Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03914

Experiment: M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2
4,121,343	+		MPMX20_03912	0.83	-0.8
4,121,343	+		MPMX20_03912	0.83	+0.3
4,121,343	+		MPMX20_03912	0.83	-1.8
4,121,351	-		MPMX20_03912	0.85	-0.4
4,121,351	-		MPMX20_03912	0.85	-2.4
4,121,355	-		MPMX20_03912	0.86	+0.5
4,121,396	+				-1.7
4,121,404	-				-0.5
4,121,404	-				+0.3
4,121,408	-				-2.2
4,121,471	+		MPMX20_03913	0.27	+1.2
4,121,472	-		MPMX20_03913	0.27	-0.5
4,121,501	+		MPMX20_03913	0.36	-1.8
4,121,501	+		MPMX20_03913	0.36	-0.1
4,121,509	-		MPMX20_03913	0.38	-0.4
4,121,509	-		MPMX20_03913	0.38	-0.7
4,121,509	-		MPMX20_03913	0.38	-0.5
4,121,509	-		MPMX20_03913	0.38	-1.6
4,121,553	+		MPMX20_03913	0.51	-1.9
4,121,568	-		MPMX20_03913	0.55	+1.1
4,121,588	-		MPMX20_03913	0.61	-2.0
4,121,661	+		MPMX20_03913	0.83	-1.0
4,121,669	-		MPMX20_03913	0.85	-0.8
4,121,670	-		MPMX20_03913	0.86	-0.1
4,121,683	+		MPMX20_03913	0.89	+0.9
4,121,691	-				+0.1
4,121,715	+				+2.1
4,121,718	+				+0.5
4,121,723	-				-2.2
4,121,827	-				+0.3
4,121,829	+				-0.1
4,121,829	+				-0.8
4,121,829	+				-0.2
4,121,829	+				+0.7
4,121,829	+				+0.1
4,121,829	+				+2.1
4,121,829	+				+0.5
4,121,829	+				-0.4
4,121,837	-				-0.1
4,121,837	-				-0.8
4,121,837	-				+1.9
4,121,841	+				-0.5
4,122,017	+				+0.8
4,122,022	+				+1.4
4,122,025	-				+1.5
4,122,089	+				+2.1
4,122,101	-				+1.5
4,122,102	-				+1.5
4,122,149	+				+0.2
4,122,157	-				-0.5
4,122,169	-				-1.2
4,122,177	+				-0.8
4,122,208	+				+1.5
4,122,286	+				+0.8
4,122,286	+				-1.4
4,122,325	+				-0.2
4,122,325	+				-1.0
4,122,325	+				-1.3
4,122,330	+				+0.9
4,122,343	-				-1.4
4,122,343	-				-0.2
4,122,395	+				-0.1
4,122,403	-				+1.2
4,122,416	+				-3.4
4,122,447	-				-1.4
4,122,467	+				-2.0
4,122,469	+				+0.4
4,122,475	-				-2.4
4,122,486	-				+0.3
4,122,491	+				+0.8
4,122,492	+				-2.1
4,122,492	+				-0.1
4,122,500	-				-0.8
4,122,526	-		MPMX20_03914	0.11	-0.5
4,122,624	-		MPMX20_03914	0.17	-0.1
4,122,685	-		MPMX20_03914	0.21	+3.1
4,122,700	-		MPMX20_03914	0.22	+1.3
4,122,703	-		MPMX20_03914	0.22	-0.2
4,122,705	+		MPMX20_03914	0.22	-0.2
4,122,713	-		MPMX20_03914	0.22	+1.9
4,122,728	+		MPMX20_03914	0.23	-1.3
4,122,731	-		MPMX20_03914	0.23	+1.5
4,122,736	+		MPMX20_03914	0.24	-1.7
4,122,736	+		MPMX20_03914	0.24	-0.5
4,122,736	+		MPMX20_03914	0.24	+1.1
4,122,736	+		MPMX20_03914	0.24	-1.1
4,122,736	+		MPMX20_03914	0.24	-1.6
4,122,741	+		MPMX20_03914	0.24	-1.0
4,122,752	-		MPMX20_03914	0.25	+0.1
4,122,771	+		MPMX20_03914	0.26	+3.9
4,122,797	-		MPMX20_03914	0.27	+1.6
4,122,808	+		MPMX20_03914	0.28	+1.5
4,122,808	+		MPMX20_03914	0.28	-1.0
4,122,816	-		MPMX20_03914	0.29	-1.2
4,122,819	+		MPMX20_03914	0.29	+0.2
4,122,827	-		MPMX20_03914	0.29	+8.9
4,122,876	-		MPMX20_03914	0.32	-1.0
4,122,892	-		MPMX20_03914	0.33	+0.3
4,122,917	+		MPMX20_03914	0.35	-1.2
4,122,955	+		MPMX20_03914	0.37	+1.1
4,122,969	+		MPMX20_03914	0.38	-1.0
4,123,038	-		MPMX20_03914	0.42	-0.7
4,123,058	+		MPMX20_03914	0.43	-0.1
