Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04626

Experiment: M9 plate, 1:1 coculture with Pseudomonas silesiensis TBS_010

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04624 and MPMX20_04625 are separated by 90 nucleotidesMPMX20_04625 and MPMX20_04626 are separated by 374 nucleotidesMPMX20_04626 and MPMX20_04627 are separated by 100 nucleotides MPMX20_04624: MPMX20_04624 - Regulatory protein AsnC, at 4,844,300 to 4,844,758 _04624 MPMX20_04625: MPMX20_04625 - Protein MioC, at 4,844,849 to 4,845,298 _04625 MPMX20_04626: MPMX20_04626 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, at 4,845,673 to 4,847,562 _04626 MPMX20_04627: MPMX20_04627 - Ribosomal RNA small subunit methyltransferase G, at 4,847,663 to 4,848,286 _04627 Position (kb) 4845 4846 4847 4848Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4844.856 kb on + strandat 4844.856 kb on + strandat 4844.864 kb on - strandat 4844.864 kb on - strandat 4844.879 kb on + strandat 4844.887 kb on - strandat 4844.887 kb on - strandat 4844.887 kb on - strandat 4844.887 kb on - strandat 4844.887 kb on - strandat 4844.931 kb on - strand, within MPMX20_04625at 4844.931 kb on - strand, within MPMX20_04625at 4844.931 kb on - strand, within MPMX20_04625at 4844.969 kb on - strand, within MPMX20_04625at 4845.009 kb on + strand, within MPMX20_04625at 4845.086 kb on - strand, within MPMX20_04625at 4845.112 kb on + strand, within MPMX20_04625at 4845.123 kb on + strand, within MPMX20_04625at 4845.123 kb on + strand, within MPMX20_04625at 4845.186 kb on + strand, within MPMX20_04625at 4845.207 kb on - strand, within MPMX20_04625at 4845.580 kb on + strandat 4845.581 kb on + strandat 4845.589 kb on - strandat 4845.624 kb on + strandat 4845.661 kb on + strandat 4846.179 kb on + strand, within MPMX20_04626at 4846.179 kb on + strand, within MPMX20_04626at 4846.221 kb on + strand, within MPMX20_04626at 4846.223 kb on + strand, within MPMX20_04626at 4846.413 kb on - strand, within MPMX20_04626at 4846.457 kb on + strand, within MPMX20_04626at 4846.483 kb on + strand, within MPMX20_04626at 4846.557 kb on - strand, within MPMX20_04626at 4846.654 kb on + strand, within MPMX20_04626at 4846.654 kb on + strand, within MPMX20_04626at 4846.660 kb on + strand, within MPMX20_04626at 4846.767 kb on + strand, within MPMX20_04626at 4846.803 kb on + strand, within MPMX20_04626at 4846.869 kb on + strand, within MPMX20_04626at 4847.043 kb on + strand, within MPMX20_04626at 4847.060 kb on + strand, within MPMX20_04626at 4847.101 kb on + strand, within MPMX20_04626at 4847.216 kb on + strand, within MPMX20_04626at 4847.327 kb on - strand, within MPMX20_04626at 4847.407 kb on - strandat 4847.453 kb on + strandat 4847.458 kb on + strandat 4847.503 kb on - strandat 4847.750 kb on + strand, within MPMX20_04627at 4847.787 kb on - strand, within MPMX20_04627at 4847.789 kb on + strand, within MPMX20_04627at 4847.817 kb on + strand, within MPMX20_04627at 4847.885 kb on + strand, within MPMX20_04627at 4847.885 kb on + strand, within MPMX20_04627at 4847.885 kb on + strand, within MPMX20_04627at 4847.886 kb on + strand, within MPMX20_04627at 4847.886 kb on + strand, within MPMX20_04627at 4847.886 kb on + strand, within