Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03972

Experiment: TSB plate, 1:1 coculture with Enterobacter ludwigii PH2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB plate, 1:1 coculture with Enterobacter ludwigii PH2
4,166,012	+		MPMX20_03969	0.52	-0.6
4,166,046	+		MPMX20_03969	0.67	-1.1
4,166,046	+		MPMX20_03969	0.67	+2.4
4,166,051	+		MPMX20_03969	0.69	+1.2
4,166,054	-		MPMX20_03969	0.71	-0.8
4,166,069	-		MPMX20_03969	0.77	-1.5
4,166,114	+				-0.2
4,166,153	+		MPMX20_03970	0.22	-0.2
4,166,229	+		MPMX20_03970	0.59	-1.9
4,166,240	+		MPMX20_03970	0.64	+1.6
4,166,240	+		MPMX20_03970	0.64	+1.0
4,166,240	+		MPMX20_03970	0.64	-0.8
4,166,240	+		MPMX20_03970	0.64	+0.6
4,166,240	+		MPMX20_03970	0.64	+0.4
4,166,248	-		MPMX20_03970	0.68	+0.2
4,166,248	-		MPMX20_03970	0.68	+2.0
4,166,284	-		MPMX20_03970	0.86	+0.7
4,166,284	-		MPMX20_03970	0.86	-0.6
4,166,289	+		MPMX20_03970	0.88	+0.4
4,166,289	+		MPMX20_03970	0.88	+0.5
4,166,377	-				-0.8
4,166,379	+				-0.8
4,166,406	+				-2.1
4,166,413	-				+1.0
4,166,422	+				+0.9
4,166,443	-				+0.6
4,166,445	+				+0.0
4,166,473	+				+0.6
4,166,481	-		MPMX20_03971	0.10	-0.0
4,166,529	+		MPMX20_03971	0.21	-0.0
4,166,575	+		MPMX20_03971	0.32	-1.4
4,166,632	+		MPMX20_03971	0.44	+0.2
4,166,632	+		MPMX20_03971	0.44	+0.2
4,166,638	+		MPMX20_03971	0.46	-0.0
4,166,646	-		MPMX20_03971	0.48	-0.8
4,166,646	-		MPMX20_03971	0.48	+1.0
4,166,646	-		MPMX20_03971	0.48	-1.4
4,166,646	-		MPMX20_03971	0.48	-0.3
4,166,656	-		MPMX20_03971	0.50	-0.3
4,166,656	-		MPMX20_03971	0.50	-0.7
4,166,656	-		MPMX20_03971	0.50	-2.7
4,166,810	-		MPMX20_03971	0.85	+0.1
4,166,812	+		MPMX20_03971	0.85	-0.4
4,166,812	+		MPMX20_03971	0.85	+0.6
4,166,812	+		MPMX20_03971	0.85	-1.1
4,166,820	-		MPMX20_03971	0.87	+1.1
4,166,820	-		MPMX20_03971	0.87	+0.7
4,166,820	-		MPMX20_03971	0.87	-0.6
4,166,820	-		MPMX20_03971	0.87	-0.3
4,166,859	+				-0.1
4,166,932	-				-0.0
4,166,945	+				+1.0
4,167,014	+				+2.4
4,167,152	+				-0.8
4,167,194	-				+0.4
4,167,271	-		MPMX20_03972	0.13	-0.9
4,167,273	+		MPMX20_03972	0.13	+0.6
4,167,276	-		MPMX20_03972	0.13	-1.9
4,167,281	-		MPMX20_03972	0.13	+0.1
4,167,343	+		MPMX20_03972	0.16	-0.9
4,167,343	+		MPMX20_03972	0.16	+1.3
4,167,354	-		MPMX20_03972	0.17	-2.2
4,167,427	-		MPMX20_03972	0.20	+0.6
4,167,429	+		MPMX20_03972	0.20	+1.6
