Strain Fitness in Pantoea sp. MT58 around IAI47_05075

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,071,369	+				-0.8
1,071,369	+				-0.6
1,071,369	+				+0.8
1,071,370	-				-1.6
1,071,404	+				+3.0
1,071,404	+				+0.2
1,071,404	+				+0.4
1,071,405	-				-0.0
1,071,405	-				-2.4
1,071,405	-				+0.1
1,071,405	-				+3.0
1,071,418	+				+2.7
1,071,418	+				+2.1
1,071,418	+				+1.0
1,071,430	+				-0.5
1,071,446	+				+2.2
1,071,448	+				-0.1
1,072,975	+				-0.9
1,073,103	+		IAI47_05080	0.25	-1.9
1,073,128	+		IAI47_05080	0.36	-0.9
1,073,129	-		IAI47_05080	0.37	+0.6
1,073,174	+		IAI47_05080	0.57	-0.1
1,073,200	+		IAI47_05080	0.69	-1.8
1,073,200	+		IAI47_05080	0.69	+0.4
1,073,243	+		IAI47_05080	0.88	-0.9
1,073,243	+		IAI47_05080	0.88	+0.1
1,073,243	+		IAI47_05080	0.88	+0.5
1,073,244	-		IAI47_05080	0.89	+2.4
1,073,244	-		IAI47_05080	0.89	-0.5
1,073,244	-		IAI47_05080	0.89	-1.9
1,073,266	+				-1.2
1,073,282	+				+1.5
1,073,282	+				+0.4
1,073,283	-				+0.8
1,073,283	-				-0.6
1,073,288	+				-0.6
1,073,288	+				+0.7
1,073,288	+				+2.2
1,073,289	-				-0.6
1,073,289	-				+0.2
1,073,289	-				-0.6
1,073,349	+				+0.4
1,073,365	+				-2.9
1,073,365	+				-0.2
1,073,366	-				-0.3
1,073,366	-				-1.1
1,073,366	-				-0.3
1,073,366	-				-0.6
1,073,366	-				-0.0
1,073,394	-				+3.2
1,073,394	-				+0.1
1,073,474	+				+0.9
1,073,474	+				-0.1
1,073,474	+				-0.6
1,073,474	+				+0.5
1,073,474	+				-0.6
1,073,474	+				-0.2
1,073,476	+				+1.9
1,073,477	-				+0.3
1,073,540	+				-0.0
1,073,540	+				+0.0
1,073,540	+				-0.6
1,073,540	+				+0.8
1,073,540	+				-1.4
1,073,540	+				-0.8
1,073,540	+				+1.8
1,073,540	+				+0.6
1,073,541	-				-0.4
1,073,541	-				+1.0
1,073,541	-				-0.8
1,073,541	-				+0.8
1,073,541	-				+0.5
1,073,541	-				-2.2
1,073,559	+				+1.4
1,073,559	+				-1.3
1,073,571	+				-0.5
1,073,571	+				+0.7
1,073,571	+				-0.0
1,073,571	+				+0.5
1,073,572	-				+0.6
1,073,572	-				-0.0
1,073,578	+				-0.2
1,073,578	+				-0.9
1,073,579	-				-0.6
1,073,711	+				+0.5
1,073,728	+				+0.8
1,073,729	-				-0.2
1,073,734	+				+3.0
1,073,734	+				+0.7
1,073,734	+				+1.7
1,073,734	+				+0.1
1,073,735	-				+0.2
1,073,735	-				-0.4
1,073,735	-				+0.6
1,073,735	-				+0.4
1,073,923	+		IAI47_05085	0.14	+1.1
1,073,924	-		IAI47_05085	0.14	-0.4
1,073,924	-		IAI47_05085	0.14	+0.4
1,073,924	-		IAI47_05085	0.14	-0.3
1,073,936	-		IAI47_05085	0.15	+0.4
1,073,936	-		IAI47_05085	0.15	+1.1
1,073,960	+		IAI47_05085	0.16	-1.2
1,073,961	-		IAI47_05085	0.16	-0.4