Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02391

Experiment: 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02390 and MPMX20_02391 are separated by 143 nucleotidesMPMX20_02391 and MPMX20_02392 are separated by 42 nucleotides MPMX20_02390: MPMX20_02390 - Arylamine N-acetyltransferase, at 2,523,096 to 2,523,941 _02390 MPMX20_02391: MPMX20_02391 - hypothetical protein, at 2,524,085 to 2,524,660 _02391 MPMX20_02392: MPMX20_02392 - Elongation factor G, at 2,524,703 to 2,526,802 _02392 Position (kb) 2524 2525Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 2523.132 kb on + strandat 2523.188 kb on + strand, within MPMX20_02390at 2523.208 kb on + strand, within MPMX20_02390at 2523.208 kb on + strand, within MPMX20_02390at 2523.260 kb on + strand, within MPMX20_02390at 2523.286 kb on - strand, within MPMX20_02390at 2523.286 kb on - strand, within MPMX20_02390at 2523.300 kb on - strand, within MPMX20_02390at 2523.335 kb on - strand, within MPMX20_02390at 2523.370 kb on + strand, within MPMX20_02390at 2523.397 kb on + strand, within MPMX20_02390at 2523.445 kb on - strand, within MPMX20_02390at 2523.591 kb on - strand, within MPMX20_02390at 2523.641 kb on + strand, within MPMX20_02390at 2523.651 kb on + strand, within MPMX20_02390at 2523.651 kb on + strand, within MPMX20_02390at 2523.651 kb on + strand, within MPMX20_02390at 2523.659 kb on - strand, within MPMX20_02390at 2523.659 kb on - strand, within MPMX20_02390at 2523.659 kb on - strand, within MPMX20_02390at 2523.659 kb on - strand, within MPMX20_02390at 2523.659 kb on - strand, within MPMX20_02390at 2523.666 kb on + strand, within MPMX20_02390at 2523.674 kb on - strand, within MPMX20_02390at 2523.674 kb on - strand, within MPMX20_02390at 2523.722 kb on - strand, within MPMX20_02390at 2523.955 kb on + strandat 2524.032 kb on - strandat 2524.079 kb on + strandat 2524.087 kb on - strandat 2524.148 kb on - strand, within MPMX20_02391at 2524.148 kb on - strand, within MPMX20_02391at 2524.148 kb on - strand, within MPMX20_02391at 2524.148 kb on - strand, within MPMX20_02391at 2524.189 kb on + strand, within MPMX20_02391at 2524.197 kb on - strand, within MPMX20_02391at 2524.224 kb on - strand, within MPMX20_02391at 2524.239 kb on + strand, within MPMX20_02391at 2524.275 kb on + strand, within MPMX20_02391at 2524.279 kb on + strand, within MPMX20_02391at 2524.403 kb on + strand, within MPMX20_02391at 2524.578 kb on + strand, within MPMX20_02391at 2524.586 kb on - strand, within MPMX20_02391at 2524.591 kb on - strand, within MPMX20_02391at 2524.593 kb on - strand, within MPMX20_02391at 2524.597 kb on + strand, within MPMX20_02391at 2524.737 kb on + strandat 2524.775 kb on + strandat 2524.800 kb on + strandat 2524.881 kb on + strandat 2524.920 kb on + strand, within MPMX20_02392at 2524.920 kb on + strand, within MPMX20_02392at 2524.965 kb on + strand, within MPMX20_02392at 2524.983 kb on - strand, within MPMX20_02392at 2525.011 kb on + strand, within MPMX20_02392at 2525.073 kb on + strand, within MPMX20_02392at 2525.081 kb on + strand, within MPMX20_02392at 2525.081 kb on + strand, within MPMX20_02392at 2525.089 kb on - strand, within MPMX20_02392at 2525.132 kb on + strand, within MPMX20_02392at 2525.140 kb on - strand, within MPMX20_02392at 2525.140 kb on - strand, within MPMX20_02392at 2525.167 kb on + strand, within MPMX20_02392at 2525.167 kb on + strand, within MPMX20_02392at 2525.182 kb on + strand, within MPMX20_02392at 2525.182 kb on + strand, within MPMX20_02392at 2525.190 kb on - strand, within MPMX20_02392at 2525.239 kb on + strand, within MPMX20_02392at 2525.239 kb on + strand, within MPMX20_02392at 2525.257 kb on - strand, within MPMX20_02392at 2525.262 kb on - strand, within MPMX20_02392at 2525.262 kb on - strand, within MPMX20_02392at 2525.264 kb on + strand, within MPMX20_02392at 2525.264 kb on + strand, within MPMX20_02392at 2525.272 kb on - strand, within MPMX20_02392at 2525.277 kb on - strand, within MPMX20_02392at 2525.304 kb on + strand, within MPMX20_02392at 2525.329 kb on + strand, within MPMX20_02392at 2525.339 kb on - strand, within MPMX20_02392at 2525.368 kb on + strand, within MPMX20_02392at 2525.461 kb on - strand, within MPMX20_02392at 2525.475 kb on + strand, within MPMX20_02392at 2525.483 kb on + strand, within MPMX20_02392

