Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03145

Experiment: 0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03144 and MPMX20_03145 overlap by 1 nucleotidesMPMX20_03145 and MPMX20_03146 are separated by 1 nucleotides MPMX20_03144: MPMX20_03144 - Inner membrane ABC transporter permease protein YejB, at 3,305,658 to 3,306,752 _03144 MPMX20_03145: MPMX20_03145 - Inner membrane ABC transporter permease protein YejE, at 3,306,752 to 3,307,777 _03145 MPMX20_03146: MPMX20_03146 - putative ABC transporter ATP-binding protein YejF, at 3,307,779 to 3,309,368 _03146 Position (kb) 3306 3307 3308Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3305.807 kb on + strand, within MPMX20_03144at 3305.984 kb on - strand, within MPMX20_03144at 3306.070 kb on + strand, within MPMX20_03144at 3306.070 kb on + strand, within MPMX20_03144at 3306.072 kb on - strand, within MPMX20_03144at 3306.072 kb on - strand, within MPMX20_03144at 3306.078 kb on - strand, within MPMX20_03144at 3306.078 kb on - strand, within MPMX20_03144at 3306.078 kb on - strand, within MPMX20_03144at 3306.078 kb on - strand, within MPMX20_03144at 3306.125 kb on + strand, within MPMX20_03144at 3306.143 kb on - strand, within MPMX20_03144at 3306.159 kb on + strand, within MPMX20_03144at 3306.159 kb on + strand, within MPMX20_03144at 3306.167 kb on - strand, within MPMX20_03144at 3306.167 kb on - strand, within MPMX20_03144at 3306.277 kb on - strand, within MPMX20_03144at 3306.310 kb on - strand, within MPMX20_03144at 3306.442 kb on - strand, within MPMX20_03144at 3306.507 kb on - strand, within MPMX20_03144at 3306.509 kb on + strand, within MPMX20_03144at 3306.575 kb on + strand, within MPMX20_03144at 3306.657 kb on + strandat 3306.657 kb on + strandat 3306.665 kb on - strandat 3306.665 kb on - strandat 3306.665 kb on - strandat 3306.665 kb on - strandat 3306.665 kb on - strandat 3306.665 kb on - strandat 3306.717 kb on - strandat 3306.717 kb on - strandat 3306.869 kb on - strand, within MPMX20_03145at 3306.924 kb on - strand, within MPMX20_03145at 3307.016 kb on - strand, within MPMX20_03145at 3307.031 kb on - strand, within MPMX20_03145at 3307.127 kb on + strand, within MPMX20_03145at 3307.159 kb on + strand, within MPMX20_03145at 3307.241 kb on + strand, within MPMX20_03145at 3307.246 kb on + strand, within MPMX20_03145at 3307.379 kb on + strand, within MPMX20_03145at 3307.461 kb on + strand, within MPMX20_03145at 3307.463 kb on + strand, within MPMX20_03145at 3307.463 kb on + strand, within MPMX20_03145at 3307.463 kb on + strand, within MPMX20_03145at 3307.463 kb on + strand, within MPMX20_03145at 3307.471 kb on - strand, within MPMX20_03145at 3307.521 kb on - strand, within MPMX20_03145at 3307.563 kb on + strand, within MPMX20_03145at 3307.605 kb on + strand, within MPMX20_03145at 3307.632 kb on + strand, within MPMX20_03145at 3307.780 kb on - strandat 3307.798 kb on + strandat 3307.800 kb on + strandat 3307.832 kb on + strandat 3307.890 kb on - strandat 3307.890 kb on - strandat 3308.089 kb on + strand, within MPMX20_03146at 3308.089 kb on + strand, within MPMX20_03146at 3308.089 kb on + strand, within MPMX20_03146at 3308.089 kb on + strand, within MPMX20_03146at 3308.097 kb on - strand, within MPMX20_03146at 3308.097 kb on - strand, within MPMX20_03146at 3308.097 kb on - strand, within MPMX20_03146at 3308.097 kb on - strand, within MPMX20_03146at 3308.097 kb on - strand, within MPMX20_03146at 3308.302 kb on + strand, within MPMX20_03146at 3308.324 kb on + strand, within MPMX20_03146at 3308.332 kb on - strand, within MPMX20_03146at 3308.403 kb on + strand, within MPMX20_03146at 3308.538 kb on - strand, within MPMX20_03146at 3308.538 kb on - strand, within MPMX20_03146at 3308.558 kb on + strand, within MPMX20_03146at 3308.735 kb on - strand, within MPMX20_03146at 3308.764 kb on + strand, within MPMX20_03146at 3308.766 kb on - strand, within MPMX20_03146at 3308.772 kb on + strand, within MPMX20_03146at 3308.772 kb on - strand, within MPMX20_03146

