Strain Fitness in Pantoea sp. MT58 around IAI47_18175

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
3,865,831	+				+0.3
3,865,831	+				+0.3
3,865,831	+				+1.1
3,865,831	+				-1.3
3,865,831	+				+0.1
3,865,831	+				-0.4
3,865,831	+				-0.1
3,866,773	+				-1.3
3,866,773	+				-0.7
3,866,773	+				+1.3
3,866,773	+				+0.3
3,866,773	+				-2.7
3,866,774	-				-1.7
3,866,774	-				-3.9
3,866,777	+				+0.9
3,866,777	+				+0.1
3,866,777	+				+0.8
3,866,778	-				+0.5
3,866,778	-				+1.0
3,866,789	+				+1.3
3,866,790	-				-0.4
3,866,804	+				-2.3
3,866,804	+				-1.0
3,866,804	+				-1.3
3,866,804	+				+1.1
3,866,805	-				+0.0
3,866,805	-				-1.3
3,866,805	-				-0.4
3,866,805	-				-1.3
3,866,834	+				-1.3
3,866,835	-				+1.9
3,866,835	-				+0.5
3,866,835	-				+2.8
3,866,835	-				+0.7
3,866,835	-				-0.2
3,866,835	-				+0.4