Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03117

Experiment: M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2
3,271,637	+				-1.0
3,271,637	+				-0.7
3,271,645	-				-1.3
3,271,797	-		MPMX20_03116	0.14	-0.8
3,271,815	-		MPMX20_03116	0.17	-1.3
3,271,835	+		MPMX20_03116	0.20	-0.4
3,271,838	-		MPMX20_03116	0.20	+2.3
3,271,840	+		MPMX20_03116	0.20	-0.4
3,271,842	+		MPMX20_03116	0.21	-0.1
3,271,843	-		MPMX20_03116	0.21	+0.2
3,271,848	-		MPMX20_03116	0.22	-1.4
3,271,848	-		MPMX20_03116	0.22	-0.9
3,271,873	-		MPMX20_03116	0.25	+0.7
3,271,884	+		MPMX20_03116	0.27	-1.8
3,271,884	+		MPMX20_03116	0.27	-2.0
3,271,892	-		MPMX20_03116	0.28	-0.6
3,271,892	-		MPMX20_03116	0.28	-0.4
3,271,918	+		MPMX20_03116	0.31	-2.0
3,271,984	-		MPMX20_03116	0.40	-0.2
3,272,005	+		MPMX20_03116	0.43	-2.6
3,272,046	+		MPMX20_03116	0.49	+2.3
3,272,166	+		MPMX20_03116	0.66	+0.7
3,272,166	+		MPMX20_03116	0.66	+2.0
3,272,166	+		MPMX20_03116	0.66	+1.3
3,272,166	+		MPMX20_03116	0.66	-1.3
3,272,166	+		MPMX20_03116	0.66	+0.6
3,272,174	-		MPMX20_03116	0.67	-0.4
3,272,174	-		MPMX20_03116	0.67	+0.7
3,272,174	-		MPMX20_03116	0.67	+0.9
3,272,174	-		MPMX20_03116	0.67	+0.5
3,272,174	-		MPMX20_03116	0.67	+3.3
3,272,174	-		MPMX20_03116	0.67	-0.6
3,272,187	+		MPMX20_03116	0.69	+0.3
3,272,187	+		MPMX20_03116	0.69	+2.3
3,272,187	+		MPMX20_03116	0.69	-1.5
3,272,187	+		MPMX20_03116	0.69	-0.5
3,272,187	+		MPMX20_03116	0.69	-1.6
3,272,187	+		MPMX20_03116	0.69	+0.9
3,272,187	+		MPMX20_03116	0.69	+1.9
3,272,187	+		MPMX20_03116	0.69	+1.3
3,272,187	+		MPMX20_03116	0.69	-0.2
3,272,187	+		MPMX20_03116	0.69	-1.6
3,272,187	+		MPMX20_03116	0.69	+1.5
3,272,187	+		MPMX20_03116	0.69	-1.3
3,272,187	+		MPMX20_03116	0.69	-1.6
3,272,187	+		MPMX20_03116	0.69	-1.3
3,272,187	+		MPMX20_03116	0.69	-0.6
3,272,194	+		MPMX20_03116	0.70	+1.3
3,272,195	-		MPMX20_03116	0.70	-0.7
3,272,195	-		MPMX20_03116	0.70	+0.9
3,272,195	-		MPMX20_03116	0.70	-2.0
3,272,195	-		MPMX20_03116	0.70	-0.6
3,272,195	-		MPMX20_03116	0.70	+0.7
3,272,195	-		MPMX20_03116	0.70	-0.3
3,272,195	-		MPMX20_03116	0.70	-0.7
3,272,195	-		MPMX20_03116	0.70	+0.6
3,272,195	-		MPMX20_03116	0.70	-0.8
3,272,195	-		MPMX20_03116	0.70	-2.2
3,272,195	-		MPMX20_03116	0.70	-1.5
3,272,195	-		MPMX20_03116	0.70	-1.4
3,272,271	+		MPMX20_03116	0.80	+0.8
3,272,355	-				-1.5
3,272,355	-				-0.2
3,272,360	-				-1.0
3,272,360	-				+2.3
3,272,369	+				+1.2
3,272,369	+				+0.9
3,272,369	+				-0.1
3,272,418	+				+1.9
3,272,418	+				-0.6
3,272,426	-				+0.7
3,272,469	-				-0.1
3,272,469	-				-1.7
3,272,469	-				-0.4
3,272,487	+				+0.3
3,272,496	+				-1.1
3,272,516	-				+1.8
3,272,575	-				-0.1
3,272,607	+				+0.1
3,272,615	-				-0.2
3,272,640	-				-1.4
3,272,642	+				-1.7
3,272,647	+				+1.0
3,272,655	-				-0.1
3,272,676	+		MPMX20_03117	0.10	-0.9
3,272,767	-		MPMX20_03117	0.17	+0.9
3,272,801	-		MPMX20_03117	0.19	+1.3
3,272,819	-		MPMX20_03117	0.21	+0.2
