Strain Fitness in Pantoea sp. MT58 around IAI47_04850

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,017,240	-		IAI47_04845	0.65	-0.0
1,017,293	+		IAI47_04845	0.69	+0.2
1,017,294	-		IAI47_04845	0.69	+1.2
1,017,323	+		IAI47_04845	0.70	-0.2
1,017,323	+		IAI47_04845	0.70	-0.7
1,017,324	-		IAI47_04845	0.71	-0.2
1,017,324	-		IAI47_04845	0.71	+0.0
1,017,341	+		IAI47_04845	0.72	-0.7
1,017,342	-		IAI47_04845	0.72	-2.0
1,017,455	-		IAI47_04845	0.79	+0.7
1,017,455	-		IAI47_04845	0.79	-1.0
1,017,519	+		IAI47_04845	0.83	+2.3
1,017,519	+		IAI47_04845	0.83	-1.0
1,017,520	-		IAI47_04845	0.83	-0.7
1,017,520	-		IAI47_04845	0.83	+0.5
1,017,520	-		IAI47_04845	0.83	+2.1
1,017,536	+		IAI47_04845	0.84	-0.2
1,017,537	-		IAI47_04845	0.84	+0.8
1,017,545	+		IAI47_04845	0.84	-0.3
1,017,570	+		IAI47_04845	0.86	-0.1
1,017,571	-		IAI47_04845	0.86	+0.3
1,017,571	-		IAI47_04845	0.86	-0.4
1,017,593	+		IAI47_04845	0.87	-0.2
1,017,593	+		IAI47_04845	0.87	+2.5
1,017,593	+		IAI47_04845	0.87	+0.2
1,017,593	+		IAI47_04845	0.87	+1.5
1,017,593	+		IAI47_04845	0.87	-1.7
1,017,594	-		IAI47_04845	0.87	-0.1
1,017,594	-		IAI47_04845	0.87	+0.6
1,017,594	-		IAI47_04845	0.87	+0.3
1,017,594	-		IAI47_04845	0.87	+4.5
1,017,617	+		IAI47_04845	0.89	+1.5
1,017,618	-		IAI47_04845	0.89	+0.0
1,017,618	-		IAI47_04845	0.89	+0.3
1,017,644	+				+0.1
1,017,645	-				+1.9
1,017,658	+				-0.9
1,017,658	+				+0.3
1,017,658	+				+0.3
1,017,659	-				-0.9
1,017,659	-				+1.3
1,017,659	-				+0.3
1,017,689	+				+0.3
1,017,689	+				-1.0
1,017,690	-				-0.7
1,017,697	-				+0.3
1,017,697	-				-2.7
1,017,697	-				-0.2
1,017,765	+				-1.0
1,017,765	+				-0.5
1,017,765	+				+0.3
1,017,766	-				+0.9
1,017,766	-				-1.5
1,017,766	-				+0.3
1,017,766	-				+1.3
1,017,766	-				-1.7
1,017,766	-				+0.3
1,017,766	-				-1.1
1,017,768	+				-1.1
1,017,769	-				+0.0
1,017,769	-				+1.7
1,017,769	-				+0.2
1,017,769	-				-0.7
1,017,769	-				-0.1
1,017,781	+				+0.3
1,017,782	-				-0.2
1,017,782	-				-0.7
1,017,841	-				+1.9
1,017,888	+				+0.9
1,017,913	+				+1.3
1,017,914	-				-0.7
1,017,917	+				-0.7
1,017,918	-				+1.1
1,017,918	-				+0.9
1,017,961	+				-0.4
1,017,972	+				-0.4
1,017,982	-				-0.1
1,017,990	+				+0.6
1,017,990	+				-0.5
1,017,991	-				-1.4
1,018,013	+				-0.2
1,018,013	+				-0.8
1,018,013	+				+0.0
1,018,013	+				-0.1
1,018,013	+				+0.6
1,018,018	+				+1.6
1,018,018	+				+0.0
1,018,034	+				+1.4
1,018,034	+				-0.9
1,018,071	+				-1.1
1,018,071	+				+1.1
1,018,071	+				+0.8
1,018,071	+				+0.3
1,018,089	+				+1.0
1,018,093	+				+0.7
1,018,093	+				+0.5
1,018,093	+				-0.6
1,018,093	+				+0.3
1,018,133	+				+0.0
1,018,133	+				+0.9
1,018,133	+				-0.1
1,018,173	+				+2.3
1,018,173	+				-0.3
1,018,173	+				+1.7
1,018,758	+				+0.9
1,018,786	+				-1.7
1,018,792	+				+0.9
1,018,976	+		IAI47_04855	0.24	+0.3
1,019,339	+		IAI47_04855	0.80	-2.0
1,019,359	+		IAI47_04855	0.83	-0.7
1,019,359	+		IAI47_04855	0.83	-0.7
1,019,359	+		IAI47_04855	0.83	+1.7
1,019,359	+		IAI47_04855	0.83	+2.0
1,019,360	-		IAI47_04855	0.83	+0.2
1,019,360	-		IAI47_04855	0.83	+1.5
1,019,360	-		IAI47_04855	0.83	-1.2
1,019,360	-		IAI47_04855	0.83	+0.8
1,019,360	-		IAI47_04855	0.83	+0.1
1,019,360	-		IAI47_04855	0.83	+0.1
1,019,453	+				+0.3
1,019,453	+				-0.5
1,019,453	+				-0.1
1,019,453	+				-2.8
1,019,453	+				-2.2
1,019,454	-				-3.1
1,019,470	+				+1.7
1,019,470	+				-0.2
1,019,471	-				+0.2
1,019,471	-				-0.4
1,019,487	+				+0.3
1,019,487	+				+0.3
1,019,487	+				-0.7
1,019,487	+				+0.3
1,019,487	+				-0.2
1,019,488	-				-0.7
1,019,496	-				+1.7
1,019,518	+				+2.8
1,019,518	+				-0.7
1,019,519	-				-0.7
1,019,519	-				+0.0
1,019,547	-				-1.8
1,019,563	+				-0.5
1,019,563	+				-2.1
1,019,613	+		IAI47_04860	0.15	+0.1
1,019,613	+		IAI47_04860	0.15	-0.2
1,019,613	+		IAI47_04860	0.15	+0.9
1,019,613	+		IAI47_04860	0.15	+0.3
1,019,614	-		IAI47_04860	0.15	+0.6
1,019,615	+		IAI47_04860	0.15	-0.7
1,019,615	+		IAI47_04860	0.15	+1.5
1,019,615	+		IAI47_04860	0.15	+0.3
1,019,615	+		IAI47_04860	0.15	-0.1
1,019,616	-		IAI47_04860	0.15	-0.3
1,019,616	-		IAI47_04860	0.15	-0.2
1,019,616	-		IAI47_04860	0.15	-0.1
1,019,695	+		IAI47_04860	0.23	+3.1
1,019,695	+		IAI47_04860	0.23	+0.1
1,019,696	-		IAI47_04860	0.23	+0.6
1,019,723	+		IAI47_04860	0.26	-0.7
1,019,748	+		IAI47_04860	0.29	-1.7
1,019,749	-		IAI47_04860	0.29	+0.3
1,019,749	-		IAI47_04860	0.29	-1.1
1,019,749	-		IAI47_04860	0.29	+0.6
1,019,749	-		IAI47_04860	0.29	-1.0