Strain Fitness in Pantoea sp. MT58 around IAI47_14045

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
2,967,789	-		IAI47_14040	0.28	-0.6
2,967,789	-		IAI47_14040	0.28	-0.6
2,967,789	-		IAI47_14040	0.28	-0.1
2,967,900	+		IAI47_14040	0.37	+0.0
2,967,900	+		IAI47_14040	0.37	-1.0
2,967,901	-		IAI47_14040	0.37	-0.1
2,967,901	-		IAI47_14040	0.37	-0.9
2,967,901	-		IAI47_14040	0.37	-0.1
2,967,945	+		IAI47_14040	0.41	+0.2
2,967,945	+		IAI47_14040	0.41	-0.8
2,967,945	+		IAI47_14040	0.41	-0.3
2,967,945	+		IAI47_14040	0.41	+1.9
2,967,946	-		IAI47_14040	0.41	+0.3
2,967,946	-		IAI47_14040	0.41	-1.0
2,967,946	-		IAI47_14040	0.41	-0.1
2,967,946	-		IAI47_14040	0.41	-1.2
2,967,946	-		IAI47_14040	0.41	-0.4
2,967,946	-		IAI47_14040	0.41	-1.2
2,967,972	-		IAI47_14040	0.43	-0.6
2,967,972	-		IAI47_14040	0.43	+0.4
2,968,014	+		IAI47_14040	0.46	-1.0
2,968,014	+		IAI47_14040	0.46	-1.0
2,968,014	+		IAI47_14040	0.46	-2.0
2,968,015	-		IAI47_14040	0.46	-1.6
2,968,015	-		IAI47_14040	0.46	+0.8
2,968,015	-		IAI47_14040	0.46	-1.0
2,968,015	-		IAI47_14040	0.46	-0.2
2,968,015	-		IAI47_14040	0.46	-0.6
2,968,077	+		IAI47_14040	0.51	+0.1
2,968,077	+		IAI47_14040	0.51	-2.6
2,968,077	+		IAI47_14040	0.51	-3.0
2,968,077	+		IAI47_14040	0.51	-1.0
2,968,077	+		IAI47_14040	0.51	+0.6
2,968,077	+		IAI47_14040	0.51	+0.5
2,968,077	+		IAI47_14040	0.51	+0.4
2,968,077	+		IAI47_14040	0.51	+1.4
2,968,077	+		IAI47_14040	0.51	+0.0
2,968,078	-		IAI47_14040	0.52	+0.1
2,968,078	-		IAI47_14040	0.52	-0.3
2,968,078	-		IAI47_14040	0.52	+1.2
2,968,078	-		IAI47_14040	0.52	+0.1
2,968,078	-		IAI47_14040	0.52	-0.3
2,968,078	-		IAI47_14040	0.52	+1.6
2,968,078	-		IAI47_14040	0.52	-1.2
2,968,086	+		IAI47_14040	0.52	+0.2
2,968,086	+		IAI47_14040	0.52	-0.6
2,968,088	+		IAI47_14040	0.52	-1.4
2,968,089	-		IAI47_14040	0.52	+0.8
2,968,089	-		IAI47_14040	0.52	+0.6
2,968,112	+		IAI47_14040	0.54	-1.6
2,968,112	+		IAI47_14040	0.54	-0.6
2,968,112	+		IAI47_14040	0.54	-0.2
2,968,113	-		IAI47_14040	0.54	+0.8
2,968,113	-		IAI47_14040	0.54	-0.5
2,968,113	-		IAI47_14040	0.54	+1.4
2,968,113	-		IAI47_14040	0.54	-0.1
2,968,113	-		IAI47_14040	0.54	+1.4
2,968,115	+		IAI47_14040	0.55	-0.6
2,968,116	-		IAI47_14040	0.55	-0.0
2,968,133	+		IAI47_14040	0.56	-0.0
2,968,134	-		IAI47_14040	0.56	+0.4