3,272,876	+		MPMX20_03117	0.25	+1.3
3,272,894	-		MPMX20_03117	0.26	-0.3
3,272,918	-		MPMX20_03117	0.28	-1.6
3,272,948	-		MPMX20_03117	0.30	+2.3
3,272,965	+		MPMX20_03117	0.31	-1.7
3,272,976	+		MPMX20_03117	0.32	-0.1
3,273,009	+		MPMX20_03117	0.34	-1.1
3,273,036	-		MPMX20_03117	0.36	-1.0
3,273,062	-		MPMX20_03117	0.38	+0.4
3,273,117	+		MPMX20_03117	0.42	-0.3
3,273,147	+		MPMX20_03117	0.44	-0.1
3,273,147	+		MPMX20_03117	0.44	+0.1
3,273,147	+		MPMX20_03117	0.44	-0.7
3,273,147	+		MPMX20_03117	0.44	+1.3
3,273,230	-		MPMX20_03117	0.50	-2.1
3,273,251	+		MPMX20_03117	0.52	-0.8
3,273,257	-		MPMX20_03117	0.52	+2.3
3,273,257	-		MPMX20_03117	0.52	+0.0
3,273,322	+		MPMX20_03117	0.57	-1.0
3,273,431	+		MPMX20_03117	0.65	-1.1
3,273,439	-		MPMX20_03117	0.65	+0.8
3,273,511	+		MPMX20_03117	0.70	-1.9
3,273,599	+		MPMX20_03117	0.77	+0.5
3,273,603	-		MPMX20_03117	0.77	-0.3
3,273,651	-		MPMX20_03117	0.80	+0.1
3,273,698	-		MPMX20_03117	0.84	-1.7
3,273,743	+		MPMX20_03117	0.87	-0.7
3,273,743	+		MPMX20_03117	0.87	-1.1
3,273,756	-		MPMX20_03117	0.88	+0.9
3,273,761	-		MPMX20_03117	0.88	-1.1
3,273,804	+				-1.1
3,273,830	-				-1.2
3,273,844	+				+0.9
3,273,879	+				-0.5
3,273,924	+				-1.6
3,273,958	-				+1.6
3,274,006	-				-0.6
3,274,050	+				-2.0
3,274,079	-		MPMX20_03118	0.11	-1.4
3,274,133	-		MPMX20_03118	0.16	-1.2
3,274,199	+		MPMX20_03118	0.22	+0.3
3,274,199	+		MPMX20_03118	0.22	+1.3
3,274,207	-		MPMX20_03118	0.23	+3.3
3,274,234	+		MPMX20_03118	0.26	+0.8
3,274,255	+		MPMX20_03118	0.28	+3.3
3,274,257	+		MPMX20_03118	0.28	+0.4
3,274,260	-		MPMX20_03118	0.28	+0.1
3,274,273	-		MPMX20_03118	0.30	-0.7
3,274,282	-		MPMX20_03118	0.31	+0.9
3,274,300	-		MPMX20_03118	0.32	+1.9
3,274,301	-		MPMX20_03118	0.33	+3.3
3,274,301	-		MPMX20_03118	0.33	-1.7
3,274,426	+		MPMX20_03118	0.45	-0.6
3,274,426	+		MPMX20_03118	0.45	-0.2
3,274,436	+		MPMX20_03118	0.46	-1.1
3,274,449	-		MPMX20_03118	0.47	-0.3
3,274,454	-		MPMX20_03118	0.48	+0.5
3,274,474	+		MPMX20_03118	0.50	+2.2
3,274,530	-		MPMX20_03118	0.55	+3.6
3,274,562	+		MPMX20_03118	0.58	+0.5
3,274,562	+		MPMX20_03118	0.58	-0.4
3,274,571	-		MPMX20_03118	0.59	+0.7
3,274,620	-		MPMX20_03118	0.64	-0.2
3,274,620	-		MPMX20_03118	0.64	-1.1
3,274,620	-		MPMX20_03118	0.64	-0.1
3,274,628	+		MPMX20_03118	0.65	-1.4
3,274,649	+		MPMX20_03118	0.67	+0.4
3,274,725	-		MPMX20_03118	0.74	+2.3
3,274,727	+		MPMX20_03118	0.75	-2.2
3,274,750	+		MPMX20_03118	0.77	-1.1
3,274,750	+		MPMX20_03118	0.77	-0.5
3,274,750	+		MPMX20_03118	0.77	+0.8
3,274,775	+		MPMX20_03118	0.79	-1.0
3,274,775	+		MPMX20_03118	0.79	-0.6
3,274,775	+		MPMX20_03118	0.79	-0.5
3,274,775	+		MPMX20_03118	0.79	+1.5
3,274,775	+		MPMX20_03118	0.79	+1.5
3,274,775	+		MPMX20_03118	0.79	-0.1
3,274,775	+		MPMX20_03118	0.79	+1.3
3,274,775	+		MPMX20_03118	0.79	-0.3
3,274,775	+		MPMX20_03118	0.79	+0.1
3,274,775	+		MPMX20_03118	0.79	-0.5
3,274,775	+		MPMX20_03118	0.79	-0.9
3,274,775	+		MPMX20_03118	0.79	+0.9