4,167,480	-		MPMX20_03972	0.22	+0.2
4,167,530	+		MPMX20_03972	0.25	-0.0
4,167,530	+		MPMX20_03972	0.25	+1.3
4,167,530	+		MPMX20_03972	0.25	-1.3
4,167,557	-		MPMX20_03972	0.26	-0.1
4,167,592	+		MPMX20_03972	0.28	+3.6
4,167,597	+		MPMX20_03972	0.28	+1.6
4,167,600	-		MPMX20_03972	0.28	+0.6
4,167,605	-		MPMX20_03972	0.28	-0.2
4,167,610	-		MPMX20_03972	0.28	-0.8
4,167,625	+		MPMX20_03972	0.29	-3.0
4,167,650	+		MPMX20_03972	0.30	+0.8
4,167,690	+		MPMX20_03972	0.32	+0.3
4,167,690	+		MPMX20_03972	0.32	+1.0
4,167,690	+		MPMX20_03972	0.32	+0.2
4,167,690	+		MPMX20_03972	0.32	-0.9
4,167,698	-		MPMX20_03972	0.32	-0.3
4,167,711	-		MPMX20_03972	0.33	-0.9
4,167,716	-		MPMX20_03972	0.33	-0.9
4,167,755	+		MPMX20_03972	0.35	-1.2
4,167,763	-		MPMX20_03972	0.35	+1.2
4,167,768	-		MPMX20_03972	0.36	+0.1
4,167,825	+		MPMX20_03972	0.38	-1.2
4,167,927	+		MPMX20_03972	0.43	-1.1
4,167,928	-		MPMX20_03972	0.43	-0.7
4,167,950	-		MPMX20_03972	0.44	-2.7
4,167,965	+		MPMX20_03972	0.45	+2.2
4,168,062	-		MPMX20_03972	0.49	+1.8
4,168,192	+		MPMX20_03972	0.55	-0.2
4,168,192	+		MPMX20_03972	0.55	+0.6
4,168,200	-		MPMX20_03972	0.55	+0.8
4,168,200	-		MPMX20_03972	0.55	-1.4
4,168,200	-		MPMX20_03972	0.55	-1.7
4,168,200	-		MPMX20_03972	0.55	-0.2
4,168,229	+		MPMX20_03972	0.57	+1.8
4,168,237	-		MPMX20_03972	0.57	-0.6
4,168,237	-		MPMX20_03972	0.57	+0.0
4,168,237	-		MPMX20_03972	0.57	-1.8
4,168,249	+		MPMX20_03972	0.58	+1.0
4,168,254	+		MPMX20_03972	0.58	+0.8
4,168,255	-		MPMX20_03972	0.58	-0.1
4,168,288	+		MPMX20_03972	0.59	-1.2
4,168,288	+		MPMX20_03972	0.59	-1.3
4,168,350	+		MPMX20_03972	0.62	-0.1
4,168,350	+		MPMX20_03972	0.62	-1.4
4,168,380	+		MPMX20_03972	0.63	+0.0
4,168,388	-		MPMX20_03972	0.64	-1.6
4,168,439	-		MPMX20_03972	0.66	+1.6
4,168,494	+		MPMX20_03972	0.69	+0.4
4,168,500	-		MPMX20_03972	0.69	+1.6
4,168,505	+		MPMX20_03972	0.69	+0.2
4,168,507	-		MPMX20_03972	0.69	-2.0
4,168,621	+		MPMX20_03972	0.74	+2.6
4,168,629	-		MPMX20_03972	0.75	-1.0
4,168,651	+		MPMX20_03972	0.76	-2.3
4,168,678	-		MPMX20_03972	0.77	+0.2
4,168,685	-		MPMX20_03972	0.77	+3.0
4,168,775	+		MPMX20_03972	0.81	-0.0
4,168,780	+		MPMX20_03972	0.82	-1.2
4,168,780	+		MPMX20_03972	0.82	+1.0
4,168,788	-		MPMX20_03972	0.82	-1.2
4,168,820	+		MPMX20_03972	0.84	+0.2
4,168,863	-		MPMX20_03972	0.85	-1.0
