Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04311

Experiment: 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04310 and MPMX20_04311 are separated by 18 nucleotidesMPMX20_04311 and MPMX20_04312 overlap by 1 nucleotides MPMX20_04310: MPMX20_04310 - Maltodextrin phosphorylase, at 4,499,977 to 4,502,424 _04310 MPMX20_04311: MPMX20_04311 - Glycogen synthase, at 4,502,443 to 4,503,876 _04311 MPMX20_04312: MPMX20_04312 - Glucose-1-phosphate adenylyltransferase, at 4,503,876 to 4,505,171 _04312 Position (kb) 4502 4503 4504Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4501.455 kb on + strand, within MPMX20_04310at 4501.462 kb on - strand, within MPMX20_04310at 4501.526 kb on + strand, within MPMX20_04310at 4501.528 kb on + strand, within MPMX20_04310at 4501.537 kb on + strand, within MPMX20_04310at 4501.545 kb on - strand, within MPMX20_04310at 4501.559 kb on + strand, within MPMX20_04310at 4501.608 kb on + strand, within MPMX20_04310at 4501.616 kb on - strand, within MPMX20_04310at 4501.644 kb on + strand, within MPMX20_04310at 4501.711 kb on + strand, within MPMX20_04310at 4501.714 kb on - strand, within MPMX20_04310at 4501.731 kb on - strand, within MPMX20_04310at 4501.742 kb on - strand, within MPMX20_04310at 4501.811 kb on - strand, within MPMX20_04310at 4501.811 kb on - strand, within MPMX20_04310at 4501.908 kb on - strand, within MPMX20_04310at 4501.910 kb on - strand, within MPMX20_04310at 4501.967 kb on - strand, within MPMX20_04310at 4502.059 kb on + strand, within MPMX20_04310at 4502.062 kb on - strand, within MPMX20_04310at 4502.064 kb on + strand, within MPMX20_04310at 4502.101 kb on + strand, within MPMX20_04310at 4502.126 kb on + strand, within MPMX20_04310at 4502.170 kb on - strand, within MPMX20_04310at 4502.170 kb on - strand, within MPMX20_04310at 4502.170 kb on - strand, within MPMX20_04310at 4502.204 kb on + strandat 4502.261 kb on - strandat 4502.294 kb on + strandat 4502.360 kb on - strandat 4502.379 kb on + strandat 4502.476 kb on - strandat 4502.602 kb on - strand, within MPMX20_04311at 4502.649 kb on - strand, within MPMX20_04311at 4502.674 kb on - strand, within MPMX20_04311at 4502.674 kb on - strand, within MPMX20_04311at 4502.728 kb on - strand, within MPMX20_04311at 4502.730 kb on + strand, within MPMX20_04311at 4502.780 kb on - strand, within MPMX20_04311at 4502.780 kb on - strand, within MPMX20_04311at 4502.805 kb on - strand, within MPMX20_04311at 4502.828 kb on - strand, within MPMX20_04311at 4502.885 kb on - strand, within MPMX20_04311at 4502.899 kb on - strand, within MPMX20_04311at 4502.929 kb on + strand, within MPMX20_04311at 4503.015 kb on + strand, within MPMX20_04311at 4503.015 kb on + strand, within MPMX20_04311at 4503.023 kb on - strand, within MPMX20_04311at 4503.023 kb on - strand, within MPMX20_04311at 4503.149 kb on + strand, within MPMX20_04311at 4503.160 kb on + strand, within MPMX20_04311at 4503.244 kb on - strand, within MPMX20_04311at 4503.261 kb on - strand, within MPMX20_04311at 4503.263 kb on + strand, within MPMX20_04311at 4503.263 kb on + strand, within MPMX20_04311at 4503.306 kb on + strand, within MPMX20_04311at 4503.399 kb on - strand, within MPMX20_04311at 4503.474 kb on - strand, within MPMX20_04311at 4503.474 kb on - strand, within MPMX20_04311at 4503.483 kb on - strand, within MPMX20_04311at 4503.524 kb on + strand, within MPMX20_04311at 4503.527 kb on - strand, within MPMX20_04311at 4503.533 kb on + strand, within MPMX20_04311at 4503.533 kb on + strand, within MPMX20_04311at 4503.659 kb on + strand, within MPMX20_04311at 4503.681 kb on - strand, within MPMX20_04311at 4503.759 kb on + strandat 4503.767 kb on - strandat 4503.769 kb on + strandat 4503.769 kb on + strandat 4503.777 kb on - strandat 4503.784 kb on + strandat 4503.857 kb on - strandat 4503.886 kb on + strandat 4503.894 kb on - strandat 4503.946 kb on - strandat 4504.002 kb on - strandat 4504.039 kb on + strand, within MPMX20_04312at 4504.087 kb on + strand, within MPMX20_04312at 4504.131 kb on - strand, within MPMX20_04312at 4504.184 kb on + strand, within MPMX20_04312at 4504.217 kb on - strand, within MPMX20_04312at 4504.273 kb on + strand, within MPMX20_04312at 4504.303 kb on + strand, within MPMX20_04312at 4504.317 kb on - strand, within MPMX20_04312at 4504.327 kb on + strand, within MPMX20_04312at 4504.379 kb on + strand, within MPMX20_04312at 4504.382 kb on - strand, within MPMX20_04312at 4504.386 kb on + strand, within MPMX20_04312at 4504.394 kb on + strand, within MPMX20_04312at 4504.394 kb on - strand, within MPMX20_04312at 4504.403 kb on - strand, within MPMX20_04312at 4504.486 kb on + strand, within MPMX20_04312at 4504.486 kb on + strand, within MPMX20_04312at 4504.494 kb on - strand, within MPMX20_04312at 4504.715 kb on + strand, within MPMX20_04312at 4504.726 kb on - strand, within MPMX20_04312

