Strain Fitness in Pantoea sp. MT58 around IAI47_07480

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,578,270	+				+1.1
1,578,270	+				-0.9
1,578,270	+				+0.7
1,578,270	+				-0.8
1,578,270	+				+2.6
1,578,270	+				-0.6
1,578,270	+				-1.3
1,578,271	-				-1.2
1,578,271	-				-0.1
1,578,271	-				+2.9
1,578,274	+				+0.2
1,578,276	+				-1.0
1,578,276	+				-2.1
1,578,277	-				+1.2
1,578,277	-				+0.2
1,578,277	-				+0.6
1,578,280	+				-0.5
1,578,280	+				-0.2
1,578,280	+				-0.1
1,578,280	+				+1.2
1,578,280	+				+0.4
1,578,281	-				+0.5
1,578,281	-				-1.8
1,578,281	-				+1.4
1,578,281	-				+0.1
1,578,281	-				+0.6
1,578,288	+				-0.1
1,578,289	-				-0.2
1,578,335	-				-2.3
1,578,391	+				+1.1
1,578,470	+				+1.6
1,578,471	-				-0.7
1,578,471	-				-0.5
1,578,477	-				-0.1
1,578,477	-				-0.1
1,578,501	-				+0.2
1,578,505	-				+0.7
1,578,505	-				+1.5
1,578,505	-				-0.3
1,578,579	+		IAI47_07470	0.34	+1.1
1,578,590	+		IAI47_07470	0.39	+0.2
1,578,593	-		IAI47_07470	0.40	-0.8
1,578,630	-		IAI47_07470	0.57	+0.1
1,578,693	+		IAI47_07470	0.86	+1.5
1,578,721	+				+0.2
1,578,744	+				+0.2
1,578,852	-		IAI47_07475	0.34	-0.3
1,578,957	+		IAI47_07475	0.68	-0.2
1,579,078	-				-0.2
1,579,176	-				+2.0
1,579,197	+				-0.1
1,579,235	-		IAI47_07480	0.14	-0.6
1,579,235	-		IAI47_07480	0.14	+0.1
1,579,296	+		IAI47_07480	0.35	-0.9
1,579,325	-		IAI47_07480	0.45	+2.6
1,579,447	-		IAI47_07480	0.86	+1.9
1,579,460	+				-0.8
1,579,499	+				+0.7
1,579,499	+				+0.0
1,579,500	-				+0.2
1,579,524	-				+1.5
1,579,560	-				+2.6
1,579,603	-				+0.8
1,579,603	-				+0.5
1,579,660	+		IAI47_07485	0.15	-0.3
1,579,660	+		IAI47_07485	0.15	+0.8
1,579,661	-		IAI47_07485	0.16	+1.1
1,579,666	+		IAI47_07485	0.17	+0.3
1,579,737	-		IAI47_07485	0.35	+1.1
1,579,741	+		IAI47_07485	0.36	+1.3
1,579,741	+		IAI47_07485	0.36	-0.5
1,579,742	-		IAI47_07485	0.36	-1.3
1,579,742	-		IAI47_07485	0.36	+0.1
1,579,867	+		IAI47_07485	0.69	-0.7
1,579,868	-		IAI47_07485	0.69	-1.1
1,579,917	+		IAI47_07485	0.82	-2.3
1,579,990	-				+0.5
1,580,074	-				-1.6
1,580,257	-		IAI47_07490	0.24	+0.7
1,580,302	-		IAI47_07490	0.31	+0.8
1,580,341	-		IAI47_07490	0.37	-0.7
1,580,481	+		IAI47_07490	0.58	-0.1
1,580,485	+		IAI47_07490	0.59	-1.3