Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00743

Experiment: 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00741 and MPMX20_00742 are separated by 105 nucleotidesMPMX20_00742 and MPMX20_00743 overlap by 8 nucleotidesMPMX20_00743 and MPMX20_00744 are separated by 114 nucleotidesMPMX20_00744 and MPMX20_00745 are separated by 39 nucleotides MPMX20_00741: MPMX20_00741 - putative lipoprotein YgdR, at 767,675 to 767,908 _00741 MPMX20_00742: MPMX20_00742 - Glutathione-regulated potassium-efflux system ancillary protein KefF, at 768,014 to 768,544 _00742 MPMX20_00743: MPMX20_00743 - Glutathione-regulated potassium-efflux system protein KefC, at 768,537 to 770,402 _00743 MPMX20_00744: MPMX20_00744 - IS1595 family transposase ISSsu9, at 770,517 to 770,996 _00744 MPMX20_00745: MPMX20_00745 - Bis(5'-nucleosyl)-tetraphosphatase, symmetrical, at 771,036 to 771,884 _00745 Position (kb) 768 769 770 771Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 767.553 kb on + strandat 767.588 kb on - strandat 767.607 kb on + strandat 767.638 kb on - strandat 767.653 kb on + strandat 767.661 kb on - strandat 767.661 kb on - strandat 767.671 kb on - strandat 767.673 kb on - strandat 767.697 kb on + strandat 767.705 kb on - strand, within MPMX20_00741at 767.723 kb on - strand, within MPMX20_00741at 767.729 kb on - strand, within MPMX20_00741at 767.806 kb on - strand, within MPMX20_00741at 767.853 kb on + strand, within MPMX20_00741at 767.858 kb on + strand, within MPMX20_00741at 767.858 kb on + strand, within MPMX20_00741at 767.861 kb on - strand, within MPMX20_00741at 767.863 kb on + strand, within MPMX20_00741at 767.863 kb on + strand, within MPMX20_00741at 767.863 kb on + strand, within MPMX20_00741at 767.868 kb on + strand, within MPMX20_00741at 767.871 kb on - strand, within MPMX20_00741at 767.876 kb on - strand, within MPMX20_00741at 767.876 kb on - strand, within MPMX20_00741at 767.876 kb on - strand, within MPMX20_00741at 767.876 kb on - strand, within MPMX20_00741at 767.878 kb on + strand, within MPMX20_00741at 767.878 kb on + strand, within MPMX20_00741at 767.878 kb on + strand, within MPMX20_00741at 767.878 kb on + strand, within MPMX20_00741at 767.878 kb on + strand, within MPMX20_00741at 767.878 kb on + strand, within MPMX20_00741at 767.878 kb on + strand, within MPMX20_00741at 767.878 kb on + strand, within MPMX20_00741at 767.878 kb on + strand, within MPMX20_00741at 767.886 kb on - strandat 767.907 kb on + strandat 767.908 kb on + strandat 767.945 kb on + strandat 767.945 kb on + strandat 767.945 kb on + strandat 767.945 kb on + strandat 767.945 kb on + strandat 767.945 kb on + strandat 767.945 kb on + strandat 767.953 kb on - strandat 768.060 kb on + strandat 768.072 kb on + strand, within MPMX20_00742at 768.082 kb on + strand, within MPMX20_00742at 768.082 kb on + strand, within MPMX20_00742at 768.082 kb on + strand, within MPMX20_00742at 768.090 kb on - strand, within MPMX20_00742at 768.167 kb on + strand, within MPMX20_00742at 768.214 kb on + strand, within MPMX20_00742at 768.214 kb on + strand, within MPMX20_00742at 768.217 kb on + strand, within MPMX20_00742at 768.222 kb on - strand, within MPMX20_00742at 768.222 kb on - strand, within MPMX20_00742at 768.222 kb on - strand, within MPMX20_00742at 768.222 kb on - strand, within MPMX20_00742at 768.227 kb on - strand, within MPMX20_00742at 768.230 kb on - strand, within MPMX20_00742at 768.313 kb on + strand, within MPMX20_00742at 768.380 kb on - strand, within MPMX20_00742at 768.380 kb on - strand, within