2,968,134	-		IAI47_14040	0.56	+0.4
2,968,152	-		IAI47_14040	0.58	+0.4
2,968,187	+		IAI47_14040	0.61	+0.7
2,968,187	+		IAI47_14040	0.61	+1.4
2,968,187	+		IAI47_14040	0.61	+0.1
2,968,187	+		IAI47_14040	0.61	+0.6
2,968,187	+		IAI47_14040	0.61	+1.9
2,968,187	+		IAI47_14040	0.61	-0.6
2,968,187	+		IAI47_14040	0.61	-0.2
2,968,188	-		IAI47_14040	0.61	-0.6
2,968,188	-		IAI47_14040	0.61	-1.2
2,968,188	-		IAI47_14040	0.61	-1.2
2,968,188	-		IAI47_14040	0.61	+1.0
2,968,188	-		IAI47_14040	0.61	+0.5
2,968,189	-		IAI47_14040	0.61	+0.6
2,968,190	+		IAI47_14040	0.61	+1.1
2,968,190	+		IAI47_14040	0.61	+0.1
2,968,190	+		IAI47_14040	0.61	+0.8
2,968,190	+		IAI47_14040	0.61	-0.3
2,968,190	+		IAI47_14040	0.61	+0.5
2,968,190	+		IAI47_14040	0.61	-0.6
2,968,191	-		IAI47_14040	0.61	+0.2
2,968,191	-		IAI47_14040	0.61	-1.2
2,968,191	-		IAI47_14040	0.61	+0.4
2,968,191	-		IAI47_14040	0.61	+0.4
2,968,191	-		IAI47_14040	0.61	-0.3
2,968,203	+		IAI47_14040	0.62	-0.3
2,968,268	+		IAI47_14040	0.67	+0.1
2,968,268	+		IAI47_14040	0.67	-1.6
2,968,268	+		IAI47_14040	0.67	-2.8
2,968,268	+		IAI47_14040	0.67	-0.6
2,968,268	+		IAI47_14040	0.67	-1.3
2,968,268	+		IAI47_14040	0.67	-0.6
2,968,268	+		IAI47_14040	0.67	-1.2
2,968,268	+		IAI47_14040	0.67	-0.6
2,968,268	+		IAI47_14040	0.67	-2.0
2,968,269	-		IAI47_14040	0.67	-2.4
2,968,269	-		IAI47_14040	0.67	-0.9
2,968,269	-		IAI47_14040	0.67	+0.9
2,968,269	-		IAI47_14040	0.67	-1.8
2,968,269	-		IAI47_14040	0.67	-0.2
2,968,269	-		IAI47_14040	0.67	-0.0
2,968,269	-		IAI47_14040	0.67	+0.9
2,968,269	-		IAI47_14040	0.67	-1.6
2,968,269	-		IAI47_14040	0.67	+0.9
2,968,269	-		IAI47_14040	0.67	-0.1
2,968,272	+		IAI47_14040	0.68	+0.4
2,968,272	+		IAI47_14040	0.68	+0.6
2,968,272	+		IAI47_14040	0.68	+1.6
2,968,272	+		IAI47_14040	0.68	+0.2
2,968,273	-		IAI47_14040	0.68	+2.1
2,968,273	-		IAI47_14040	0.68	+1.4
2,968,273	-		IAI47_14040	0.68	+0.2
2,968,273	-		IAI47_14040	0.68	-0.6
2,968,273	-		IAI47_14040	0.68	+0.8
2,968,273	-		IAI47_14040	0.68	+0.6
2,968,273	-		IAI47_14040	0.68	+1.4
2,968,273	-		IAI47_14040	0.68	+1.1
2,968,273	-		IAI47_14040	0.68	-1.1
2,968,273	-		IAI47_14040	0.68	-0.9
2,968,273	-		IAI47_14040	0.68	-1.8
2,968,273	-		IAI47_14040	0.68	-0.6
2,968,275	-		IAI47_14040	0.68	-0.5
2,968,392	-		IAI47_14040	0.77	+0.4
