Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00921

Experiment: 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00919 and MPMX20_00920 overlap by 1 nucleotidesMPMX20_00920 and MPMX20_00921 are separated by 101 nucleotidesMPMX20_00921 and MPMX20_00922 are separated by 54 nucleotides MPMX20_00919: MPMX20_00919 - Na(+)-translocating NADH-quinone reductase subunit F, at 967,721 to 968,944 _00919 MPMX20_00920: MPMX20_00920 - hypothetical protein, at 968,944 to 969,147 _00920 MPMX20_00921: MPMX20_00921 - DNA polymerase IV, at 969,249 to 970,307 _00921 MPMX20_00922: MPMX20_00922 - Cytosol non-specific dipeptidase, at 970,362 to 971,819 _00922 Position (kb) 969 970 971Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 968.258 kb on + strand, within MPMX20_00919at 968.278 kb on + strand, within MPMX20_00919at 968.286 kb on - strand, within MPMX20_00919at 968.372 kb on + strand, within MPMX20_00919at 968.372 kb on + strand, within MPMX20_00919at 968.372 kb on + strand, within MPMX20_00919at 968.422 kb on + strand, within MPMX20_00919at 968.504 kb on - strand, within MPMX20_00919at 968.602 kb on + strand, within MPMX20_00919at 968.646 kb on + strand, within MPMX20_00919at 968.778 kb on - strand, within MPMX20_00919at 968.861 kb on + strandat 968.861 kb on + strandat 969.019 kb on - strand, within MPMX20_00920at 969.029 kb on - strand, within MPMX20_00920at 969.041 kb on + strand, within MPMX20_00920at 969.041 kb on + strand, within MPMX20_00920at 969.044 kb on - strand, within MPMX20_00920at 969.044 kb on - strand, within MPMX20_00920at 969.086 kb on + strand, within MPMX20_00920at 969.086 kb on + strand, within MPMX20_00920at 969.088 kb on + strand, within MPMX20_00920at 969.094 kb on - strand, within MPMX20_00920at 969.147 kb on - strandat 969.156 kb on + strandat 969.169 kb on + strandat 969.177 kb on - strandat 969.182 kb on + strandat 969.240 kb on + strandat 969.302 kb on - strandat 969.357 kb on - strand, within MPMX20_00921at 969.357 kb on - strand, within MPMX20_00921at 969.357 kb on - strand, within MPMX20_00921at 969.362 kb on - strand, within MPMX20_00921at 969.376 kb on - strand, within MPMX20_00921at 969.380 kb on + strand, within MPMX20_00921at 969.380 kb on + strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.388 kb on - strand, within MPMX20_00921at 969.407 kb on + strand, within MPMX20_00921at 969.420 kb on - strand, within MPMX20_00921at 969.424 kb on + strand, within MPMX20_00921at 969.440 kb on + strand, within MPMX20_00921at 969.526 kb on + strand, within MPMX20_00921at 969.534 kb on - strand, within MPMX20_00921at 969.554 kb on + strand, within MPMX20_00921at 969.562 kb on - strand, within MPMX20_00921at 969.565 kb on + strand, within MPMX20_00921at 969.582 kb on + strand, within MPMX20_00921at 969.585 kb on - strand, within MPMX20_00921at 969.587 kb on + strand, within MPMX20_00921at 969.609 kb on - strand, within MPMX20_00921at 969.636 kb on + strand, within MPMX20_00921at 969.703 kb on + strand, within MPMX20_00921at 969.719 kb on + strand, within MPMX20_00921at 969.731 kb on + strand, within MPMX20_00921at 969.734 kb on - strand, within MPMX20_00921at 969.750 kb on - strand, within MPMX20_00921at 969.750 kb on - strand, within MPMX20_00921at 969.753 kb on + strand, within MPMX20_00921at 969.761 kb on - strand, within MPMX20_00921at 969.889 kb on - strand, within MPMX20_00921at 969.931 kb on + strand, within MPMX20_00921at 969.939 kb on - strand, within MPMX20_00921at 969.953 kb on - strand, within MPMX20_00921at 969.973 kb on - strand, within MPMX20_00921at 969.995 kb on + strand, within MPMX20_00921at 970.010 kb on + strand, within MPMX20_00921at 970.030 kb on - strand, within MPMX20_00921at 970.031 kb on + strand, within MPMX20_00921at 970.049 kb on - strand, within MPMX20_00921at 970.241 kb on - strandat 970.335 kb on + strandat 970.337 kb on + strandat 970.343 kb on - strandat 970.378 kb on + strandat 970.386 kb on - strandat 970.386 kb on - strandat 970.392 kb on + strandat 970.426 kb on + strandat 970.434 kb on - strandat 970.504 kb on + strandat 970.521 kb on + strand, within MPMX20_00922at 970.521 kb on + strand, within MPMX20_00922at 970.521 kb on + strand, within MPMX20_00922at 970.521 kb on + strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.529 kb on - strand, within MPMX20_00922at 970.535 kb on + strand, within MPMX20_00922at 970.556 kb on - strand, within MPMX20_00922at 970.566 kb on - strand, within MPMX20_00922at 970.566 kb on - strand, within MPMX20_00922at 970.568 kb on - strand, within MPMX20_00922at 970.711 kb on - strand, within MPMX20_00922at 970.745 kb on - strand, within MPMX20_00922at 970.788 kb on + strand, within MPMX20_00922at 970.881 kb on + strand, within MPMX20_00922at 970.919 kb on - strand, within MPMX20_00922at 970.966 kb on + strand, within MPMX20_00922at 971.028 kb on + strand, within MPMX20_00922at 971.036 kb on - strand, within MPMX20_00922at 971.070 kb on + strand, within MPMX20_00922at 971.145 kb on + strand, within MPMX20_00922at 971.145 kb on + strand, within MPMX20_00922at 971.145 kb on + strand, within MPMX20_00922at 971.145 kb on + strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.153 kb on - strand, within MPMX20_00922at 971.167 kb on + strand, within MPMX20_00922at 971.175 kb on - strand, within MPMX20_00922at 971.212 kb on - strand, within MPMX20_00922at 971.222 kb on - strand, within MPMX20_00922at 971.293 kb on + strand, within MPMX20_00922

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010
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968,258 + MPMX20_00919 0.44 -1.9
968,278 + MPMX20_00919 0.46 +2.0
968,286 - MPMX20_00919 0.46 +0.6
968,372 + MPMX20_00919 0.53 -0.8
968,372 + MPMX20_00919 0.53 +0.2
968,372 + MPMX20_00919 0.53 +3.6
968,422 + MPMX20_00919 0.57 -1.4
968,504 - MPMX20_00919 0.64 +1.4
968,602 + MPMX20_00919 0.72 +0.1
968,646 + MPMX20_00919 0.76 +0.0
968,778 - MPMX20_00919 0.86 -0.5
968,861 + +0.4
968,861 + +2.2
969,019 - MPMX20_00920 0.37 -0.3
969,029 - MPMX20_00920 0.42 +0.6
969,041 + MPMX20_00920 0.48 +1.6
969,041 + MPMX20_00920 0.48 +1.0
969,044 - MPMX20_00920 0.49 -1.1
969,044 - MPMX20_00920 0.49 -0.6
969,086 + MPMX20_00920 0.70 +0.1
969,086 + MPMX20_00920 0.70 -1.4
969,088 + MPMX20_00920 0.71 +1.3
