Strain Fitness in Pantoea sp. MT58 around IAI47_12080

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
2,556,396	-				+0.3
2,556,396	-				+0.7
2,556,430	-				-1.3
2,556,430	-				-0.7
2,558,319	-				-1.1
2,558,322	-				+1.3
2,558,322	-				+0.3
2,558,322	-				-1.0
2,558,322	-				+0.6
2,558,561	-		IAI47_12085	0.25	+0.3
2,558,705	-		IAI47_12085	0.39	-0.2
2,558,705	-		IAI47_12085	0.39	-0.7
2,558,705	-		IAI47_12085	0.39	+0.3
2,558,705	-		IAI47_12085	0.39	-1.1
2,558,705	-		IAI47_12085	0.39	-3.1
2,558,705	-		IAI47_12085	0.39	+0.3
2,558,705	-		IAI47_12085	0.39	-2.2
2,558,707	-		IAI47_12085	0.39	-2.3
2,558,707	-		IAI47_12085	0.39	+0.3
2,558,707	-		IAI47_12085	0.39	-1.5
2,558,707	-		IAI47_12085	0.39	-0.9
2,558,707	-		IAI47_12085	0.39	-0.3
2,558,733	-		IAI47_12085	0.42	-1.3
2,558,736	-		IAI47_12085	0.42	-2.4
2,558,736	-		IAI47_12085	0.42	-1.7
2,558,736	-		IAI47_12085	0.42	+0.3
2,558,736	-		IAI47_12085	0.42	-2.1
2,558,736	-		IAI47_12085	0.42	-1.3
2,558,736	-		IAI47_12085	0.42	-3.2
2,558,736	-		IAI47_12085	0.42	-2.3
2,558,768	-		IAI47_12085	0.45	-2.1
2,558,768	-		IAI47_12085	0.45	-1.3
2,558,786	-		IAI47_12085	0.47	-1.3
2,558,786	-		IAI47_12085	0.47	-1.7
2,558,816	-		IAI47_12085	0.50	-1.3
2,558,816	-		IAI47_12085	0.50	-1.7
2,558,907	-		IAI47_12085	0.59	-1.3
2,558,918	-		IAI47_12085	0.60	+0.3
2,558,918	-		IAI47_12085	0.60	+0.7
2,558,937	-		IAI47_12085	0.61	-2.3
2,558,985	-		IAI47_12085	0.66	-0.7
2,558,997	-		IAI47_12085	0.67	-0.2
2,559,017	-		IAI47_12085	0.69	-2.1
2,559,032	-		IAI47_12085	0.71	-0.5