4,168,880	+		MPMX20_03972	0.86	+1.3
4,168,899	+		MPMX20_03972	0.87	-1.2
4,168,899	+		MPMX20_03972	0.87	-0.3
4,168,902	-		MPMX20_03972	0.87	+5.4
4,168,909	-		MPMX20_03972	0.88	+0.5
4,168,941	+		MPMX20_03972	0.89	-0.0
4,168,949	-		MPMX20_03972	0.89	-0.0
4,168,949	-		MPMX20_03972	0.89	+0.2
4,168,949	-		MPMX20_03972	0.89	-0.1
4,168,973	+				+1.0
4,168,990	+				+0.4
4,169,042	+				-1.0
4,169,127	+				+1.0
4,169,135	-				-0.2
4,169,135	-				-0.8
4,169,135	-				+1.3
4,169,137	+				-0.8
4,169,230	+		MPMX20_03973	0.18	-0.7
4,169,254	+		MPMX20_03973	0.29	-1.3
4,169,262	-		MPMX20_03973	0.33	+1.1
4,169,266	-		MPMX20_03973	0.35	-1.1
4,169,278	+		MPMX20_03973	0.40	-1.2
4,169,286	-		MPMX20_03973	0.44	-0.5
4,169,328	+		MPMX20_03973	0.63	+0.4
4,169,338	+		MPMX20_03973	0.67	+1.1
4,169,346	+		MPMX20_03973	0.71	-0.2
4,169,374	+		MPMX20_03973	0.83	+0.4
4,169,383	+		MPMX20_03973	0.87	-0.6
4,169,413	+				-1.3
4,169,418	+				-3.0
4,169,461	+		MPMX20_03974	0.22	+1.0
4,169,525	+		MPMX20_03974	0.50	-1.2
4,169,559	+		MPMX20_03974	0.65	-2.2
4,169,564	+		MPMX20_03974	0.68	-0.2
4,169,584	+		MPMX20_03974	0.76	-0.4
4,169,584	+		MPMX20_03974	0.76	+0.7
4,169,584	+		MPMX20_03974	0.76	-0.2
4,169,603	-		MPMX20_03974	0.85	-1.2
4,169,605	+		MPMX20_03974	0.86	+1.6
4,169,648	+				+0.6
4,169,677	+				+2.6
4,169,677	+				-0.1
4,169,677	+				+1.1
4,169,685	-				-0.0
4,169,685	-				+1.0
4,169,692	+				+0.6
4,169,692	+				-0.2
4,169,710	-				-0.0
4,169,753	+		MPMX20_03975	0.14	-1.4
4,169,781	+		MPMX20_03975	0.22	-0.3
4,169,793	+		MPMX20_03975	0.26	-0.3
4,169,793	+		MPMX20_03975	0.26	-1.5
4,169,801	-		MPMX20_03975	0.28	+0.7
4,169,868	+		MPMX20_03975	0.48	+0.9
4,169,876	-		MPMX20_03975	0.50	+0.4
4,169,876	-		MPMX20_03975	0.50	+0.3
4,169,876	-		MPMX20_03975	0.50	-0.6
4,169,876	-		MPMX20_03975	0.50	-1.2
4,169,878	-		MPMX20_03975	0.51	-0.8
4,169,886	-		MPMX20_03975	0.53	+1.1
4,169,913	+		MPMX20_03975	0.61	-0.1
4,169,913	+		MPMX20_03975	0.61	-0.2
4,169,946	+		MPMX20_03975	0.71	+2.2
4,169,946	+		MPMX20_03975	0.71	-0.2
4,169,954	-		MPMX20_03975	0.73	-1.0
4,169,954	-		MPMX20_03975	0.73	-0.4
4,170,008	+		MPMX20_03975	0.89	-0.5
4,170,009	+		MPMX20_03975	0.90	-0.8
4,170,059	+				-0.4
4,170,059	+				-1.3
4,170,059	+				-0.8
4,170,059	+				-0.1
4,170,109	+				-0.9
4,170,145	+				-1.5
4,170,157	+				-1.2