Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00652

Experiment: 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00650 and MPMX20_00651 are separated by 85 nucleotidesMPMX20_00651 and MPMX20_00652 overlap by 4 nucleotidesMPMX20_00652 and MPMX20_00653 are separated by 148 nucleotidesMPMX20_00653 and MPMX20_00654 are separated by 84 nucleotides MPMX20_00650: MPMX20_00650 - hypothetical protein, at 676,592 to 677,074 _00650 MPMX20_00651: MPMX20_00651 - DNA replication protein DnaC, at 677,160 to 677,897 _00651 MPMX20_00652: MPMX20_00652 - Primosomal protein 1, at 677,894 to 678,439 _00652 MPMX20_00653: MPMX20_00653 - Organic hydroperoxide resistance protein OhrB, at 678,588 to 679,016 _00653 MPMX20_00654: MPMX20_00654 - Organic hydroperoxide resistance transcriptional regulator, at 679,101 to 679,553 _00654 Position (kb) 677 678 679Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 677.004 kb on + strand, within MPMX20_00650at 677.039 kb on + strandat 677.049 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.121 kb on + strandat 677.129 kb on - strandat 677.129 kb on - strandat 677.129 kb on - strandat 677.129 kb on - strandat 677.129 kb on - strandat 677.129 kb on - strandat 677.129 kb on - strandat 677.129 kb on - strandat 678.444 kb on - strandat 678.444 kb on - strandat 678.444 kb on - strandat 678.450 kb on - strandat 678.460 kb on - strandat 678.482 kb on + strandat 678.482 kb on + strandat 678.514 kb on - strandat 678.522 kb on - strandat 678.574 kb on - strandat 678.656 kb on + strand, within MPMX20_00653at 678.757 kb on - strand, within MPMX20_00653at 678.847 kb on - strand, within MPMX20_00653at 678.856 kb on + strand, within MPMX20_00653at 678.861 kb on - strand, within MPMX20_00653at 678.866 kb on + strand, within MPMX20_00653at 678.871 kb on + strand, within MPMX20_00653at 678.871 kb on + strand, within MPMX20_00653at 678.874 kb on - strand, within MPMX20_00653at 678.874 kb on - strand, within MPMX20_00653at 678.874 kb on - strand, within MPMX20_00653at 678.879 kb on - strand, within MPMX20_00653at 678.928 kb on - strand, within MPMX20_00653at 679.049 kb on + strandat 679.091 kb on + strandat 679.093 kb on + strandat 679.101 kb on - strandat 679.129 kb on + strandat 679.150 kb on - strand, within MPMX20_00654at 679.165 kb on + strand, within MPMX20_00654at 679.165 kb on + strand, within MPMX20_00654at 679.165 kb on + strand, within MPMX20_00654at 679.171 kb on - strand, within MPMX20_00654at 679.173 kb on - strand, within MPMX20_00654at 679.173 kb on - strand, within MPMX20_00654at 679.244 kb on + strand, within MPMX20_00654at 679.244 kb on + strand, within MPMX20_00654at 679.250 kb on + strand, within MPMX20_00654at 679.252 kb on - strand, within MPMX20_00654at 679.252 kb on - strand, within MPMX20_00654at 679.320 kb on - strand, within MPMX20_00654at 679.373 kb on + strand, within MPMX20_00654at 679.381 kb on - strand, within MPMX20_00654at 679.381 kb on - strand, within MPMX20_00654at 679.393 kb on + strand, within MPMX20_00654

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2
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677,004 + MPMX20_00650 0.85 -0.8
677,039 + +0.0
677,049 + -2.0
677,121 + -0.7
677,121 + -0.4
677,121 + -0.8
677,121 + -1.6
677,121 + +2.8
677,121 + +0.1
677,121 + +3.2
677,121 + +0.3
677,121 + -0.9
677,121 + -1.8
677,121 + -2.2
677,121 + -0.1
677,121 + +1.2
677,121 + +0.8
677,121 + -0.4
677,121 + +1.8
677,121 + -0.5
677,121 + +1.2
677,129 - -0.5
677,129 - -1.8
677,129 - +0.5
677,129 - -1.3
677,129 - -1.1
677,129 - +0.1
677,129 - +0.2
677,129 - +0.3
678,444 - +0.2
678,444 - +0.2
678,444 - +0.1
678,450 - -2.2
678,460 - +1.2
678,482 + +0.2
678,482 + +1.2
678,514 - +0.5
678,522 - +0.8
678,574 - -1.9
678,656 + MPMX20_00653 0.16 -0.4
678,757 - MPMX20_00653 0.39 +2.4
678,847 - MPMX20_00653 0.60 -1.5
678,856 + MPMX20_00653 0.62 +1.2
678,861 - MPMX20_00653 0.64 -2.7
678,866 + MPMX20_00653 0.65 -2.2
678,871 + MPMX20_00653 0.66 +0.2
678,871 + MPMX20_00653 0.66 -0.6
678,874 - MPMX20_00653 0.67 +1.5
678,874 - MPMX20_00653 0.67 -0.6
678,874 - MPMX20_00653 0.67 -0.2
678,879 - MPMX20_00653 0.68 +0.6
678,928 - MPMX20_00653 0.79 +0.0
679,049 + +0.8
679,091 + +1.1
679,093 + +0.8
679,101 - -0.8
679,129 + +0.9
679,150 - MPMX20_00654 0.11 -0.5
679,165 + MPMX20_00654 0.14 +0.2
679,165 + MPMX20_00654 0.14 -1.5
679,165 + MPMX20_00654 0.14 +1.2
679,171 - MPMX20_00654 0.15 -0.7
679,173 - MPMX20_00654 0.16 +0.8
679,173 - MPMX20_00654 0.16 -1.2
679,244 + MPMX20_00654 0.32 -0.0
679,244 + MPMX20_00654 0.32 -0.0
679,250 + MPMX20_00654 0.33 +1.2
679,252 - MPMX20_00654 0.33 +1.8
679,252 - MPMX20_00654 0.33 +0.2
679,320 - MPMX20_00654 0.48 -0.3
679,373 + MPMX20_00654 0.60 -1.3
679,381 - MPMX20_00654 0.62 -1.4
679,381 - MPMX20_00654 0.62 -2.8
679,393 + MPMX20_00654 0.64 -0.2

Or see this region's nucleotide sequence