2,968,402	+		IAI47_14040	0.78	+0.7
2,968,402	+		IAI47_14040	0.78	-0.9
2,968,403	-		IAI47_14040	0.78	+0.4
2,968,428	+		IAI47_14040	0.80	+1.9
2,968,428	+		IAI47_14040	0.80	+0.4
2,968,428	+		IAI47_14040	0.80	-0.1
2,968,428	+		IAI47_14040	0.80	-0.2
2,968,428	+		IAI47_14040	0.80	-0.3
2,968,428	+		IAI47_14040	0.80	-0.0
2,968,429	-		IAI47_14040	0.81	-1.6
2,968,429	-		IAI47_14040	0.81	-0.6
2,968,429	-		IAI47_14040	0.81	+0.8
2,968,429	-		IAI47_14040	0.81	-0.4
2,968,451	+		IAI47_14040	0.82	-1.1
2,968,451	+		IAI47_14040	0.82	-0.8
2,968,473	+		IAI47_14040	0.84	+1.3
2,968,473	+		IAI47_14040	0.84	-1.5
2,968,473	+		IAI47_14040	0.84	-0.0
2,968,473	+		IAI47_14040	0.84	+0.6
2,968,473	+		IAI47_14040	0.84	-0.4
2,968,473	+		IAI47_14040	0.84	-0.1
2,968,473	+		IAI47_14040	0.84	-0.5
2,968,473	+		IAI47_14040	0.84	-1.7
2,968,474	-		IAI47_14040	0.84	+0.4
2,968,474	-		IAI47_14040	0.84	-0.5
2,968,474	-		IAI47_14040	0.84	-0.9
2,968,474	-		IAI47_14040	0.84	-0.8
2,968,474	-		IAI47_14040	0.84	+0.8
2,968,474	-		IAI47_14040	0.84	-0.9
2,968,474	-		IAI47_14040	0.84	-0.6
2,968,474	-		IAI47_14040	0.84	+0.2
2,968,488	-		IAI47_14040	0.85	-0.3
2,968,629	+				-2.4
2,968,629	+				-2.3
2,968,629	+				+0.6
2,968,629	+				-0.1
2,968,629	+				-2.0
2,968,629	+				+3.3
2,968,630	-				-0.9
2,968,630	-				+1.2
2,968,630	-				+1.4
2,968,630	-				-1.2
2,968,630	-				-0.2
2,968,668	+				+1.6
2,968,704	+				-0.0
2,968,705	-				+1.1
2,968,711	+				+0.2
2,968,711	+				+1.1
2,968,714	+				-0.1
2,968,714	+				-0.5
2,968,714	+				-0.9
2,968,714	+				-0.5
2,968,714	+				+0.2
2,969,026	+				-2.8
2,969,031	+				-0.1
2,969,032	-				+2.9
2,969,079	+				-0.2
2,969,085	+				+0.8
2,969,738	+				+0.7
2,969,741	-				-0.6
2,969,741	-				+1.1
2,969,759	+				+1.6
2,969,759	+				+1.1
2,969,759	+				-1.3
2,969,759	+				-0.6
2,969,759	+				-0.6
2,969,760	-				+0.8
2,969,760	-				-0.1
2,969,760	-				-1.1
2,969,760	-				+0.6
2,969,790	+				+2.7
2,969,790	+				-0.6
2,969,790	+				-2.5
2,969,791	-				+0.2
2,969,791	-				+2.4
2,969,791	-				-0.4
2,969,791	-				+1.8
2,969,791	-				+0.5
2,969,794	+				+1.3
2,969,794	+				-0.2
2,969,794	+				+0.5
2,969,794	+				+0.6
2,969,794	+				+0.8
2,969,794	+				+0.0
2,969,799	+				+0.3
2,969,800	-				-0.6
2,969,840	+				-1.9
2,969,840	+				-0.9
2,969,937	+				-1.6