Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00167

Experiment: 0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00166 and MPMX20_00167 are separated by 103 nucleotidesMPMX20_00167 and MPMX20_00168 overlap by 1 nucleotidesMPMX20_00168 and MPMX20_00169 overlap by 8 nucleotides MPMX20_00166: MPMX20_00166 - Xylulose kinase, at 172,472 to 173,926 _00166 MPMX20_00167: MPMX20_00167 - hypothetical protein, at 174,030 to 174,569 _00167 MPMX20_00168: MPMX20_00168 - HTH-type transcriptional regulator CdhR, at 174,569 to 175,489 _00168 MPMX20_00169: MPMX20_00169 - O-acetyltransferase WecH, at 175,482 to 176,477 _00169 Position (kb) 174 175Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 173.103 kb on + strand, within MPMX20_00166at 173.103 kb on + strand, within MPMX20_00166at 173.111 kb on - strand, within MPMX20_00166at 173.230 kb on + strand, within MPMX20_00166at 173.255 kb on - strand, within MPMX20_00166at 173.312 kb on - strand, within MPMX20_00166at 173.340 kb on - strand, within MPMX20_00166at 173.345 kb on - strand, within MPMX20_00166at 173.361 kb on + strand, within MPMX20_00166at 173.486 kb on + strand, within MPMX20_00166at 173.486 kb on + strand, within MPMX20_00166at 173.486 kb on + strand, within MPMX20_00166at 173.554 kb on + strand, within MPMX20_00166at 173.557 kb on - strand, within MPMX20_00166at 173.587 kb on - strand, within MPMX20_00166at 173.587 kb on - strand, within MPMX20_00166at 173.598 kb on + strand, within MPMX20_00166at 173.598 kb on + strand, within MPMX20_00166at 173.609 kb on + strand, within MPMX20_00166at 173.609 kb on + strand, within MPMX20_00166at 173.617 kb on - strand, within MPMX20_00166at 173.622 kb on + strand, within MPMX20_00166at 173.640 kb on - strand, within MPMX20_00166at 173.668 kb on - strand, within MPMX20_00166at 173.732 kb on + strand, within MPMX20_00166at 173.746 kb on + strand, within MPMX20_00166at 173.746 kb on + strand, within MPMX20_00166at 173.772 kb on - strand, within MPMX20_00166at 173.820 kb on + strandat 173.834 kb on + strandat 173.874 kb on + strandat 173.945 kb on + strandat 173.946 kb on + strandat 173.979 kb on - strandat 174.000 kb on + strandat 174.000 kb on + strandat 174.002 kb on + strandat 174.112 kb on + strand, within MPMX20_00167at 174.137 kb on + strand, within MPMX20_00167at 174.137 kb on + strand, within MPMX20_00167at 174.145 kb on - strand, within MPMX20_00167at 174.197 kb on - strand, within MPMX20_00167at 174.197 kb on - strand, within MPMX20_00167at 174.197 kb on - strand, within MPMX20_00167at 174.339 kb on - strand, within MPMX20_00167at 174.339 kb on - strand, within MPMX20_00167at 174.366 kb on + strand, within MPMX20_00167at 174.366 kb on + strand, within MPMX20_00167at 174.366 kb on + strand, within MPMX20_00167at 174.366 kb on + strand, within MPMX20_00167at 174.366 kb on + strand, within MPMX20_00167at 174.392 kb on + strand, within MPMX20_00167at 174.397 kb on + strand, within MPMX20_00167at 174.405 kb on - strand, within MPMX20_00167at 174.405 kb on - strand, within MPMX20_00167at 174.407 kb on + strand, within MPMX20_00167at 174.415 kb on - strand, within MPMX20_00167at 174.415 kb on - strand, within MPMX20_00167at 174.415 kb on - strand, within MPMX20_00167at 174.415 kb on - strand, within MPMX20_00167at 174.415 kb on - strand, within MPMX20_00167at 174.422 kb on - strand, within MPMX20_00167at 174.466 kb on + strand, within MPMX20_00167at 174.564 kb on + strandat 174.624 kb on - strandat 174.635 kb on - strandat 174.670 kb on + strand, within MPMX20_00168at 174.670 kb on + strand, within MPMX20_00168at 174.715 kb on + strand, within MPMX20_00168at 174.726 kb on + strand, within MPMX20_00168at 174.734 kb on - strand, within MPMX20_00168at 174.894 kb on + strand, within MPMX20_00168at 174.902 kb on - strand, within MPMX20_00168at 174.902 kb on - strand, within MPMX20_00168at 174.902 kb on - strand, within MPMX20_00168at 174.933 kb on + strand, within MPMX20_00168at 174.943 kb on + strand, within MPMX20_00168at 174.945 