Strain Fitness in Pantoea sp. MT58 around IAI47_00375

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
81,458	+				-0.4
81,458	+				-0.1
81,458	+				+0.7
81,458	+				+0.3
81,458	+				+0.9
81,459	-				-1.8
81,459	-				+0.3
81,474	-				-1.3
81,482	-				+0.3
81,532	-				-3.5
81,532	-				-2.8
81,580	+		IAI47_00370	0.11	+0.3
81,580	+		IAI47_00370	0.11	-0.1
81,581	-		IAI47_00370	0.11	-2.8
81,581	-		IAI47_00370	0.11	+0.3
81,601	-		IAI47_00370	0.14	-2.3
81,654	+		IAI47_00370	0.19	+0.6
81,654	+		IAI47_00370	0.19	+0.7
81,655	-		IAI47_00370	0.19	-4.9
81,655	-		IAI47_00370	0.19	-1.3
81,655	-		IAI47_00370	0.19	-2.0
81,656	-		IAI47_00370	0.19	-4.1
81,684	+		IAI47_00370	0.22	-1.7
81,690	+		IAI47_00370	0.23	+1.0
81,690	+		IAI47_00370	0.23	+0.7
81,691	-		IAI47_00370	0.23	-2.7
81,705	+		IAI47_00370	0.25	+0.5
81,706	-		IAI47_00370	0.25	-2.7
81,706	-		IAI47_00370	0.25	-0.3
81,706	-		IAI47_00370	0.25	-0.7
81,706	-		IAI47_00370	0.25	-3.0
81,706	-		IAI47_00370	0.25	-3.4
81,717	+		IAI47_00370	0.26	-0.7
81,717	+		IAI47_00370	0.26	-0.6
81,717	+		IAI47_00370	0.26	-1.5
81,717	+		IAI47_00370	0.26	-1.8
81,717	+		IAI47_00370	0.26	-1.8
81,717	+		IAI47_00370	0.26	-1.3
81,717	+		IAI47_00370	0.26	-0.7
81,717	+		IAI47_00370	0.26	-0.4
81,717	+		IAI47_00370	0.26	+3.5
81,718	-		IAI47_00370	0.26	-3.0
81,718	-		IAI47_00370	0.26	-2.7
81,718	-		IAI47_00370	0.26	-3.5
81,718	-		IAI47_00370	0.26	-3.1
81,718	-		IAI47_00370	0.26	-2.5
81,718	-		IAI47_00370	0.26	-3.0
81,718	-		IAI47_00370	0.26	-1.4
81,718	-		IAI47_00370	0.26	-2.5
81,718	-		IAI47_00370	0.26	-3.3
81,723	+		IAI47_00370	0.27	-0.7
81,723	+		IAI47_00370	0.27	+0.3
81,723	+		IAI47_00370	0.27	-0.3
81,723	+		IAI47_00370	0.27	-0.0
81,811	+		IAI47_00370	0.36	+1.3
81,811	+		IAI47_00370	0.36	-1.3
81,811	+		IAI47_00370	0.36	+1.3
81,812	-		IAI47_00370	0.36	-1.2
81,812	-		IAI47_00370	0.36	-2.5
81,812	-		IAI47_00370	0.36	-0.7
81,812	-		IAI47_00370	0.36	-2.8
81,833	+		IAI47_00370	0.38	-0.4
81,887	+		IAI47_00370	0.44	+0.6
81,887	+		IAI47_00370	0.44	+1.7
81,888	-		IAI47_00370	0.44	-0.6
81,888	-		IAI47_00370	0.44	-4.9
81,888	-		IAI47_00370	0.44	-4.7
81,888	-		IAI47_00370	0.44	-2.7
81,888	-		IAI47_00370	0.44	-3.8
81,888	-		IAI47_00370	0.44	-1.7
81,890	+		IAI47_00370	0.45	+0.2
81,890	+		IAI47_00370	0.45	-1.7
81,890	+		IAI47_00370	0.45	-1.3
81,890	+		IAI47_00370	0.45	-1.8
81,890	+		IAI47_00370	0.45	-1.5
81,890	+		IAI47_00370	0.45	-0.4
81,890	+		IAI47_00370	0.45	+1.8
81,890	+		IAI47_00370	0.45	+1.9
81,891	-		IAI47_00370	0.45	-3.3
81,891	-		IAI47_00370	0.45	-2.3
81,891	-		IAI47_00370	0.45	-2.8
81,891	-		IAI47_00370	0.45	-2.6
81,891	-		IAI47_00370	0.45	-1.7
81,891	-		IAI47_00370	0.45	-2.8
81,891	-		IAI47_00370	0.45	-2.8