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2
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4,501,455 + MPMX20_04310 0.60 +1.8
4,501,462 - MPMX20_04310 0.61 -0.5
4,501,526 + MPMX20_04310 0.63 +0.4
4,501,528 + MPMX20_04310 0.63 -0.4
4,501,537 + MPMX20_04310 0.64 -0.2
4,501,545 - MPMX20_04310 0.64 -0.7
4,501,559 + MPMX20_04310 0.65 -0.8
4,501,608 + MPMX20_04310 0.67 +2.2
4,501,616 - MPMX20_04310 0.67 +1.8
4,501,644 + MPMX20_04310 0.68 +0.5
4,501,711 + MPMX20_04310 0.71 -1.6
4,501,714 - MPMX20_04310 0.71 -0.0
4,501,731 - MPMX20_04310 0.72 +2.2
4,501,742 - MPMX20_04310 0.72 +0.4
4,501,811 - MPMX20_04310 0.75 +1.8
4,501,811 - MPMX20_04310 0.75 -0.4
4,501,908 - MPMX20_04310 0.79 +2.8
4,501,910 - MPMX20_04310 0.79 +0.1
4,501,967 - MPMX20_04310 0.81 -1.4
4,502,059 + MPMX20_04310 0.85 +0.4
4,502,062 - MPMX20_04310 0.85 -0.4
4,502,064 + MPMX20_04310 0.85 +0.3
4,502,101 + MPMX20_04310 0.87 +2.8
4,502,126 + MPMX20_04310 0.88 -0.3
4,502,170 - MPMX20_04310 0.90 -2.1
4,502,170 - MPMX20_04310 0.90 +0.8
4,502,170 - MPMX20_04310 0.90 -2.0
4,502,204 + -1.5
4,502,261 - -0.2
4,502,294 + +1.8
4,502,360 - -0.6
4,502,379 + -1.2
4,502,476 - -2.6
4,502,602 - MPMX20_04311 0.11 -0.6
4,502,649 - MPMX20_04311 0.14 -1.9
4,502,674 - MPMX20_04311 0.16 +0.4
4,502,674 - MPMX20_04311 0.16 -0.1
4,502,728 - MPMX20_04311 0.20 -1.1
4,502,730 + MPMX20_04311 0.20 -0.2
4,502,780 - MPMX20_04311 0.24 -0.8
4,502,780 - MPMX20_04311 0.24 -0.9
4,502,805 - MPMX20_04311 0.25 -0.9
4,502,828 - MPMX20_04311 0.27 -0.1
4,502,885 - MPMX20_04311 0.31 -2.6
4,502,899 - MPMX20_04311 0.32 +0.6
4,502,929 + MPMX20_04311 0.34 -0.7
4,503,015 + MPMX20_04311 0.40 -1.9
4,503,015 + MPMX20_04311 0.40 -0.7
4,503,023 - MPMX20_04311 0.40 +0.7
4,503,023 - MPMX20_04311 0.40 +0.0
4,503,149 + MPMX20_04311 0.49 +0.4
4,503,160 + MPMX20_04311 0.50 -0.9
4,503,244 - MPMX20_04311 0.56 -0.7
4,503,261 - MPMX20_04311 0.57 +0.2
4,503,263 + MPMX20_04311 0.57 -2.4
4,503,263 + MPMX20_04311 0.57 -3.1
4,503,306 + MPMX20_04311 0.60 -0.9
4,503,399 - MPMX20_04311 0.67 -1.8
4,503,474 - MPMX20_04311 0.72 -1.1
4,503,474 - MPMX20_04311 0.72 -0.8
4,503,483 - MPMX20_04311 0.73 -0.6
4,503,524 + MPMX20_04311 0.75 -1.0
4,503,527 - MPMX20_04311 0.76 -0.2
4,503,533 + MPMX20_04311 0.76 -2.3
4,503,533 + MPMX20_04311 0.76 -0.2
4,503,659 + MPMX20_04311 0.85 -0.7
4,503,681 - MPMX20_04311 0.86 -1.7
4,503,759 + -1.6
4,503,767 - -2.7
4,503,769 + -1.7
4,503,769 + -0.9
4,503,777 - +2.3
4,503,784 + +1.0
4,503,857 - -1.2
4,503,886 + +1.8
4,503,894 - -1.0
4,503,946 - +0.2
4,504,002 - -2.7
4,504,039 + MPMX20_04312 0.13 -1.4
4,504,087 + MPMX20_04312 0.16 -0.9
4,504,131 - MPMX20_04312 0.20 -2.4
4,504,184 + MPMX20_04312 0.24 -1.9
4,504,217 - MPMX20_04312 0.26 -0.9
4,504,273 + MPMX20_04312 0.31 -4.0
4,504,303 + MPMX20_04312 0.33 -1.1
4,504,317 - MPMX20_04312 0.34 -1.5
4,504,327 + MPMX20_04312 0.35 -1.2
4,504,379 + MPMX20_04312 0.39 -2.5
4,504,382 - MPMX20_04312 0.39 +0.2
4,504,386 + MPMX20_04312 0.39 +0.2
4,504,394 + MPMX20_04312 0.40 +0.4
4,504,394 - MPMX20_04312 0.40 -3.4
4,504,403 - MPMX20_04312 0.41 -0.7
4,504,486 + MPMX20_04312 0.47 -1.9
4,504,486 + MPMX20_04312 0.47 -2.1
4,504,494 - MPMX20_04312 0.48 -2.5
4,504,715 + MPMX20_04312 0.65 -0.0
4,504,726 - MPMX20_04312 0.66 -3.2

Or see this region's nucleotide sequence