MPMX20_04627at 4847.893 kb on - strand, within MPMX20_04627at 4847.894 kb on - strand, within MPMX20_04627at 4847.894 kb on - strand, within MPMX20_04627at 4847.894 kb on - strand, within MPMX20_04627at 4847.952 kb on + strand, within MPMX20_04627at 4848.015 kb on + strand, within MPMX20_04627at 4848.015 kb on + strand, within MPMX20_04627at 4848.015 kb on + strand, within MPMX20_04627at 4848.020 kb on + strand, within MPMX20_04627at 4848.020 kb on + strand, within MPMX20_04627at 4848.020 kb on + strand, within MPMX20_04627at 4848.023 kb on - strand, within MPMX20_04627at 4848.025 kb on + strand, within MPMX20_04627at 4848.025 kb on + strand, within MPMX20_04627at 4848.025 kb on - strand, within MPMX20_04627at 4848.028 kb on - strand, within MPMX20_04627at 4848.028 kb on - strand, within MPMX20_04627at 4848.028 kb on - strand, within MPMX20_04627at 4848.028 kb on - strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.053 kb on - strand, within MPMX20_04627at 4848.068 kb on + strand, within MPMX20_04627at 4848.068 kb on + strand, within MPMX20_04627at 4848.068 kb on + strand, within MPMX20_04627at 4848.076 kb on - strand, within MPMX20_04627at 4848.076 kb on - strand, within MPMX20_04627at 4848.118 kb on + strand, within MPMX20_04627at 4848.119 kb on - strand, within MPMX20_04627at 4848.119 kb on - strand, within MPMX20_04627at 4848.126 kb on - strand, within MPMX20_04627at 4848.221 kb on + strand, within MPMX20_04627at 4848.238 kb on + strandat 4848.238 kb on + strandat 4848.238 kb on + strandat 4848.238 kb on + strandat 4848.244 kb on + strandat 4848.246 kb on - strandat 4848.246 kb on - strandat 4848.253 kb on - strandat 4848.253 kb on - strandat 4848.259 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.366 kb on + strandat 4848.374 kb on + strandat 4848.374 kb on - strandat 4848.382 kb on - strandat 4848.406 kb on + strandat 4848.415 kb on + strandat 4848.415 kb on + strandat 4848.433 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Pseudomonas silesiensis TBS_010
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4,844,856 + -0.8
4,844,856 + +0.2
4,844,864 - +2.1
4,844,864 - -1.2
4,844,879 + -0.3
4,844,887 - -0.6
4,844,887 - -1.2
4,844,887 - +1.0
4,844,887 - +0.5
4,844,887 - +0.8
4,844,931 - MPMX20_04625 0.18 +0.5
4,844,931 - MPMX20_04625 0.18 +1.0
4,844,931 - MPMX20_04625 0.18 -1.5
4,844,969 - MPMX20_04625 0.27 +0.4
4,845,009 + MPMX20_04625 0.36 -0.0
4,845,086 - MPMX20_04625 0.53 +0.5
4,845,112 + MPMX20_04625 0.58 +0.5
4,845,123 + MPMX20_04625 0.61 +0.1
4,845,123 + MPMX20_04625 0.61 +1.5
4,845,186 + MPMX20_04625 0.75 +1.5
4,845,207 - MPMX20_04625 0.80 +1.3
4,845,580 + +0.5
4,845,581 + -2.2
4,845,589 - +2.1
4,845,624 + -0.5
4,845,661 + +3.1
4,846,179 + MPMX20_04626 0.27 -1.4
4,846,179 + MPMX20_04626 0.27 -0.3
4,846,221 + MPMX20_04626 0.29 +1.5
4,846,223 + MPMX20_04626 0.29 -0.0
4,846,413 - MPMX20_04626 0.39 +1.0
4,846,457 + MPMX20_04626 0.41 -2.0
4,846,483 + MPMX20_04626 0.43 -0.5
4,846,557 - MPMX20_04626 0.47 +0.5
4,846,654 + MPMX20_04626 0.52 -1.0
4,846,654 + MPMX20_04626 0.52 +1.2
4,846,660 + MPMX20_04626 0.52 +0.5
4,846,767 + MPMX20_04626 0.58 -1.5
4,846,803 + MPMX20_04626 0.60 -0.3
4,846,869 + MPMX20_04626 0.63 -1.4