3,274,775	+		MPMX20_03118	0.79	+4.7
3,274,777	+		MPMX20_03118	0.80	+2.5
3,274,777	+		MPMX20_03118	0.80	-0.5
3,274,780	+		MPMX20_03118	0.80	+0.7
3,274,780	+		MPMX20_03118	0.80	-0.8
3,274,780	+		MPMX20_03118	0.80	+0.4
3,274,780	+		MPMX20_03118	0.80	-0.2
3,274,780	+		MPMX20_03118	0.80	+0.1
3,274,783	-		MPMX20_03118	0.80	+1.7
3,274,783	-		MPMX20_03118	0.80	+0.9
3,274,783	-		MPMX20_03118	0.80	-0.6
3,274,783	-		MPMX20_03118	0.80	-3.0
3,274,783	-		MPMX20_03118	0.80	-0.9
3,274,788	-		MPMX20_03118	0.81	+0.0
3,274,793	+		MPMX20_03118	0.81	+1.1
3,274,794	+		MPMX20_03118	0.81	-0.8
3,274,795	-		MPMX20_03118	0.81	+0.6
3,274,804	+		MPMX20_03118	0.82	-0.6
3,274,804	+		MPMX20_03118	0.82	-1.0
3,274,817	+		MPMX20_03118	0.84	+1.8
3,274,819	+		MPMX20_03118	0.84	+3.3
3,274,827	-		MPMX20_03118	0.85	+0.1
3,274,829	+		MPMX20_03118	0.85	+0.9
3,274,832	+		MPMX20_03118	0.85	-0.2
3,274,832	+		MPMX20_03118	0.85	-0.1
3,274,836	+		MPMX20_03118	0.85	+1.7
3,274,836	+		MPMX20_03118	0.85	-0.4
3,274,836	+		MPMX20_03118	0.85	+0.5
3,274,836	+		MPMX20_03118	0.85	+1.7
3,274,836	+		MPMX20_03118	0.85	-0.6
3,274,836	+		MPMX20_03118	0.85	+0.7
3,274,841	+		MPMX20_03118	0.86	-0.9
3,274,841	+		MPMX20_03118	0.86	-0.1
3,274,841	+		MPMX20_03118	0.86	-0.1
3,274,841	+		MPMX20_03118	0.86	+0.1
3,274,841	+		MPMX20_03118	0.86	+1.1
3,274,841	+		MPMX20_03118	0.86	+3.3
3,274,841	+		MPMX20_03118	0.86	+1.3
3,274,843	+		MPMX20_03118	0.86	+0.8
3,274,843	+		MPMX20_03118	0.86	-1.3
3,274,843	+		MPMX20_03118	0.86	+0.5
3,274,843	+		MPMX20_03118	0.86	-1.5
3,274,843	+		MPMX20_03118	0.86	+0.7
3,274,843	+		MPMX20_03118	0.86	-0.2
3,274,843	+		MPMX20_03118	0.86	-0.3
3,274,843	+		MPMX20_03118	0.86	-0.1
3,274,843	+		MPMX20_03118	0.86	+0.3
3,274,843	+		MPMX20_03118	0.86	-2.6
3,274,844	-		MPMX20_03118	0.86	+2.7
3,274,844	-		MPMX20_03118	0.86	-0.4
3,274,844	-		MPMX20_03118	0.86	+1.3
3,274,844	-		MPMX20_03118	0.86	-1.0
3,274,847	+		MPMX20_03118	0.87	+1.2
3,274,847	+		MPMX20_03118	0.87	-0.6
3,274,847	+		MPMX20_03118	0.87	-1.7
3,274,847	+		MPMX20_03118	0.87	-2.4
3,274,847	+		MPMX20_03118	0.87	-1.1
3,274,849	-		MPMX20_03118	0.87	-1.0
3,274,851	-		MPMX20_03118	0.87	-1.5
3,274,855	-		MPMX20_03118	0.87	-0.7
3,274,858	+		MPMX20_03118	0.88	-0.2
3,274,859	+		MPMX20_03118	0.88	+0.4
3,274,859	+		MPMX20_03118	0.88	+0.2
3,274,859	+		MPMX20_03118	0.88	+0.3
3,274,859	+		MPMX20_03118	0.88	+0.5
3,274,859	+		MPMX20_03118	0.88	+0.9
3,274,859	+		MPMX20_03118	0.88	+0.7
3,274,866	-		MPMX20_03118	0.88	+1.5
3,274,868	+		MPMX20_03118	0.89	+0.5
3,274,868	+		MPMX20_03118	0.89	-0.6
3,274,868	+		MPMX20_03118	0.89	-1.5
3,274,868	+		MPMX20_03118	0.89	+2.4
3,274,868	+		MPMX20_03118	0.89	-0.3
3,274,868	+		MPMX20_03118	0.89	-0.5
3,274,868	+		MPMX20_03118	0.89	-1.5
3,274,868	+		MPMX20_03118	0.89	-0.8
3,274,869	+		MPMX20_03118	0.89	-0.8
3,274,869	+		MPMX20_03118	0.89	-1.1
3,274,875	+		MPMX20_03118	0.89	+2.7
3,274,900	+				+0.7
3,274,902	+				+0.7