Experiment: 1-octen-3-ol 0.6784116667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02270 and AZOBR_RS02275 are separated by 13 nucleotides AZOBR_RS02275 and AZOBR_RS02280 are separated by 16 nucleotides AZOBR_RS02280 and AZOBR_RS02285 are separated by 15 nucleotides
AZOBR_RS02270: AZOBR_RS02270 - histidine kinase, at 466,977 to 468,152
_RS02270
AZOBR_RS02275: AZOBR_RS02275 - aldo-keto reductase, at 468,166 to 469,209
_RS02275
AZOBR_RS02280: AZOBR_RS02280 - 2'-5' RNA ligase, at 469,226 to 469,762
_RS02280
AZOBR_RS02285: AZOBR_RS02285 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 469,778 to 471,028
_RS02285
Position (kb) 468
469
470 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 467.754 kb on + strand, within AZOBR_RS02270 at 467.800 kb on - strand, within AZOBR_RS02270 at 467.800 kb on - strand, within AZOBR_RS02270 at 467.983 kb on - strand, within AZOBR_RS02270 at 467.983 kb on - strand, within AZOBR_RS02270 at 467.983 kb on - strand, within AZOBR_RS02270 at 467.983 kb on - strand, within AZOBR_RS02270 at 468.117 kb on + strand at 468.118 kb on - strand at 468.159 kb on + strand at 468.159 kb on + strand at 468.160 kb on - strand at 468.277 kb on + strand, within AZOBR_RS02275 at 468.322 kb on + strand, within AZOBR_RS02275 at 468.322 kb on + strand, within AZOBR_RS02275 at 468.323 kb on - strand, within AZOBR_RS02275 at 468.323 kb on - strand, within AZOBR_RS02275 at 468.323 kb on - strand, within AZOBR_RS02275 at 468.323 kb on - strand, within AZOBR_RS02275 at 468.349 kb on + strand, within AZOBR_RS02275 at 468.350 kb on - strand, within AZOBR_RS02275 at 468.541 kb on + strand, within AZOBR_RS02275 at 468.541 kb on + strand, within AZOBR_RS02275 at 468.553 kb on + strand, within AZOBR_RS02275 at 468.604 kb on + strand, within AZOBR_RS02275 at 468.605 kb on - strand, within AZOBR_RS02275 at 468.605 kb on - strand, within AZOBR_RS02275 at 468.791 kb on - strand, within AZOBR_RS02275 at 468.902 kb on - strand, within AZOBR_RS02275 at 468.902 kb on - strand, within AZOBR_RS02275 at 468.997 kb on + strand, within AZOBR_RS02275 at 469.655 kb on - strand, within AZOBR_RS02280 at 469.697 kb on + strand, within AZOBR_RS02280 at 469.748 kb on + strand at 469.779 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6784116667 mM remove 467,754 + AZOBR_RS02270 0.66 +0.0 467,800 - AZOBR_RS02270 0.70 -0.5 467,800 - AZOBR_RS02270 0.70 +0.7 467,983 - AZOBR_RS02270 0.86 -0.4 467,983 - AZOBR_RS02270 0.86 -1.8 467,983 - AZOBR_RS02270 0.86 -0.1 467,983 - AZOBR_RS02270 0.86 -0.4 468,117 + -0.1 468,118 - -0.7 468,159 + +1.6 468,159 + +0.6 468,160 - -0.1 468,277 + AZOBR_RS02275 0.11 +0.6 468,322 + AZOBR_RS02275 0.15 -0.1 468,322 + AZOBR_RS02275 0.15 -0.5 468,323 - AZOBR_RS02275 0.15 +0.1 468,323 - AZOBR_RS02275 0.15 +0.6 468,323 - AZOBR_RS02275 0.15 -0.0 468,323 - AZOBR_RS02275 0.15 +1.1 468,349 + AZOBR_RS02275 0.18 +0.2 468,350 - AZOBR_RS02275 0.18 -0.7 468,541 + AZOBR_RS02275 0.36 +0.2 468,541 + AZOBR_RS02275 0.36 +0.7 468,553 + AZOBR_RS02275 0.37 +0.0 468,604 + AZOBR_RS02275 0.42 -3.0 468,605 - AZOBR_RS02275 0.42 -0.2 468,605 - AZOBR_RS02275 0.42 -0.6 468,791 - AZOBR_RS02275 0.60 -0.6 468,902 - AZOBR_RS02275 0.70 +0.4 468,902 - AZOBR_RS02275 0.70 +0.2 468,997 + AZOBR_RS02275 0.80 -1.0 469,655 - AZOBR_RS02280 0.80 -0.0 469,697 + AZOBR_RS02280 0.88 -0.2 469,748 + -0.9 469,779 + +0.0
Or see this region's nucleotide sequence