MPMX20_00742at 768.409 kb on + strand, within MPMX20_00742at 768.414 kb on + strand, within MPMX20_00742at 768.419 kb on + strand, within MPMX20_00742at 768.422 kb on - strand, within MPMX20_00742at 768.427 kb on - strand, within MPMX20_00742at 768.451 kb on + strand, within MPMX20_00742at 768.544 kb on + strandat 768.552 kb on - strandat 768.552 kb on - strandat 768.566 kb on + strandat 768.590 kb on + strandat 768.618 kb on - strandat 768.627 kb on + strandat 768.632 kb on + strandat 768.635 kb on - strandat 768.745 kb on - strand, within MPMX20_00743at 768.755 kb on + strand, within MPMX20_00743at 768.780 kb on - strand, within MPMX20_00743at 768.787 kb on + strand, within MPMX20_00743at 768.815 kb on - strand, within MPMX20_00743at 768.831 kb on - strand, within MPMX20_00743at 768.890 kb on - strand, within MPMX20_00743at 768.951 kb on - strand, within MPMX20_00743at 768.979 kb on + strand, within MPMX20_00743at 769.181 kb on + strand, within MPMX20_00743at 769.222 kb on + strand, within MPMX20_00743at 769.289 kb on - strand, within MPMX20_00743at 769.297 kb on + strand, within MPMX20_00743at 769.297 kb on + strand, within MPMX20_00743at 769.297 kb on + strand, within MPMX20_00743at 769.297 kb on + strand, within MPMX20_00743at 769.297 kb on + strand, within MPMX20_00743at 769.297 kb on - strand, within MPMX20_00743at 769.305 kb on - strand, within MPMX20_00743at 769.305 kb on - strand, within MPMX20_00743at 769.305 kb on - strand, within MPMX20_00743at 769.372 kb on + strand, within MPMX20_00743at 769.380 kb on - strand, within MPMX20_00743at 769.486 kb on + strand, within MPMX20_00743at 769.506 kb on - strand, within MPMX20_00743at 769.594 kb on - strand, within MPMX20_00743at 769.642 kb on - strand, within MPMX20_00743at 769.723 kb on + strand, within MPMX20_00743at 769.816 kb on + strand, within MPMX20_00743at 769.838 kb on + strand, within MPMX20_00743at 769.839 kb on + strand, within MPMX20_00743at 769.847 kb on - strand, within MPMX20_00743at 769.899 kb on + strand, within MPMX20_00743at 769.944 kb on + strand, within MPMX20_00743at 769.999 kb on + strand, within MPMX20_00743at 769.999 kb on + strand, within MPMX20_00743at 770.007 kb on - strand, within MPMX20_00743at 770.067 kb on - strand, within MPMX20_00743at 770.073 kb on - strand, within MPMX20_00743at 770.098 kb on - strand, within MPMX20_00743at 770.102 kb on + strand, within MPMX20_00743at 770.199 kb on + strand, within MPMX20_00743at 770.215 kb on - strand, within MPMX20_00743at 770.319 kb on - strandat 770.346 kb on - strandat 770.456 kb on - strandat 771.024 kb on + strandat 771.123 kb on + strand, within MPMX20_00745at 771.123 kb on + strand, within MPMX20_00745at 771.123 kb on + strand, within MPMX20_00745at 771.131 kb on - strand, within MPMX20_00745at 771.131 kb on - strand, within MPMX20_00745at 771.178 kb on - strand, within MPMX20_00745at 771.234 kb on - strand, within MPMX20_00745at 771.372 kb on + strand, within MPMX20_00745at 771.380 kb on - strand, within MPMX20_00745

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2
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767,553 + +0.5
767,588 - -1.8
767,607 + -2.2
767,638 - +0.1
767,653 + +1.8
767,661 - +0.1
767,661 - -0.0
767,671 - -2.8
767,673 - +1.2
767,697 + +0.2
767,705 - MPMX20_00741 0.13 -0.8
767,723 - MPMX20_00741 0.21 -1.4
767,729 - MPMX20_00741 0.23 -0.4
767,806 - MPMX20_00741 0.56 -0.0
767,853 + MPMX20_00741 0.76 -1.2
767,858 + MPMX20_00741 0.78 -1.1
767,858 + MPMX20_00741 0.78 +1.2
767,861 - MPMX20_00741 0.79 +0.7