4,123,101	-		MPMX20_03914	0.45	+1.1
4,123,109	-		MPMX20_03914	0.46	+1.0
4,123,137	+		MPMX20_03914	0.48	+0.8
4,123,169	-		MPMX20_03914	0.50	-1.6
4,123,215	-		MPMX20_03914	0.52	-1.5
4,123,311	+		MPMX20_03914	0.58	+2.3
4,123,311	+		MPMX20_03914	0.58	-0.9
4,123,311	+		MPMX20_03914	0.58	-2.4
4,123,311	+		MPMX20_03914	0.58	+1.5
4,123,319	-		MPMX20_03914	0.58	-1.0
4,123,319	-		MPMX20_03914	0.58	+0.1
4,123,319	-		MPMX20_03914	0.58	-0.8
4,123,328	+		MPMX20_03914	0.59	-0.9
4,123,328	+		MPMX20_03914	0.59	-0.2
4,123,336	-		MPMX20_03914	0.60	-2.0
4,123,407	-		MPMX20_03914	0.64	-0.5
4,123,407	-		MPMX20_03914	0.64	+0.4
4,123,407	-		MPMX20_03914	0.64	+0.5
4,123,407	-		MPMX20_03914	0.64	+0.1
4,123,554	+		MPMX20_03914	0.73	+2.4
4,123,567	+		MPMX20_03914	0.73	-0.1
4,123,567	-		MPMX20_03914	0.73	+4.7
4,123,567	-		MPMX20_03914	0.73	+0.9
4,123,603	-		MPMX20_03914	0.75	+0.1
4,123,679	-		MPMX20_03914	0.80	-0.9
4,123,720	+		MPMX20_03914	0.82	-1.4
4,123,728	-		MPMX20_03914	0.83	-0.1
4,123,729	+		MPMX20_03914	0.83	+1.1
4,123,743	+		MPMX20_03914	0.84	+0.1
4,123,776	-		MPMX20_03914	0.86	-1.0
4,123,831	+		MPMX20_03914	0.89	+0.3
4,123,839	-		MPMX20_03914	0.90	-1.1
4,123,855	-				-0.6
4,123,857	+				+1.1
4,123,857	+				-0.2
4,123,862	+				-0.5
4,123,862	+				-0.9
4,123,865	-				-0.9
4,123,867	+				-1.1
4,123,875	-				-1.9
4,123,875	-				+0.4
4,123,895	+				-2.2
4,123,898	-				-2.5
4,123,898	-				-1.9
4,123,903	-				-1.4
4,123,958	+				+3.1
4,123,966	-				-1.1
4,123,983	+				-1.4
4,123,999	-				+0.3
4,124,039	+				-1.7
4,124,039	+				-1.2
4,124,047	-				+2.1
4,124,047	-				-1.6
4,124,049	-				+1.3
4,124,062	-				-1.3
4,124,095	-		MPMX20_03915	0.14	-1.2
4,124,095	-		MPMX20_03915	0.14	-0.2
4,124,100	-		MPMX20_03915	0.15	-0.2
4,124,167	-		MPMX20_03915	0.27	-0.2
4,124,172	-		MPMX20_03915	0.28	-0.5
4,124,210	-		MPMX20_03915	0.35	+0.4
4,124,216	+		MPMX20_03915	0.36	+3.2
4,124,216	+		MPMX20_03915	0.36	+0.2
4,124,216	+		MPMX20_03915	0.36	-1.6
4,124,216	+		MPMX20_03915	0.36	+1.3
4,124,216	+		MPMX20_03915	0.36	-1.1
4,124,217	-		MPMX20_03915	0.36	-1.8
4,124,219	-		MPMX20_03915	0.37	+0.3
4,124,224	-		MPMX20_03915	0.38	-2.2
4,124,228	+		MPMX20_03915	0.38	+1.2
4,124,256	-		MPMX20_03915	0.44	-0.2
4,124,309	-		MPMX20_03915	0.53	+0.3
4,124,345	+		MPMX20_03915	0.60	-2.3
4,124,348	-		MPMX20_03915	0.60	-2.7
4,124,355	+		MPMX20_03915	0.62	-1.0
4,124,424	-		MPMX20_03915	0.74	+0.3
4,124,426	+		MPMX20_03915	0.74	-2.5
4,124,461	-		MPMX20_03915	0.81	-0.7
4,124,463	+		MPMX20_03915	0.81	-0.2
4,124,553	+				+0.8
4,124,561	-				-0.6
4,124,601	+				+0.3
4,124,621	+		MPMX20_03916	0.12	+0.3
4,124,646	+		MPMX20_03916	0.15	-0.4
4,124,646	+		MPMX20_03916	0.15	-1.4
4,124,646	+		MPMX20_03916	0.15	-0.6
4,124,654	-		MPMX20_03916	0.16	-2.9
4,124,665	-		MPMX20_03916	0.18	-0.5
4,124,665	-		MPMX20_03916	0.18	-0.9
4,124,674	+		MPMX20_03916	0.19	+2.2
4,124,706	-		MPMX20_03916	0.23	+1.3
4,124,766	-		MPMX20_03916	0.32	-0.3
4,124,866	-		MPMX20_03916	0.45	+1.0
4,124,991	-		MPMX20_03916	0.63	-1.9
4,125,005	+		MPMX20_03916	0.64	-1.6