Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08185 and AZOBR_RS08190 are separated by 39 nucleotides AZOBR_RS08190 and AZOBR_RS08195 are separated by 229 nucleotides
AZOBR_RS08185: AZOBR_RS08185 - PhoU family transcriptional regulator, at 1,725,042 to 1,725,752
_RS08185
AZOBR_RS08190: AZOBR_RS08190 - putative conserved cation transport regulator, at 1,725,792 to 1,726,016
_RS08190
AZOBR_RS08195: AZOBR_RS08195 - hypothetical protein, at 1,726,246 to 1,726,488
_RS08195
Position (kb)
1726
1727 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1725.465 kb on + strand, within AZOBR_RS08185 at 1725.466 kb on - strand, within AZOBR_RS08185 at 1725.531 kb on + strand, within AZOBR_RS08185 at 1725.531 kb on + strand, within AZOBR_RS08185 at 1725.532 kb on - strand, within AZOBR_RS08185 at 1725.561 kb on + strand, within AZOBR_RS08185 at 1725.561 kb on + strand, within AZOBR_RS08185 at 1725.561 kb on + strand, within AZOBR_RS08185 at 1725.562 kb on - strand, within AZOBR_RS08185 at 1725.562 kb on - strand, within AZOBR_RS08185 at 1725.672 kb on + strand, within AZOBR_RS08185 at 1725.672 kb on + strand, within AZOBR_RS08185 at 1725.673 kb on - strand, within AZOBR_RS08185 at 1725.673 kb on - strand, within AZOBR_RS08185 at 1725.673 kb on - strand, within AZOBR_RS08185 at 1725.673 kb on - strand, within AZOBR_RS08185 at 1725.729 kb on + strand at 1725.729 kb on + strand at 1725.729 kb on + strand at 1725.730 kb on - strand at 1725.750 kb on + strand at 1725.750 kb on + strand at 1725.751 kb on - strand at 1725.830 kb on - strand, within AZOBR_RS08190 at 1725.860 kb on + strand, within AZOBR_RS08190 at 1725.861 kb on - strand, within AZOBR_RS08190 at 1725.861 kb on - strand, within AZOBR_RS08190 at 1726.034 kb on + strand at 1726.035 kb on - strand at 1726.054 kb on + strand at 1726.057 kb on + strand at 1726.057 kb on + strand at 1726.057 kb on + strand at 1726.057 kb on + strand at 1726.058 kb on - strand at 1726.058 kb on - strand at 1726.058 kb on - strand at 1726.111 kb on - strand at 1726.239 kb on - strand at 1726.909 kb on + strand at 1727.064 kb on + strand at 1727.064 kb on + strand at 1727.064 kb on + strand at 1727.064 kb on + strand at 1727.104 kb on - strand at 1727.273 kb on + strand at 1727.274 kb on - strand at 1727.341 kb on + strand at 1727.341 kb on + strand at 1727.342 kb on - strand at 1727.342 kb on - strand at 1727.375 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 1,725,465 + AZOBR_RS08185 0.59 +0.1 1,725,466 - AZOBR_RS08185 0.60 -1.4 1,725,531 + AZOBR_RS08185 0.69 -0.8 1,725,531 + AZOBR_RS08185 0.69 -0.1 1,725,532 - AZOBR_RS08185 0.69 +0.3 1,725,561 + AZOBR_RS08185 0.73 +0.4 1,725,561 + AZOBR_RS08185 0.73 +0.3 1,725,561 + AZOBR_RS08185 0.73 +0.2 1,725,562 - AZOBR_RS08185 0.73 +1.9 1,725,562 - AZOBR_RS08185 0.73 +1.9 1,725,672 + AZOBR_RS08185 0.89 +0.2 1,725,672 + AZOBR_RS08185 0.89 +0.2 1,725,673 - AZOBR_RS08185 0.89 +1.4 1,725,673 - AZOBR_RS08185 0.89 -0.3 1,725,673 - AZOBR_RS08185 0.89 -0.6 1,725,673 - AZOBR_RS08185 0.89 +0.1 1,725,729 + -0.6 1,725,729 + -0.1 1,725,729 + +1.3 1,725,730 - -0.2 1,725,750 + -0.8 1,725,750 + +0.3 1,725,751 - -0.2 1,725,830 - AZOBR_RS08190 0.17 -0.2 1,725,860 + AZOBR_RS08190 0.30 +0.1 1,725,861 - AZOBR_RS08190 0.31 +0.1 1,725,861 - AZOBR_RS08190 0.31 -1.6 1,726,034 + +0.1 1,726,035 - +1.2 1,726,054 + -0.3 1,726,057 + +0.6 1,726,057 + -0.3 1,726,057 + +0.4 1,726,057 + +0.1 1,726,058 - -0.6 1,726,058 - -1.1 1,726,058 - +0.3 1,726,111 - -0.3 1,726,239 - -0.9 1,726,909 + +0.9 1,727,064 + +1.9 1,727,064 + +1.9 1,727,064 + +0.9 1,727,064 + -1.2 1,727,104 - -0.1 1,727,273 + +2.9 1,727,274 - -1.0 1,727,341 + -0.5 1,727,341 + -0.6 1,727,342 - -0.4 1,727,342 - +0.9 1,727,375 + +0.4
Or see this region's nucleotide sequence