Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16235 and AZOBR_RS16240 are separated by 217 nucleotides AZOBR_RS16240 and AZOBR_RS16245 are separated by 71 nucleotides AZOBR_RS16245 and AZOBR_RS16250 are separated by 75 nucleotides
AZOBR_RS16235: AZOBR_RS16235 - polyphosphate kinase, at 392,866 to 395,013
_RS16235
AZOBR_RS16240: AZOBR_RS16240 - phosphohistidine phosphatase, at 395,231 to 395,749
_RS16240
AZOBR_RS16245: AZOBR_RS16245 - metal-chelation protein CHAD, at 395,821 to 397,419
_RS16245
AZOBR_RS16250: AZOBR_RS16250 - LysR family transcriptional regulator, at 397,495 to 398,409
_RS16250
Position (kb) 395
396
397
398 Strain fitness (log2 ratio) -2
-1
0
1
2 at 394.826 kb on + strand at 395.050 kb on + strand at 395.102 kb on + strand at 395.103 kb on - strand at 395.103 kb on - strand at 395.111 kb on + strand at 395.111 kb on + strand at 395.111 kb on + strand at 395.111 kb on + strand at 395.112 kb on - strand at 395.112 kb on - strand at 395.112 kb on - strand at 395.112 kb on - strand at 395.138 kb on + strand at 395.141 kb on + strand at 395.141 kb on + strand at 395.142 kb on - strand at 395.155 kb on + strand at 395.156 kb on - strand at 395.158 kb on + strand at 395.244 kb on - strand at 395.244 kb on - strand at 395.244 kb on - strand at 395.244 kb on - strand at 395.480 kb on + strand, within AZOBR_RS16240 at 395.481 kb on - strand, within AZOBR_RS16240 at 395.747 kb on + strand at 395.986 kb on + strand, within AZOBR_RS16245 at 395.987 kb on - strand, within AZOBR_RS16245 at 395.989 kb on + strand, within AZOBR_RS16245 at 395.989 kb on + strand, within AZOBR_RS16245 at 395.989 kb on + strand, within AZOBR_RS16245 at 395.990 kb on - strand, within AZOBR_RS16245 at 395.990 kb on - strand, within AZOBR_RS16245 at 395.990 kb on - strand, within AZOBR_RS16245 at 395.990 kb on - strand, within AZOBR_RS16245 at 397.485 kb on + strand at 397.486 kb on - strand at 397.486 kb on - strand at 397.486 kb on - strand at 397.537 kb on + strand at 397.537 kb on + strand at 397.537 kb on + strand at 397.538 kb on - strand at 397.643 kb on + strand, within AZOBR_RS16250 at 397.830 kb on - strand, within AZOBR_RS16250 at 397.830 kb on - strand, within AZOBR_RS16250 at 398.236 kb on + strand, within AZOBR_RS16250
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 394,826 + -1.8 395,050 + -0.1 395,102 + -1.1 395,103 - +0.2 395,103 - -0.2 395,111 + -1.6 395,111 + -0.5 395,111 + -0.8 395,111 + -0.0 395,112 - -0.6 395,112 - +0.4 395,112 - -0.1 395,112 - -0.4 395,138 + +0.2 395,141 + -0.1 395,141 + +0.5 395,142 - +0.3 395,155 + -0.4 395,156 - -0.3 395,158 + +0.6 395,244 - -0.6 395,244 - +1.8 395,244 - +0.9 395,244 - +0.4 395,480 + AZOBR_RS16240 0.48 -0.2 395,481 - AZOBR_RS16240 0.48 -0.4 395,747 + -0.3 395,986 + AZOBR_RS16245 0.10 +0.1 395,987 - AZOBR_RS16245 0.10 +0.9 395,989 + AZOBR_RS16245 0.11 +1.1 395,989 + AZOBR_RS16245 0.11 +0.1 395,989 + AZOBR_RS16245 0.11 +0.2 395,990 - AZOBR_RS16245 0.11 -0.1 395,990 - AZOBR_RS16245 0.11 -0.3 395,990 - AZOBR_RS16245 0.11 -0.2 395,990 - AZOBR_RS16245 0.11 -0.2 397,485 + +0.8 397,486 - -0.2 397,486 - -0.0 397,486 - +0.3 397,537 + +1.2 397,537 + -1.3 397,537 + -0.6 397,538 - +0.2 397,643 + AZOBR_RS16250 0.16 +1.8 397,830 - AZOBR_RS16250 0.37 -0.1 397,830 - AZOBR_RS16250 0.37 -1.6 398,236 + AZOBR_RS16250 0.81 -1.6
Or see this region's nucleotide sequence