4,847,043 + MPMX20_04626 0.72 +1.0
4,847,060 + MPMX20_04626 0.73 +1.5
4,847,101 + MPMX20_04626 0.76 +0.5
4,847,216 + MPMX20_04626 0.82 +0.2
4,847,327 - MPMX20_04626 0.88 -0.9
4,847,407 - -1.7
4,847,453 + -0.5
4,847,458 + -0.6
4,847,503 - +0.2
4,847,750 + MPMX20_04627 0.14 +0.5
4,847,787 - MPMX20_04627 0.20 -0.0
4,847,789 + MPMX20_04627 0.20 +2.5
4,847,817 + MPMX20_04627 0.25 +2.5
4,847,885 + MPMX20_04627 0.36 +1.0
4,847,885 + MPMX20_04627 0.36 +0.4
4,847,885 + MPMX20_04627 0.36 -1.2
4,847,886 + MPMX20_04627 0.36 +0.2
4,847,886 + MPMX20_04627 0.36 -1.0
4,847,886 + MPMX20_04627 0.36 +0.2
4,847,893 - MPMX20_04627 0.37 +3.3
4,847,894 - MPMX20_04627 0.37 +3.1
4,847,894 - MPMX20_04627 0.37 +0.6
4,847,894 - MPMX20_04627 0.37 +1.0
4,847,952 + MPMX20_04627 0.46 -0.3
4,848,015 + MPMX20_04627 0.56 -0.3
4,848,015 + MPMX20_04627 0.56 +0.5
4,848,015 + MPMX20_04627 0.56 -0.4
4,848,020 + MPMX20_04627 0.57 -0.2
4,848,020 + MPMX20_04627 0.57 +0.1
4,848,020 + MPMX20_04627 0.57 +0.3
4,848,023 - MPMX20_04627 0.58 -2.5
4,848,025 + MPMX20_04627 0.58 -2.0
4,848,025 + MPMX20_04627 0.58 +1.3
4,848,025 - MPMX20_04627 0.58 +1.5
4,848,028 - MPMX20_04627 0.58 +0.2
4,848,028 - MPMX20_04627 0.58 -0.9
4,848,028 - MPMX20_04627 0.58 -0.1
4,848,028 - MPMX20_04627 0.58 -2.3
4,848,030 + MPMX20_04627 0.59 -0.6
4,848,030 + MPMX20_04627 0.59 +2.5
4,848,030 + MPMX20_04627 0.59 +1.0
4,848,030 + MPMX20_04627 0.59 -0.1
4,848,030 + MPMX20_04627 0.59 +1.7
4,848,030 + MPMX20_04627 0.59 +2.5
4,848,030 + MPMX20_04627 0.59 +0.3
4,848,030 + MPMX20_04627 0.59 -0.9
4,848,030 + MPMX20_04627 0.59 +0.5
4,848,030 + MPMX20_04627 0.59 +0.4
4,848,030 + MPMX20_04627 0.59 +0.5
4,848,030 + MPMX20_04627 0.59 -0.5
4,848,033 - MPMX20_04627 0.59 -0.7
4,848,033 - MPMX20_04627 0.59 +1.4
4,848,033 - MPMX20_04627 0.59 -0.1
4,848,033 - MPMX20_04627 0.59 +1.1
4,848,033 - MPMX20_04627 0.59 +1.1
4,848,033 - MPMX20_04627 0.59 -2.3
4,848,038 - MPMX20_04627 0.60 +1.0
4,848,038 - MPMX20_04627 0.60 +0.7
4,848,038 - MPMX20_04627 0.60 +0.5
4,848,038 - MPMX20_04627 0.60 -0.3
4,848,038 - MPMX20_04627 0.60 +0.5
4,848,038 - MPMX20_04627 0.60 +1.0
4,848,038 - MPMX20_04627 0.60 -0.3
4,848,053 - MPMX20_04627 0.62 -0.8
4,848,068 + MPMX20_04627 0.65 -0.0
4,848,068 + MPMX20_04627 0.65 -0.4
4,848,068 + MPMX20_04627 0.65 -0.2
4,848,076 - MPMX20_04627 0.66 -0.6
4,848,076 - MPMX20_04627 0.66 +3.7
4,848,118 + MPMX20_04627 0.73 +0.9
4,848,119 - MPMX20_04627 0.73 -0.5
4,848,119 - MPMX20_04627 0.73 -0.6
4,848,126 - MPMX20_04627 0.74 +0.5
4,848,221 + MPMX20_04627 0.89 +1.3
4,848,238 + -0.8
4,848,238 + -2.2
4,848,238 + +1.8
4,848,238 + -0.0
4,848,244 + -0.5
4,848,246 - +1.7
4,848,246 - -0.5
4,848,253 - +1.4
4,848,253 - -0.2
4,848,259 + +1.2
4,848,317 + -0.0
4,848,317 + -0.8
4,848,317 + -0.0
4,848,317 + -1.5
4,848,317 + -0.0
4,848,317 + +0.5
4,848,317 + +0.5
4,848,317 + -0.7
4,848,317 + +1.3
4,848,317 + +1.5
4,848,317 + -0.2
4,848,317 + +0.2
4,848,317 + -0.4
4,848,317 + -0.9
4,848,325 - -2.1
4,848,325 - +1.1
4,848,325 - +0.7
4,848,325 - -1.0
4,848,325 - -1.3
4,848,325 - -1.5
4,848,366 + +0.7
4,848,374 + +0.3
4,848,374 - -0.9
4,848,382 - -0.3
4,848,406 + -0.6
4,848,415 + +0.7
4,848,415 + +0.2
4,848,433 + +0.3

Or see this region's nucleotide sequence