kb on + strand, within MPMX20_00168at 174.951 kb on - strand, within MPMX20_00168at 175.037 kb on + strand, within MPMX20_00168at 175.045 kb on - strand, within MPMX20_00168at 175.079 kb on - strand, within MPMX20_00168at 175.079 kb on - strand, within MPMX20_00168at 175.089 kb on - strand, within MPMX20_00168at 175.155 kb on + strand, within MPMX20_00168at 175.242 kb on + strand, within MPMX20_00168at 175.259 kb on + strand, within MPMX20_00168at 175.267 kb on - strand, within MPMX20_00168at 175.267 kb on - strand, within MPMX20_00168at 175.356 kb on + strand, within MPMX20_00168at 175.356 kb on + strand, within MPMX20_00168at 175.410 kb on + strandat 175.415 kb on + strandat 175.418 kb on - strandat 175.418 kb on - strandat 175.418 kb on - strandat 175.464 kb on - strandat 175.479 kb on + strandat 175.479 kb on + strandat 175.507 kb on + strandat 175.520 kb on + strandat 175.520 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1
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173,103 + MPMX20_00166 0.43 -0.8
173,103 + MPMX20_00166 0.43 +0.3
173,111 - MPMX20_00166 0.44 +2.2
173,230 + MPMX20_00166 0.52 +1.2
173,255 - MPMX20_00166 0.54 -2.3
173,312 - MPMX20_00166 0.58 -0.8
173,340 - MPMX20_00166 0.60 +0.6
173,345 - MPMX20_00166 0.60 -2.6
173,361 + MPMX20_00166 0.61 -1.5
173,486 + MPMX20_00166 0.70 +0.4
173,486 + MPMX20_00166 0.70 -0.6
173,486 + MPMX20_00166 0.70 -0.8
173,554 + MPMX20_00166 0.74 +0.2
173,557 - MPMX20_00166 0.75 +0.7
173,587 - MPMX20_00166 0.77 +0.4
173,587 - MPMX20_00166 0.77 -0.0
173,598 + MPMX20_00166 0.77 +0.9
173,598 + MPMX20_00166 0.77 -1.1
173,609 + MPMX20_00166 0.78 -2.0
173,609 + MPMX20_00166 0.78 -1.2
173,617 - MPMX20_00166 0.79 +1.7
173,622 + MPMX20_00166 0.79 -1.0
173,640 - MPMX20_00166 0.80 -1.5
173,668 - MPMX20_00166 0.82 -0.2
173,732 + MPMX20_00166 0.87 +0.7
173,746 + MPMX20_00166 0.88 -1.4
173,746 + MPMX20_00166 0.88 +0.0
173,772 - MPMX20_00166 0.89 +0.6
173,820 + +0.6
173,834 + -2.1
173,874 + +0.1
173,945 + +2.6
173,946 + +0.5
173,979 - -0.1
174,000 + +2.2
174,000 + -1.7
174,002 + +0.7
174,112 + MPMX20_00167 0.15 +1.2
174,137 + MPMX20_00167 0.20 +2.9
174,137 + MPMX20_00167 0.20 +0.2
174,145 - MPMX20_00167 0.21 -0.6
174,197 - MPMX20_00167 0.31 +2.5
174,197 - MPMX20_00167 0.31 +1.9
174,197 - MPMX20_00167 0.31 +1.7
174,339 - MPMX20_00167 0.57 +1.1
174,339 - MPMX20_00167 0.57 +1.2
174,366 + MPMX20_00167 0.62 +0.6
174,366 + MPMX20_00167 0.62 +0.7
174,366 + MPMX20_00167 0.62 +2.9
174,366 + MPMX20_00167 0.62 +2.7
174,366 + MPMX20_00167 0.62 +2.5
174,392 + MPMX20_00167 0.67 +1.7
174,397 + MPMX20_00167 0.68 +5.9
174,405 - MPMX20_00167 0.69 +1.7
174,405 - MPMX20_00167 0.69 +3.5
174,407 + MPMX20_00167 0.70 -2.0
174,415 - MPMX20_00167 0.71 +2.0
174,415 - MPMX20_00167 0.71 +0.2
174,415 - MPMX20_00167 0.71 +0.8
174,415 - MPMX20_00167 0.71 +0.4
174,415 - MPMX20_00167 0.71 +0.5
174,422 - MPMX20_00167 0.73 +1.2
174,466 + MPMX20_00167 0.81 +2.9
174,564 + -1.3
174,624 - +2.1
174,635 - -0.6
174,670 + MPMX20_00168 0.11 +0.6
174,670 + MPMX20_00168 0.11 +1.6
174,715 + MPMX20_00168 0.16 +1.4
174,726 + MPMX20_00168 0.17 +0.2
174,734 - MPMX20_00168 0.18 -0.0
174,894 + MPMX20_00168 0.35 +0.2
174,902 - MPMX20_00168 0.36 +1.3
174,902 - MPMX20_00168 0.36 +1.6
174,902 - MPMX20_00168 0.36 +1.7
174,933 + MPMX20_00168 0.40 +0.9
174,943 + MPMX20_00168 0.41 +1.6
174,945 + MPMX20_00168 0.41 +2.2
174,951 - MPMX20_00168 0.41 +0.2
175,037 + MPMX20_00168 0.51 -0.4
175,045 - MPMX20_00168 0.52 +1.8
175,079 - MPMX20_00168 0.55 +1.5
175,079 - MPMX20_00168 0.55 -0.7
175,089 - MPMX20_00168 0.56 -0.3
175,155 + MPMX20_00168 0.64 +0.2
175,242 + MPMX20_00168 0.73 +0.7
175,259 + MPMX20_00168 0.75 +0.5
175,267 - MPMX20_00168 0.76 +1.7
175,267 - MPMX20_00168 0.76 +2.4
175,356 + MPMX20_00168 0.85 +3.2
175,356 + MPMX20_00168 0.85 +2.9
175,410 + +1.3
175,415 + +2.1
175,418 - +3.2
175,418 - +1.7
175,418 - +1.5
175,464 - +0.5
175,479 + -1.1
175,479 + -0.8
175,507 + +1.3
175,520 + -0.9
175,520 + +0.2

Or see this region's nucleotide sequence