Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27395 and AZOBR_RS27400 are separated by 37 nucleotides AZOBR_RS27400 and AZOBR_RS27405 are separated by 606 nucleotides
AZOBR_RS27395: AZOBR_RS27395 - hypothetical protein, at 295,585 to 296,565
_RS27395
AZOBR_RS27400: AZOBR_RS27400 - transporter, at 296,603 to 297,739
_RS27400
AZOBR_RS27405: AZOBR_RS27405 - membrane protein of unknown function, at 298,346 to 298,753
_RS27405
Position (kb) 296
297
298 Strain fitness (log2 ratio) -2
-1
0
1
2 at 295.655 kb on + strand at 295.941 kb on - strand, within AZOBR_RS27395 at 296.330 kb on + strand, within AZOBR_RS27395 at 296.331 kb on - strand, within AZOBR_RS27395 at 296.331 kb on - strand, within AZOBR_RS27395 at 296.331 kb on - strand, within AZOBR_RS27395 at 296.354 kb on + strand, within AZOBR_RS27395 at 296.613 kb on + strand at 296.613 kb on + strand at 296.613 kb on + strand at 296.840 kb on + strand, within AZOBR_RS27400 at 296.841 kb on - strand, within AZOBR_RS27400 at 297.093 kb on + strand, within AZOBR_RS27400 at 297.306 kb on - strand, within AZOBR_RS27400 at 297.306 kb on - strand, within AZOBR_RS27400 at 297.597 kb on + strand, within AZOBR_RS27400 at 297.597 kb on + strand, within AZOBR_RS27400 at 297.597 kb on + strand, within AZOBR_RS27400 at 297.597 kb on + strand, within AZOBR_RS27400 at 297.597 kb on + strand, within AZOBR_RS27400 at 297.597 kb on + strand, within AZOBR_RS27400 at 297.601 kb on - strand, within AZOBR_RS27400 at 297.601 kb on - strand, within AZOBR_RS27400 at 297.806 kb on + strand at 297.806 kb on + strand at 297.806 kb on + strand at 297.807 kb on - strand at 297.977 kb on - strand at 298.175 kb on - strand at 298.178 kb on + strand at 298.179 kb on - strand at 298.183 kb on + strand at 298.219 kb on + strand at 298.219 kb on + strand at 298.222 kb on + strand at 298.223 kb on - strand at 298.257 kb on + strand at 298.257 kb on + strand at 298.275 kb on + strand at 298.276 kb on - strand at 298.276 kb on - strand at 298.282 kb on - strand at 298.309 kb on + strand at 298.345 kb on + strand at 298.345 kb on + strand at 298.491 kb on + strand, within AZOBR_RS27405 at 298.491 kb on + strand, within AZOBR_RS27405 at 298.491 kb on + strand, within AZOBR_RS27405 at 298.491 kb on + strand, within AZOBR_RS27405 at 298.491 kb on + strand, within AZOBR_RS27405 at 298.492 kb on - strand, within AZOBR_RS27405 at 298.492 kb on - strand, within AZOBR_RS27405 at 298.492 kb on - strand, within AZOBR_RS27405 at 298.535 kb on + strand, within AZOBR_RS27405 at 298.536 kb on - strand, within AZOBR_RS27405 at 298.536 kb on - strand, within AZOBR_RS27405 at 298.536 kb on - strand, within AZOBR_RS27405 at 298.549 kb on + strand, within AZOBR_RS27405 at 298.568 kb on - strand, within AZOBR_RS27405 at 298.588 kb on - strand, within AZOBR_RS27405 at 298.663 kb on + strand, within AZOBR_RS27405 at 298.672 kb on + strand, within AZOBR_RS27405 at 298.672 kb on + strand, within AZOBR_RS27405 at 298.673 kb on - strand, within AZOBR_RS27405 at 298.724 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 295,655 + +0.7 295,941 - AZOBR_RS27395 0.36 -0.6 296,330 + AZOBR_RS27395 0.76 -0.8 296,331 - AZOBR_RS27395 0.76 -0.1 296,331 - AZOBR_RS27395 0.76 -0.7 296,331 - AZOBR_RS27395 0.76 +1.3 296,354 + AZOBR_RS27395 0.78 -0.0 296,613 + -0.2 296,613 + +0.1 296,613 + -0.2 296,840 + AZOBR_RS27400 0.21 +0.3 296,841 - AZOBR_RS27400 0.21 -0.4 297,093 + AZOBR_RS27400 0.43 +0.0 297,306 - AZOBR_RS27400 0.62 -0.3 297,306 - AZOBR_RS27400 0.62 +1.5 297,597 + AZOBR_RS27400 0.87 +0.9 297,597 + AZOBR_RS27400 0.87 +0.3 297,597 + AZOBR_RS27400 0.87 +1.9 297,597 + AZOBR_RS27400 0.87 -0.1 297,597 + AZOBR_RS27400 0.87 +0.9 297,597 + AZOBR_RS27400 0.87 +1.9 297,601 - AZOBR_RS27400 0.88 +0.0 297,601 - AZOBR_RS27400 0.88 -0.7 297,806 + -0.5 297,806 + +1.9 297,806 + +0.3 297,807 - +1.4 297,977 - -0.8 298,175 - +2.4 298,178 + -1.2 298,179 - +0.3 298,183 + +0.3 298,219 + +2.4 298,219 + +1.9 298,222 + -1.1 298,223 - -1.0 298,257 + -1.6 298,257 + -0.5 298,275 + -0.3 298,276 - -0.7 298,276 - +1.9 298,282 - -0.5 298,309 + +0.5 298,345 + +1.9 298,345 + -2.5 298,491 + AZOBR_RS27405 0.36 +1.9 298,491 + AZOBR_RS27405 0.36 -0.2 298,491 + AZOBR_RS27405 0.36 +1.3 298,491 + AZOBR_RS27405 0.36 -0.1 298,491 + AZOBR_RS27405 0.36 +1.9 298,492 - AZOBR_RS27405 0.36 +0.9 298,492 - AZOBR_RS27405 0.36 -0.3 298,492 - AZOBR_RS27405 0.36 +1.9 298,535 + AZOBR_RS27405 0.46 +0.6 298,536 - AZOBR_RS27405 0.47 +1.9 298,536 - AZOBR_RS27405 0.47 -0.3 298,536 - AZOBR_RS27405 0.47 +0.3 298,549 + AZOBR_RS27405 0.50 +0.9 298,568 - AZOBR_RS27405 0.54 +0.3 298,588 - AZOBR_RS27405 0.59 -0.1 298,663 + AZOBR_RS27405 0.78 +0.9 298,672 + AZOBR_RS27405 0.80 -0.5 298,672 + AZOBR_RS27405 0.80 -0.2 298,673 - AZOBR_RS27405 0.80 +1.9 298,724 + +1.9
Or see this region's nucleotide sequence