767,863 + MPMX20_00741 0.80 -0.2
767,863 + MPMX20_00741 0.80 -2.0
767,863 + MPMX20_00741 0.80 -1.9
767,868 + MPMX20_00741 0.82 +1.2
767,871 - MPMX20_00741 0.84 -1.0
767,876 - MPMX20_00741 0.86 -1.5
767,876 - MPMX20_00741 0.86 +0.5
767,876 - MPMX20_00741 0.86 -1.5
767,876 - MPMX20_00741 0.86 +0.0
767,878 + MPMX20_00741 0.87 -0.9
767,878 + MPMX20_00741 0.87 +0.5
767,878 + MPMX20_00741 0.87 +2.2
767,878 + MPMX20_00741 0.87 +2.2
767,878 + MPMX20_00741 0.87 +0.7
767,878 + MPMX20_00741 0.87 -0.7
767,878 + MPMX20_00741 0.87 -0.9
767,878 + MPMX20_00741 0.87 -0.5
767,878 + MPMX20_00741 0.87 +0.5
767,886 - +0.8
767,907 + -1.0
767,908 + -0.3
767,945 + +0.7
767,945 + -2.3
767,945 + +1.3
767,945 + -0.1
767,945 + -0.5
767,945 + -0.8
767,945 + -0.4
767,953 - +1.0
768,060 + -1.0
768,072 + MPMX20_00742 0.11 +1.2
768,082 + MPMX20_00742 0.13 +0.2
768,082 + MPMX20_00742 0.13 -1.9
768,082 + MPMX20_00742 0.13 +0.8
768,090 - MPMX20_00742 0.14 +0.9
768,167 + MPMX20_00742 0.29 -1.5
768,214 + MPMX20_00742 0.38 +0.5
768,214 + MPMX20_00742 0.38 +2.1
768,217 + MPMX20_00742 0.38 +0.2
768,222 - MPMX20_00742 0.39 -0.5
768,222 - MPMX20_00742 0.39 +0.4
768,222 - MPMX20_00742 0.39 +0.2
768,222 - MPMX20_00742 0.39 -1.3
768,227 - MPMX20_00742 0.40 +0.5
768,230 - MPMX20_00742 0.41 -1.5
768,313 + MPMX20_00742 0.56 +1.2
768,380 - MPMX20_00742 0.69 -0.8
768,380 - MPMX20_00742 0.69 +0.6
768,409 + MPMX20_00742 0.74 -0.0
768,414 + MPMX20_00742 0.75 +0.0
768,419 + MPMX20_00742 0.76 -0.6
768,422 - MPMX20_00742 0.77 -1.7
768,427 - MPMX20_00742 0.78 -2.3
768,451 + MPMX20_00742 0.82 +0.1
768,544 + -1.7
768,552 - +0.5
768,552 - -1.2
768,566 + -0.7
768,590 + +1.2
768,618 - +0.6
768,627 + +1.4
768,632 + +0.3
768,635 - +1.5
768,745 - MPMX20_00743 0.11 -0.9
768,755 + MPMX20_00743 0.12 -1.2
768,780 - MPMX20_00743 0.13 +2.2
768,787 + MPMX20_00743 0.13 +0.2
768,815 - MPMX20_00743 0.15 +0.6
768,831 - MPMX20_00743 0.16 -1.1
768,890 - MPMX20_00743 0.19 +1.5
768,951 - MPMX20_00743 0.22 +1.8
768,979 + MPMX20_00743 0.24 -2.2
769,181 + MPMX20_00743 0.35 -0.3
769,222 + MPMX20_00743 0.37 -1.5
769,289 - MPMX20_00743 0.40 +0.2
769,297 + MPMX20_00743 0.41 -0.2
769,297 + MPMX20_00743 0.41 +0.8
769,297 + MPMX20_00743 0.41 -0.5
769,297 + MPMX20_00743 0.41 -0.4
769,297 + MPMX20_00743 0.41 -1.2
769,297 - MPMX20_00743 0.41 +1.5
769,305 - MPMX20_00743 0.41 -1.0
769,305 - MPMX20_00743 0.41 +2.8
769,305 - MPMX20_00743 0.41 -0.4
769,372 + MPMX20_00743 0.45 -0.9
769,380 - MPMX20_00743 0.45 -0.8
769,486 + MPMX20_00743 0.51 -2.6
769,506 - MPMX20_00743 0.52 +1.8
769,594 - MPMX20_00743 0.57 -2.4
769,642 - MPMX20_00743 0.59 -2.3
769,723 + MPMX20_00743 0.64 -0.7
769,816 + MPMX20_00743 0.69 +1.2
769,838 + MPMX20_00743 0.70 -1.1
769,839 + MPMX20_00743 0.70 -0.7
769,847 - MPMX20_00743 0.70 -2.1
769,899 + MPMX20_00743 0.73 -0.9
769,944 + MPMX20_00743 0.75 -1.6
769,999 + MPMX20_00743 0.78 +0.3
769,999 + MPMX20_00743 0.78 -1.1
770,007 - MPMX20_00743 0.79 -0.9
770,067 - MPMX20_00743 0.82 -0.6
770,073 - MPMX20_00743 0.82 +0.5
770,098 - MPMX20_00743 0.84 -0.7
770,102 + MPMX20_00743 0.84 +0.2
770,199 + MPMX20_00743 0.89 -0.0
770,215 - MPMX20_00743 0.90 -0.2
770,319 - +0.5
770,346 - -0.2
770,456 - +1.2
771,024 + -0.5
771,123 + MPMX20_00745 0.10 +1.8
771,123 + MPMX20_00745 0.10 -0.9
771,123 + MPMX20_00745 0.10 -1.7
771,131 - MPMX20_00745 0.11 +1.2
771,131 - MPMX20_00745 0.11 +0.8
771,178 - MPMX20_00745 0.17 -0.8
771,234 - MPMX20_00745 0.23 -0.0
771,372 + MPMX20_00745 0.40 +0.8
771,380 - MPMX20_00745 0.41 +0.2

Or see this region's nucleotide sequence