81,920	+		IAI47_00370	0.48	-0.9
81,921	-		IAI47_00370	0.48	-1.7
81,921	-		IAI47_00370	0.48	-1.3
81,954	+		IAI47_00370	0.52	-1.3
81,954	+		IAI47_00370	0.52	+0.5
81,954	+		IAI47_00370	0.52	+0.1
81,954	+		IAI47_00370	0.52	+0.1
81,954	+		IAI47_00370	0.52	-0.9
81,954	+		IAI47_00370	0.52	+0.7
81,955	-		IAI47_00370	0.52	-3.5
81,955	-		IAI47_00370	0.52	-2.3
81,955	-		IAI47_00370	0.52	-3.3
81,955	-		IAI47_00370	0.52	+0.3
81,955	-		IAI47_00370	0.52	-2.5
81,955	-		IAI47_00370	0.52	-3.3
81,985	-		IAI47_00370	0.55	-3.0
82,013	+		IAI47_00370	0.58	+0.3
82,021	-		IAI47_00370	0.59	-3.8
82,023	+		IAI47_00370	0.59	-1.0
82,023	+		IAI47_00370	0.59	+1.0
82,023	+		IAI47_00370	0.59	-0.3
82,023	+		IAI47_00370	0.59	-2.3
82,024	-		IAI47_00370	0.59	-0.7
82,024	-		IAI47_00370	0.59	-2.0
82,024	-		IAI47_00370	0.59	-1.7
82,026	+		IAI47_00370	0.59	-1.6
82,027	-		IAI47_00370	0.59	+0.6
82,027	-		IAI47_00370	0.59	-2.7
82,027	-		IAI47_00370	0.59	-1.3
82,140	+		IAI47_00370	0.72	-0.7
82,141	-		IAI47_00370	0.72	-1.3
82,141	-		IAI47_00370	0.72	-1.0
82,141	-		IAI47_00370	0.72	-2.7
82,191	+		IAI47_00370	0.77	+0.9
82,191	+		IAI47_00370	0.77	-1.0
82,191	+		IAI47_00370	0.77	-0.3
82,191	+		IAI47_00370	0.77	-0.7
82,191	+		IAI47_00370	0.77	+0.3
82,191	+		IAI47_00370	0.77	+0.1
82,192	-		IAI47_00370	0.77	-2.8
82,192	-		IAI47_00370	0.77	-2.0
82,192	-		IAI47_00370	0.77	-3.4
82,210	-		IAI47_00370	0.79	-2.1
82,215	+		IAI47_00370	0.80	+0.0
82,215	+		IAI47_00370	0.80	+0.0
82,216	-		IAI47_00370	0.80	+0.5
82,216	-		IAI47_00370	0.80	-2.7
82,257	+		IAI47_00370	0.84	-1.3
82,257	+		IAI47_00370	0.84	-0.8
82,257	+		IAI47_00370	0.84	-0.8
82,257	+		IAI47_00370	0.84	-0.2
82,258	-		IAI47_00370	0.84	-2.3
82,258	-		IAI47_00370	0.84	-3.4
82,258	-		IAI47_00370	0.84	-3.3
82,258	-		IAI47_00370	0.84	-3.5
82,261	-		IAI47_00370	0.85	-2.0
82,288	+		IAI47_00370	0.87	+0.7
82,288	+		IAI47_00370	0.87	+0.8
82,288	+		IAI47_00370	0.87	-2.0
82,289	-		IAI47_00370	0.88	-1.3
82,289	-		IAI47_00370	0.88	-2.8
82,289	-		IAI47_00370	0.88	-2.1
82,289	-		IAI47_00370	0.88	-3.8
82,289	-		IAI47_00370	0.88	-1.7
82,402	+				-0.7
82,402	+				-2.0
82,403	-				-1.9
82,450	+				-1.7
82,450	+				-2.9
82,450	+				-2.6
82,451	-				-1.8
82,451	-				-3.1
82,451	-				-2.0
82,477	+				-4.2
82,477	+				-4.4
82,478	-				-1.7
82,478	-				-3.8
82,527	+		IAI47_00375	0.11	-3.9
82,528	-		IAI47_00375	0.11	-4.1
82,528	-		IAI47_00375	0.11	-3.5
82,541	+		IAI47_00375	0.12	-3.8
82,541	+		IAI47_00375	0.12	-2.5
82,541	+		IAI47_00375	0.12	-3.9
82,541	+		IAI47_00375	0.12	-1.7
82,541	+		IAI47_00375	0.12	-1.3
82,541	+		IAI47_00375	0.12	-5.4
82,541	+		IAI47_00375	0.12	-1.5
82,541	+		IAI47_00375	0.12	-2.3
82,541	+		IAI47_00375	0.12	-2.3
82,541	+		IAI47_00375	0.12	-2.5
