Strain Fitness in Pantoea sp. MT58 around IAI47_13640

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
2,892,668	-		IAI47_13635	0.39	+0.8
2,892,668	-		IAI47_13635	0.39	+0.3
2,892,769	+		IAI47_13635	0.48	+2.7
2,892,841	-		IAI47_13635	0.55	+0.9
2,892,848	+		IAI47_13635	0.56	+1.1
2,892,848	+		IAI47_13635	0.56	+2.4
2,892,848	+		IAI47_13635	0.56	+0.8
2,892,849	-		IAI47_13635	0.56	-0.6
2,892,849	-		IAI47_13635	0.56	-0.2
2,892,896	+		IAI47_13635	0.60	-1.7
2,892,896	+		IAI47_13635	0.60	-0.4
2,892,897	-		IAI47_13635	0.60	-1.7
2,892,897	-		IAI47_13635	0.60	-0.7
2,892,897	-		IAI47_13635	0.60	-0.3
2,892,897	-		IAI47_13635	0.60	+2.7
2,892,904	+		IAI47_13635	0.61	+1.4
2,892,904	+		IAI47_13635	0.61	-0.3
2,892,904	+		IAI47_13635	0.61	-0.5
2,892,904	+		IAI47_13635	0.61	-1.8
2,892,905	-		IAI47_13635	0.61	+0.9
2,892,905	-		IAI47_13635	0.61	-0.3
2,892,905	-		IAI47_13635	0.61	+0.8
2,892,905	-		IAI47_13635	0.61	+0.3
2,892,947	+		IAI47_13635	0.65	+0.7
2,892,948	-		IAI47_13635	0.65	-0.1
2,893,050	-		IAI47_13635	0.75	-2.0
2,893,050	-		IAI47_13635	0.75	-0.5
2,893,056	+		IAI47_13635	0.75	+0.6
2,893,056	+		IAI47_13635	0.75	-0.7
2,893,056	+		IAI47_13635	0.75	+0.9
2,893,056	+		IAI47_13635	0.75	+0.1
2,893,057	-		IAI47_13635	0.75	-0.3
2,893,174	+		IAI47_13635	0.86	-0.7
2,893,174	+		IAI47_13635	0.86	+0.2
2,893,175	-		IAI47_13635	0.86	-1.1
2,893,175	-		IAI47_13635	0.86	-0.7
2,893,175	-		IAI47_13635	0.86	-0.7
2,893,175	-		IAI47_13635	0.86	+0.8
2,893,175	-		IAI47_13635	0.86	+0.1
2,893,177	+		IAI47_13635	0.87	-0.2
2,893,177	+		IAI47_13635	0.87	+0.8
2,893,177	+		IAI47_13635	0.87	-1.5
2,893,177	+		IAI47_13635	0.87	-0.7
2,893,178	-		IAI47_13635	0.87	-0.4
2,893,178	-		IAI47_13635	0.87	-0.5
2,893,234	+				+0.8
2,893,286	-				-0.1
2,893,286	-				+1.7
2,893,312	-				-0.5
2,893,312	-				+0.0
2,893,401	-				+1.1
2,893,628	+		IAI47_13640	0.34	+0.2
2,893,696	+		IAI47_13640	0.46	-0.7
2,893,810	+		IAI47_13640	0.67	+1.3
2,893,810	+		IAI47_13640	0.67	-1.2
2,893,810	+		IAI47_13640	0.67	-1.4
2,893,810	+		IAI47_13640	0.67	-0.7
2,893,810	+		IAI47_13640	0.67	+1.2
2,893,811	-		IAI47_13640	0.67	+0.9
2,893,811	-		IAI47_13640	0.67	+1.9
2,893,811	-		IAI47_13640	0.67	+0.2
2,893,964	+				+0.2
2,893,965	-				+1.3
2,893,965	-				+3.0
2,893,965	-				-2.8
2,893,965	-				+0.6
2,893,968	+				+0.7
2,893,968	+				-0.5
2,893,968	+				+0.9
2,893,968	+				-0.7
2,893,968	+				+0.2
2,893,968	+				+0.3
2,893,968	+				+0.3
2,893,968	+				-1.1
2,893,968	+				-2.2
2,893,969	-				-0.2
2,893,969	-				+0.3
2,893,969	-				+0.9
2,893,969	-				-0.7
2,893,969	-				+1.1
2,893,969	-				+0.3
2,893,969	-				+0.6
2,893,981	+				-1.1
2,893,981	+				-1.8
2,893,981	+				+1.1
2,893,982	-				-0.7
2,893,982	-				+0.8
2,893,982	-				+1.6
2,893,982	-				-0.4
2,893,982	-				-0.7
2,893,982	-				-0.1
2,893,984	+				+0.5
2,893,984	+				+0.3
2,893,984	+				-0.7
2,893,984	+				-0.9
2,893,984	+				-0.2
2,893,984	+				-1.5
2,893,984	+				+0.7
2,893,984	+				-1.9
2,893,984	+				-1.5
2,893,984	+				+0.8
2,893,985	-				-0.2
2,893,985	-				+0.1
2,893,985	-				+0.2
2,893,985	-				+0.2
2,893,985	-				-2.2
2,893,991	+				+2.3
2,893,991	+				+0.1
2,893,991	+				+0.3
2,893,991	+				-0.3
2,893,992	-				+0.3
2,893,992	-				-0.1
2,893,992	-				+0.8
2,894,065	+				+2.6
2,894,065	+				-0.7
2,894,065	+				-0.9
2,894,065	+				+0.8
2,894,065	+				+0.9
2,894,067	+				-0.7
2,894,067	+				+1.2
2,894,068	-				-1.3
2,894,117	+				-0.3
2,894,117	+				-0.9
2,894,117	+				+0.7
2,894,117	+				+1.1
2,894,118	-				-0.9
2,894,128	+				-0.2
2,894,128	+				+1.7
2,894,129	-				+1.8
2,894,129	-				-0.1
2,894,129	-				-0.5
2,894,132	+				+0.9
2,894,169	-				+0.3
2,894,236	+				-0.7
2,894,240	+				+1.6
2,894,240	+				+0.6
2,894,240	+				+0.6
2,894,240	+				+0.9
2,894,240	+				+0.0
2,894,240	+				+1.1
2,894,240	+				+3.3
2,894,240	+				-0.1
2,894,240	+				-0.8
2,894,240	+				+0.0
2,894,241	-				+0.3
2,894,241	-				+0.5
2,894,241	-				-1.8
2,894,241	-				-0.5
2,894,241	-				+0.2
2,894,241	-				+0.7
2,894,241	-				-0.2
2,894,241	-				+1.3
2,894,241	-				+0.0
2,894,241	-				-0.8
2,894,241	-				+0.1
2,894,241	-				+0.3
2,894,241	-				+0.6
2,894,241	-				-0.2
2,894,241	-				+0.1
2,894,241	-				+0.3
2,894,503	+		IAI47_13645	0.24	+0.3
2,894,615	+		IAI47_13645	0.32	+0.0
2,894,615	+		IAI47_13645	0.32	-0.7
2,894,647	+		IAI47_13645	0.34	+0.9
2,894,647	+		IAI47_13645	0.34	-0.4
2,894,648	-		IAI47_13645	0.34	+0.1
2,894,648	-		IAI47_13645	0.34	+0.9
2,894,648	-		IAI47_13645	0.34	+0.5
2,894,648	-		IAI47_13645	0.34	-0.1
2,894,756	+		IAI47_13645	0.41	+0.3
2,894,768	+		IAI47_13645	0.42	+0.5