969,094 - MPMX20_00920 0.74 +3.0
969,147 - -1.3
969,156 + -0.4
969,169 + -0.8
969,177 - +1.2
969,182 + +1.1
969,240 + +1.9
969,302 - +1.4
969,357 - MPMX20_00921 0.10 -1.3
969,357 - MPMX20_00921 0.10 -0.8
969,357 - MPMX20_00921 0.10 -2.8
969,362 - MPMX20_00921 0.11 +2.0
969,376 - MPMX20_00921 0.12 -0.7
969,380 + MPMX20_00921 0.12 -0.8
969,380 + MPMX20_00921 0.12 +1.7
969,388 - MPMX20_00921 0.13 -1.7
969,388 - MPMX20_00921 0.13 +1.9
969,388 - MPMX20_00921 0.13 -1.5
969,388 - MPMX20_00921 0.13 +5.1
969,388 - MPMX20_00921 0.13 +1.0
969,407 + MPMX20_00921 0.15 -1.0
969,420 - MPMX20_00921 0.16 +0.6
969,424 + MPMX20_00921 0.17 -0.5
969,440 + MPMX20_00921 0.18 +0.1
969,526 + MPMX20_00921 0.26 -1.6
969,534 - MPMX20_00921 0.27 +2.6
969,554 + MPMX20_00921 0.29 -0.2
969,562 - MPMX20_00921 0.30 -1.5
969,565 + MPMX20_00921 0.30 +1.3
969,582 + MPMX20_00921 0.31 +1.0
969,585 - MPMX20_00921 0.32 -0.4
969,587 + MPMX20_00921 0.32 +1.8
969,609 - MPMX20_00921 0.34 -1.5
969,636 + MPMX20_00921 0.37 -0.3
969,703 + MPMX20_00921 0.43 -0.0
969,719 + MPMX20_00921 0.44 +0.4
969,731 + MPMX20_00921 0.46 -0.3
969,734 - MPMX20_00921 0.46 -1.0
969,750 - MPMX20_00921 0.47 -0.3
969,750 - MPMX20_00921 0.47 -0.1
969,753 + MPMX20_00921 0.48 -1.7
969,761 - MPMX20_00921 0.48 -0.9
969,889 - MPMX20_00921 0.60 -0.7
969,931 + MPMX20_00921 0.64 +1.4
969,939 - MPMX20_00921 0.65 -0.3
969,953 - MPMX20_00921 0.66 +0.7
969,973 - MPMX20_00921 0.68 -0.1
969,995 + MPMX20_00921 0.70 +1.4
970,010 + MPMX20_00921 0.72 -0.2
970,030 - MPMX20_00921 0.74 +2.5
970,031 + MPMX20_00921 0.74 -0.9
970,049 - MPMX20_00921 0.76 +0.5
970,241 - -1.5
970,335 + +0.5
970,337 + -0.6
970,343 - +0.4
970,378 + +2.3
970,386 - -1.6
970,386 - -2.6
970,392 + -1.4
970,426 + -1.4
970,434 - +0.2
970,504 + -0.5
970,521 + MPMX20_00922 0.11 +2.2
970,521 + MPMX20_00922 0.11 +0.0
970,521 + MPMX20_00922 0.11 +0.2
970,521 + MPMX20_00922 0.11 -0.8
970,529 - MPMX20_00922 0.11 -1.8
970,529 - MPMX20_00922 0.11 -1.6
970,529 - MPMX20_00922 0.11 -1.1
970,529 - MPMX20_00922 0.11 +1.7
970,529 - MPMX20_00922 0.11 -0.3
970,529 - MPMX20_00922 0.11 -1.1
970,529 - MPMX20_00922 0.11 +1.4
970,529 - MPMX20_00922 0.11 +0.4
970,535 + MPMX20_00922 0.12 +1.0
970,556 - MPMX20_00922 0.13 +0.8
970,566 - MPMX20_00922 0.14 +0.0
970,566 - MPMX20_00922 0.14 +0.0
970,568 - MPMX20_00922 0.14 -1.4
970,711 - MPMX20_00922 0.24 +1.3
970,745 - MPMX20_00922 0.26 -0.0
970,788 + MPMX20_00922 0.29 +0.9
970,881 + MPMX20_00922 0.36 -0.3
970,919 - MPMX20_00922 0.38 +2.4
970,966 + MPMX20_00922 0.41 -0.3
971,028 + MPMX20_00922 0.46 -0.6
971,036 - MPMX20_00922 0.46 -0.9
971,070 + MPMX20_00922 0.49 +0.5
971,145 + MPMX20_00922 0.54 -0.3
971,145 + MPMX20_00922 0.54 -0.4
971,145 + MPMX20_00922 0.54 +0.7
971,145 + MPMX20_00922 0.54 -0.4
971,153 - MPMX20_00922 0.54 -0.6
971,153 - MPMX20_00922 0.54 +0.1
971,153 - MPMX20_00922 0.54 -1.3
971,153 - MPMX20_00922 0.54 +0.3
971,153 - MPMX20_00922 0.54 +0.3
971,167 + MPMX20_00922 0.55 +1.0
971,175 - MPMX20_00922 0.56 -1.2
971,212 - MPMX20_00922 0.58 -1.3
971,222 - MPMX20_00922 0.59 +0.3
971,293 + MPMX20_00922 0.64 +0.6

Or see this region's nucleotide sequence