82,542	-		IAI47_00375	0.13	-0.7
82,542	-		IAI47_00375	0.13	-2.7
82,542	-		IAI47_00375	0.13	-3.7
82,542	-		IAI47_00375	0.13	-1.3
82,542	-		IAI47_00375	0.13	-1.7
82,542	-		IAI47_00375	0.13	-2.5
82,542	-		IAI47_00375	0.13	-3.0
82,542	-		IAI47_00375	0.13	-2.8
82,597	+		IAI47_00375	0.18	-3.9
82,597	+		IAI47_00375	0.18	-2.3
82,597	+		IAI47_00375	0.18	-1.3
82,597	+		IAI47_00375	0.18	-0.7
82,597	+		IAI47_00375	0.18	-5.3
82,598	-		IAI47_00375	0.18	-3.1
82,598	-		IAI47_00375	0.18	-4.8
82,615	+		IAI47_00375	0.20	-3.1
82,615	+		IAI47_00375	0.20	-2.7
82,615	+		IAI47_00375	0.20	-2.5
82,615	+		IAI47_00375	0.20	-1.3
82,615	+		IAI47_00375	0.20	-0.7
82,615	+		IAI47_00375	0.20	-2.3
82,615	+		IAI47_00375	0.20	-3.5
82,615	+		IAI47_00375	0.20	-3.7
82,615	+		IAI47_00375	0.20	-3.0
82,616	-		IAI47_00375	0.20	-3.0
82,616	-		IAI47_00375	0.20	-2.0
82,616	-		IAI47_00375	0.20	-2.0
82,616	-		IAI47_00375	0.20	-3.6
82,616	-		IAI47_00375	0.20	-2.3
82,616	-		IAI47_00375	0.20	-1.3
82,616	-		IAI47_00375	0.20	-0.7
82,616	-		IAI47_00375	0.20	-2.3
82,616	-		IAI47_00375	0.20	-2.7
82,618	+		IAI47_00375	0.20	-2.7
82,618	+		IAI47_00375	0.20	-2.5
82,618	+		IAI47_00375	0.20	-4.3
82,618	+		IAI47_00375	0.20	-3.4
82,619	-		IAI47_00375	0.20	-2.7
82,628	+		IAI47_00375	0.21	-3.1
82,628	+		IAI47_00375	0.21	-3.5
82,629	-		IAI47_00375	0.21	-2.8
82,664	+		IAI47_00375	0.25	-1.3
82,664	+		IAI47_00375	0.25	-3.3
82,664	+		IAI47_00375	0.25	-2.5
82,664	+		IAI47_00375	0.25	-0.7
82,665	-		IAI47_00375	0.25	-4.3
82,665	-		IAI47_00375	0.25	-2.4
82,665	-		IAI47_00375	0.25	-3.3
82,676	+		IAI47_00375	0.26	-3.3
82,676	+		IAI47_00375	0.26	-3.3
82,676	+		IAI47_00375	0.26	-2.8
82,676	+		IAI47_00375	0.26	-2.7
82,677	-		IAI47_00375	0.26	-3.9
82,677	-		IAI47_00375	0.26	-3.9
82,677	-		IAI47_00375	0.26	+1.3
82,677	-		IAI47_00375	0.26	-2.0
82,678	+		IAI47_00375	0.26	-4.5
82,678	+		IAI47_00375	0.26	-2.3
82,678	+		IAI47_00375	0.26	-3.3
82,678	+		IAI47_00375	0.26	-3.5
82,678	+		IAI47_00375	0.26	-2.3
82,678	+		IAI47_00375	0.26	-3.8
82,678	+		IAI47_00375	0.26	-1.3
82,678	+		IAI47_00375	0.26	-2.0
82,693	+		IAI47_00375	0.28	-1.3
82,694	-		IAI47_00375	0.28	-4.4
82,804	+		IAI47_00375	0.39	-1.3
82,804	+		IAI47_00375	0.39	-3.0
82,804	+		IAI47_00375	0.39	-2.7
82,804	+		IAI47_00375	0.39	-2.9
82,804	+		IAI47_00375	0.39	-4.5
82,805	-		IAI47_00375	0.39	-1.3
82,805	-		IAI47_00375	0.39	-3.3
82,825	+		IAI47_00375	0.41	-3.5
82,825	+		IAI47_00375	0.41	-1.3
82,825	+		IAI47_00375	0.41	-2.5
82,825	+		IAI47_00375	0.41	-2.0
82,825	+		IAI47_00375	0.41	-2.3
82,825	+		IAI47_00375	0.41	-5.2
82,825	+		IAI47_00375	0.41	-2.8
82,825	+		IAI47_00375	0.41	+1.3
82,825	+		IAI47_00375	0.41	-0.7
82,825	+		IAI47_00375	0.41	-1.3
82,826	-		IAI47_00375	0.41	-1.7