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010
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2,523,132 + -2.1
2,523,188 + MPMX20_02390 0.11 +0.2
2,523,208 + MPMX20_02390 0.13 +0.0
2,523,208 + MPMX20_02390 0.13 -2.9
2,523,260 + MPMX20_02390 0.19 -0.1
2,523,286 - MPMX20_02390 0.22 -0.7
2,523,286 - MPMX20_02390 0.22 +0.6
2,523,300 - MPMX20_02390 0.24 -1.5
2,523,335 - MPMX20_02390 0.28 +0.5
2,523,370 + MPMX20_02390 0.32 -0.6
2,523,397 + MPMX20_02390 0.36 +0.1
2,523,445 - MPMX20_02390 0.41 +0.5
2,523,591 - MPMX20_02390 0.59 -0.4
2,523,641 + MPMX20_02390 0.64 +1.3
2,523,651 + MPMX20_02390 0.66 -0.3
2,523,651 + MPMX20_02390 0.66 -1.1
2,523,651 + MPMX20_02390 0.66 -1.4
2,523,659 - MPMX20_02390 0.67 -0.6
2,523,659 - MPMX20_02390 0.67 -0.7
2,523,659 - MPMX20_02390 0.67 -1.3
2,523,659 - MPMX20_02390 0.67 -1.5
2,523,659 - MPMX20_02390 0.67 +3.2
2,523,666 + MPMX20_02390 0.67 +2.4
2,523,674 - MPMX20_02390 0.68 +1.2
2,523,674 - MPMX20_02390 0.68 -1.1
2,523,722 - MPMX20_02390 0.74 +1.5
2,523,955 + -1.4
2,524,032 - -0.2
2,524,079 + -0.7
2,524,087 - +0.2
2,524,148 - MPMX20_02391 0.11 +1.5
2,524,148 - MPMX20_02391 0.11 +0.5
2,524,148 - MPMX20_02391 0.11 -0.2
2,524,148 - MPMX20_02391 0.11 +1.2
2,524,189 + MPMX20_02391 0.18 -0.9
2,524,197 - MPMX20_02391 0.19 +0.8
2,524,224 - MPMX20_02391 0.24 -1.1
2,524,239 + MPMX20_02391 0.27 +1.7
2,524,275 + MPMX20_02391 0.33 +0.1
2,524,279 + MPMX20_02391 0.34 +6.0
2,524,403 + MPMX20_02391 0.55 -0.5
2,524,578 + MPMX20_02391 0.86 -0.3
2,524,586 - MPMX20_02391 0.87 +2.8
2,524,591 - MPMX20_02391 0.88 -2.0
2,524,593 - MPMX20_02391 0.88 +0.3
2,524,597 + MPMX20_02391 0.89 +0.1
2,524,737 + -1.7
2,524,775 + +0.3
2,524,800 + -1.9
2,524,881 + +0.4
2,524,920 + MPMX20_02392 0.10 +0.2
2,524,920 + MPMX20_02392 0.10 +1.1
2,524,965 + MPMX20_02392 0.12 -0.9
2,524,983 - MPMX20_02392 0.13 -1.4
2,525,011 + MPMX20_02392 0.15 -2.2
2,525,073 + MPMX20_02392 0.18 -0.7
2,525,081 + MPMX20_02392 0.18 -0.5
2,525,081 + MPMX20_02392 0.18 -0.0
2,525,089 - MPMX20_02392 0.18 +1.9
2,525,132 + MPMX20_02392 0.20 +0.6
2,525,140 - MPMX20_02392 0.21 +1.4
2,525,140 - MPMX20_02392 0.21 -0.1
2,525,167 + MPMX20_02392 0.22 -1.6
2,525,167 + MPMX20_02392 0.22 +0.3
2,525,182 + MPMX20_02392 0.23 -1.0
2,525,182 + MPMX20_02392 0.23 +0.4
2,525,190 - MPMX20_02392 0.23 -0.3
2,525,239 + MPMX20_02392 0.26 +1.2
2,525,239 + MPMX20_02392 0.26 -0.5
2,525,257 - MPMX20_02392 0.26 -0.1
2,525,262 - MPMX20_02392 0.27 +1.3
2,525,262 - MPMX20_02392 0.27 +1.2
2,525,264 + MPMX20_02392 0.27 +0.4
2,525,264 + MPMX20_02392 0.27 +0.2
2,525,272 - MPMX20_02392 0.27 -0.6
2,525,277 - MPMX20_02392 0.27 -0.3
2,525,304 + MPMX20_02392 0.29 -1.3
2,525,329 + MPMX20_02392 0.30 -1.8
2,525,339 - MPMX20_02392 0.30 -1.7
2,525,368 + MPMX20_02392 0.32 -1.3
2,525,461 - MPMX20_02392 0.36 -0.1
2,525,475 + MPMX20_02392 0.37 +1.4
2,525,483 + MPMX20_02392 0.37 -0.3

Or see this region's nucleotide sequence