAI47_09890	0.49	+1.5
2,095,450	+		IAI47_09890	0.49	-0.3
2,095,450	+		IAI47_09890	0.49	+1.7
2,095,450	+		IAI47_09890	0.49	+0.1
2,095,450	+		IAI47_09890	0.49	-1.5
2,095,450	+		IAI47_09890	0.49	+1.5
2,095,450	+		IAI47_09890	0.49	-1.0
2,095,450	+		IAI47_09890	0.49	-0.2
2,095,451	-		IAI47_09890	0.49	+0.2
2,095,451	-		IAI47_09890	0.49	-0.3
2,095,451	-		IAI47_09890	0.49	-1.3
2,095,555	+		IAI47_09890	0.62	+0.1
2,095,555	+		IAI47_09890	0.62	-0.1
2,095,555	+		IAI47_09890	0.62	-0.5
2,095,555	+		IAI47_09890	0.62	+0.5
2,095,555	+		IAI47_09890	0.62	-0.3
2,095,555	+		IAI47_09890	0.62	-1.1
2,095,555	+		IAI47_09890	0.62	+0.7
2,095,556	-		IAI47_09890	0.62	+0.9
2,095,556	-		IAI47_09890	0.62	+2.5
2,095,556	-		IAI47_09890	0.62	+0.2
2,095,556	-		IAI47_09890	0.62	+0.4
2,095,556	-		IAI47_09890	0.62	+1.1
2,095,556	-		IAI47_09890	0.62	-0.5
2,095,556	-		IAI47_09890	0.62	+0.1
2,095,556	-		IAI47_09890	0.62	-0.9
2,095,556	-		IAI47_09890	0.62	-1.3
2,095,556	-		IAI47_09890	0.62	-0.9
2,095,611	+		IAI47_09890	0.69	-0.4
2,095,678	+		IAI47_09890	0.78	+0.4
2,095,679	-		IAI47_09890	0.78	-0.9
2,095,681	+		IAI47_09890	0.78	+0.3
2,095,681	+		IAI47_09890	0.78	+0.5
2,095,681	+		IAI47_09890	0.78	-0.1
2,095,682	-		IAI47_09890	0.78	-0.7
2,095,682	-		IAI47_09890	0.78	+2.7
2,095,682	-		IAI47_09890	0.78	+0.8
2,095,690	+		IAI47_09890	0.79	+0.3
2,095,690	+		IAI47_09890	0.79	-1.7
2,095,690	+		IAI47_09890	0.79	-0.3
2,095,690	+		IAI47_09890	0.79	+0.1
2,095,691	-		IAI47_09890	0.79	-0.2
2,095,691	-		IAI47_09890	0.79	-0.6
2,095,691	-		IAI47_09890	0.79	-0.5
2,095,691	-		IAI47_09890	0.79	-0.3
2,095,692	+		IAI47_09890	0.79	-0.5
2,095,692	+		IAI47_09890	0.79	+0.6
2,095,692	+		IAI47_09890	0.79	-2.9
2,095,692	+		IAI47_09890	0.79	+1.0
2,095,693	-		IAI47_09890	0.80	-3.1
2,095,693	-		IAI47_09890	0.80	-0.4
2,095,693	-		IAI47_09890	0.80	+0.6
2,095,693	-		IAI47_09890	0.80	-0.2
2,095,693	-		IAI47_09890	0.80	+0.3
2,095,693	-		IAI47_09890	0.80	-0.5
2,095,721	-		IAI47_09890	0.83	+0.2
2,095,750	+		IAI47_09890	0.87	-0.2
2,095,751	-		IAI47_09890	0.87	+0.3
2,095,840	-				-0.9
2,095,875	+				-1.2
2,095,876	-				-0.2
2,095,921	+				+0.9
2,095,921	+				-2.4
2,095,921	+				+0.5
2,095,922	-				-0.3
2,095,922	-				+1.4
2,095,935	-		IAI47_09895	0.12	-0.7
2,095,935	-		IAI47_09895	0.12	-0.3