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2
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3,305,807 + MPMX20_03144 0.14 -0.1
3,305,984 - MPMX20_03144 0.30 -0.4
3,306,070 + MPMX20_03144 0.38 -0.9
3,306,070 + MPMX20_03144 0.38 +0.4
3,306,072 - MPMX20_03144 0.38 +3.1
3,306,072 - MPMX20_03144 0.38 -1.6
3,306,078 - MPMX20_03144 0.38 -0.3
3,306,078 - MPMX20_03144 0.38 +0.4
3,306,078 - MPMX20_03144 0.38 -0.9
3,306,078 - MPMX20_03144 0.38 -2.2
3,306,125 + MPMX20_03144 0.43 -0.6
3,306,143 - MPMX20_03144 0.44 +1.5
3,306,159 + MPMX20_03144 0.46 +0.6
3,306,159 + MPMX20_03144 0.46 -0.9
3,306,167 - MPMX20_03144 0.46 -1.8
3,306,167 - MPMX20_03144 0.46 +0.1
3,306,277 - MPMX20_03144 0.57 +0.1
3,306,310 - MPMX20_03144 0.60 -0.3
3,306,442 - MPMX20_03144 0.72 -0.1
3,306,507 - MPMX20_03144 0.78 +0.1
3,306,509 + MPMX20_03144 0.78 -2.1
3,306,575 + MPMX20_03144 0.84 -1.1
3,306,657 + -0.8
3,306,657 + +0.2
3,306,665 - -1.4
3,306,665 - -0.7
3,306,665 - -0.3
3,306,665 - +0.1
3,306,665 - +2.9
3,306,665 - +3.1
3,306,717 - -0.9
3,306,717 - -0.3
3,306,869 - MPMX20_03145 0.11 -3.0
3,306,924 - MPMX20_03145 0.17 -2.4
3,307,016 - MPMX20_03145 0.26 +0.8
3,307,031 - MPMX20_03145 0.27 +1.0
3,307,127 + MPMX20_03145 0.37 -1.2
3,307,159 + MPMX20_03145 0.40 +0.5
3,307,241 + MPMX20_03145 0.48 +0.5
3,307,246 + MPMX20_03145 0.48 +0.9
3,307,379 + MPMX20_03145 0.61 +1.8
3,307,461 + MPMX20_03145 0.69 -2.1
3,307,463 + MPMX20_03145 0.69 -1.6
3,307,463 + MPMX20_03145 0.69 -0.3
3,307,463 + MPMX20_03145 0.69 +0.1
3,307,463 + MPMX20_03145 0.69 -0.1
3,307,471 - MPMX20_03145 0.70 -0.8
3,307,521 - MPMX20_03145 0.75 +1.7
3,307,563 + MPMX20_03145 0.79 -0.8
3,307,605 + MPMX20_03145 0.83 -0.7
3,307,632 + MPMX20_03145 0.86 -0.1
3,307,780 - +2.5
3,307,798 + -1.4
3,307,800 + +1.1
3,307,832 + +0.3
3,307,890 - -3.1
3,307,890 - -0.1
3,308,089 + MPMX20_03146 0.19 -0.6
3,308,089 + MPMX20_03146 0.19 -0.7
3,308,089 + MPMX20_03146 0.19 -0.4
3,308,089 + MPMX20_03146 0.19 -0.8
3,308,097 - MPMX20_03146 0.20 -1.1
3,308,097 - MPMX20_03146 0.20 +0.7
3,308,097 - MPMX20_03146 0.20 -0.9
3,308,097 - MPMX20_03146 0.20 -1.2
3,308,097 - MPMX20_03146 0.20 -1.3
3,308,302 + MPMX20_03146 0.33 -0.8
3,308,324 + MPMX20_03146 0.34 +1.5
3,308,332 - MPMX20_03146 0.35 +0.8
3,308,403 + MPMX20_03146 0.39 +0.7
3,308,538 - MPMX20_03146 0.48 +0.0
3,308,538 - MPMX20_03146 0.48 -1.0
3,308,558 + MPMX20_03146 0.49 +1.1
3,308,735 - MPMX20_03146 0.60 -1.1
3,308,764 + MPMX20_03146 0.62 +2.6
3,308,766 - MPMX20_03146 0.62 -0.8
3,308,772 + MPMX20_03146 0.62 +0.3
3,308,772 - MPMX20_03146 0.62 +0.0

Or see this region's nucleotide sequence