82,826	-		IAI47_00375	0.41	-2.4
82,826	-		IAI47_00375	0.41	-2.0
82,826	-		IAI47_00375	0.41	-2.7
82,826	-		IAI47_00375	0.41	-1.7
82,826	-		IAI47_00375	0.41	-0.3
82,826	-		IAI47_00375	0.41	-2.5
82,826	-		IAI47_00375	0.41	-1.3
82,826	-		IAI47_00375	0.41	-2.8
82,826	-		IAI47_00375	0.41	-2.5
82,826	-		IAI47_00375	0.41	-1.7
82,826	-		IAI47_00375	0.41	-2.8
82,826	-		IAI47_00375	0.41	-1.3
82,827	+		IAI47_00375	0.42	-1.7
82,827	+		IAI47_00375	0.42	-1.3
82,827	+		IAI47_00375	0.42	-1.3
82,827	+		IAI47_00375	0.42	-1.5
82,827	+		IAI47_00375	0.42	-4.3
82,827	+		IAI47_00375	0.42	-4.1
82,827	+		IAI47_00375	0.42	-2.8
82,827	+		IAI47_00375	0.42	-2.0
82,828	-		IAI47_00375	0.42	-3.5
82,828	-		IAI47_00375	0.42	-2.8
82,828	-		IAI47_00375	0.42	-1.7
82,828	-		IAI47_00375	0.42	-3.6
82,828	-		IAI47_00375	0.42	-2.4
82,828	-		IAI47_00375	0.42	-4.4
82,828	-		IAI47_00375	0.42	-3.6
82,828	-		IAI47_00375	0.42	-4.0
82,828	-		IAI47_00375	0.42	-1.7
82,828	-		IAI47_00375	0.42	-3.0
82,828	-		IAI47_00375	0.42	-2.3
82,831	+		IAI47_00375	0.42	-0.7
82,831	+		IAI47_00375	0.42	-2.2
82,831	+		IAI47_00375	0.42	-2.0
82,831	+		IAI47_00375	0.42	-2.3
82,831	+		IAI47_00375	0.42	-2.0
82,831	+		IAI47_00375	0.42	-3.8
82,832	-		IAI47_00375	0.42	-0.7
82,832	-		IAI47_00375	0.42	-5.1
82,832	-		IAI47_00375	0.42	-2.2
82,832	-		IAI47_00375	0.42	-2.8
82,832	-		IAI47_00375	0.42	+0.3
82,832	-		IAI47_00375	0.42	-4.7
82,876	+		IAI47_00375	0.47	-4.0
82,876	+		IAI47_00375	0.47	-3.9
82,876	+		IAI47_00375	0.47	-1.7
82,876	+		IAI47_00375	0.47	-2.8
82,877	-		IAI47_00375	0.47	-0.7
82,877	-		IAI47_00375	0.47	-3.3
82,877	-		IAI47_00375	0.47	-3.8
82,912	+		IAI47_00375	0.50	+0.3
82,926	+		IAI47_00375	0.52	-3.0
82,926	+		IAI47_00375	0.52	+0.3
82,926	+		IAI47_00375	0.52	-2.0
82,926	+		IAI47_00375	0.52	-3.1
82,938	-		IAI47_00375	0.53	-2.7
82,938	-		IAI47_00375	0.53	-1.3
82,938	-		IAI47_00375	0.53	-1.7
82,938	-		IAI47_00375	0.53	-5.2
82,939	+		IAI47_00375	0.53	-3.5
82,940	-		IAI47_00375	0.53	+0.1
82,940	-		IAI47_00375	0.53	-2.3
82,940	-		IAI47_00375	0.53	-1.7
82,940	-		IAI47_00375	0.53	-4.6
82,945	+		IAI47_00375	0.54	-2.9
82,945	+		IAI47_00375	0.54	-2.1
82,945	+		IAI47_00375	0.54	-3.5
82,945	+		IAI47_00375	0.54	-3.4
82,945	+		IAI47_00375	0.54	-2.1
82,946	-		IAI47_00375	0.54	-3.0
82,946	-		IAI47_00375	0.54	-2.3
82,947	+		IAI47_00375	0.54	-2.0
82,947	+		IAI47_00375	0.54	-3.0
82,947	+		IAI47_00375	0.54	-3.3
82,947	+		IAI47_00375	0.54	-1.4
82,947	+		IAI47_00375	0.54	+0.9
82,948	-		IAI47_00375	0.54	-2.9
82,948	-		IAI47_00375	0.54	-0.9
82,948	-		IAI47_00375	0.54	-3.0
82,972	+		IAI47_00375	0.56	-1.3
82,972	+		IAI47_00375	0.56	-2.7
82,972	+		IAI47_00375	0.56	-0.6
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