Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02839

Experiment: M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2
2,992,880	-		MPMX20_02838	0.52	-0.9
2,992,882	+		MPMX20_02838	0.52	+2.5
2,992,882	+		MPMX20_02838	0.52	-0.9
2,992,885	-		MPMX20_02838	0.52	-1.5
2,992,890	-		MPMX20_02838	0.53	-1.4
2,992,922	+		MPMX20_02838	0.55	+0.7
2,992,937	-		MPMX20_02838	0.55	-0.9
2,992,941	+		MPMX20_02838	0.56	-0.4
2,992,972	-		MPMX20_02838	0.57	-1.5
2,992,984	-		MPMX20_02838	0.58	+2.5
2,992,989	-		MPMX20_02838	0.58	+1.5
2,993,043	-		MPMX20_02838	0.61	+1.5
2,993,048	-		MPMX20_02838	0.61	+2.5
2,993,087	-		MPMX20_02838	0.64	+0.0
2,993,095	+		MPMX20_02838	0.64	+0.2
2,993,098	-		MPMX20_02838	0.64	-0.5
2,993,098	-		MPMX20_02838	0.64	-0.1
2,993,103	-		MPMX20_02838	0.64	-0.7
2,993,103	-		MPMX20_02838	0.64	-0.4
2,993,105	+		MPMX20_02838	0.64	-1.0
2,993,105	+		MPMX20_02838	0.64	+0.7
2,993,183	-		MPMX20_02838	0.69	+1.7
2,993,202	+		MPMX20_02838	0.70	-2.1
2,993,227	+		MPMX20_02838	0.71	-0.8
2,993,227	+		MPMX20_02838	0.71	+0.5
2,993,227	+		MPMX20_02838	0.71	-0.5
2,993,227	+		MPMX20_02838	0.71	-1.8
2,993,227	+		MPMX20_02838	0.71	-0.1
2,993,235	-		MPMX20_02838	0.72	-1.7
2,993,235	-		MPMX20_02838	0.72	+0.7
2,993,235	-		MPMX20_02838	0.72	+1.6
2,993,235	-		MPMX20_02838	0.72	-2.6
2,993,235	-		MPMX20_02838	0.72	+1.8
2,993,235	-		MPMX20_02838	0.72	-0.4
2,993,260	-		MPMX20_02838	0.73	+0.3
2,993,263	+		MPMX20_02838	0.73	-1.0
2,993,340	-		MPMX20_02838	0.77	-1.3
2,993,344	+		MPMX20_02838	0.78	+0.6
2,993,389	+		MPMX20_02838	0.80	-0.8
2,993,402	+		MPMX20_02838	0.81	-0.9
2,993,420	-		MPMX20_02838	0.82	-0.6
2,993,420	-		MPMX20_02838	0.82	-1.8
2,993,477	+		MPMX20_02838	0.85	+1.9
2,993,566	+		MPMX20_02838	0.90	-0.7
2,993,576	+				+1.5
2,993,584	-				-1.8
2,993,597	-				+0.8
2,993,677	-				-0.1
2,993,697	+				-1.3
2,993,765	-				+1.1
2,993,767	-				-0.2
2,993,787	-				+1.4
2,993,904	+		MPMX20_02839	0.23	-0.1
2,993,923	+		MPMX20_02839	0.26	+0.5
2,993,990	+		MPMX20_02839	0.36	-0.2
2,993,998	-		MPMX20_02839	0.37	+2.1
2,994,001	+		MPMX20_02839	0.38	+1.3
2,994,013	+		MPMX20_02839	0.40	+1.0
2,994,025	+		MPMX20_02839	0.42	+0.2
2,994,033	-		MPMX20_02839	0.43	+0.7
2,994,035	+		MPMX20_02839	0.43	+2.0
2,994,035	+		MPMX20_02839	0.43	+1.6
2,994,035	+		MPMX20_02839	0.43	+3.1
2,994,035	+		MPMX20_02839	0.43	+1.1
2,994,035	+		MPMX20_02839	0.43	-0.7
2,994,035	+		MPMX20_02839	0.43	+2.5
2,994,035	+		MPMX20_02839	0.43	+0.6
2,994,043	-		MPMX20_02839	0.44	+1.4
2,994,043	-		MPMX20_02839	0.44	-0.9
2,994,043	-		MPMX20_02839	0.44	+2.0
2,994,043	-		MPMX20_02839	0.44	+1.9
2,994,043	-		MPMX20_02839	0.44	+1.3
2,994,043	-		MPMX20_02839	0.44	+1.4
2,994,043	-		MPMX20_02839	0.44	+1.8
2,994,043	-		MPMX20_02839	0.44	+0.7
2,994,043	-		MPMX20_02839	0.44	+0.2
2,994,057	-		MPMX20_02839	0.46	+1.4
2,994,063	+		MPMX20_02839	0.47	+0.3
2,994,095	+		MPMX20_02839	0.52	-1.2
2,994,095	+		MPMX20_02839	0.52	-1.3
2,994,103	-		MPMX20_02839	0.53	+1.3
2,994,103	-		MPMX20_02839	0.53	+1.6
2,994,124	-		MPMX20_02839	0.57	-0.0
2,994,132	-		MPMX20_02839	0.58	+1.9
2,994,147	+		MPMX20_02839	0.60	+0.6
2,994,155	-		MPMX20_02839	0.61	+0.9
2,994,175	-		MPMX20_02839	0.64	+1.9
2,994,215	+		MPMX20_02839	0.70	+1.1
2,994,215	+		MPMX20_02839	0.70	+2.3
2,994,216	+		MPMX20_02839	0.71	+2.0
2,994,216	+		MPMX20_02839	0.71	+3.2
2,994,216	+		MPMX20_02839	0.71	+1.5
2,994,223	-		MPMX20_02839	0.72	+1.9
2,994,224	-		MPMX20_02839	0.72	+1.2
2,994,241	+		MPMX20_02839	0.74	+0.2
2,994,241	+		MPMX20_02839	0.74	-0.7
2,994,241	+		MPMX20_02839	0.74	-0.6
2,994,241	+		MPMX20_02839	0.74	+1.1
2,994,241	+		MPMX20_02839	0.74	+1.1
2,994,241	+		MPMX20_02839	0.74	+0.7
2,994,249	-		MPMX20_02839	0.76	+1.5
2,994,249	-		MPMX20_02839	0.76	+1.5
2,994,249	-		MPMX20_02839	0.76	+1.2
2,994,249	-		MPMX20_02839	0.76	+0.1
2,994,250	+		MPMX20_02839	0.76	+3.9
2,994,250	+		MPMX20_02839	0.76	+2.6
2,994,258	-		MPMX20_02839	0.77	+0.7
2,994,270	+		MPMX20_02839	0.79	+1.1
2,994,285	+		MPMX20_02839	0.81	+0.8
2,994,305	+		MPMX20_02839	0.84	+1.5
2,994,305	+		MPMX20_02839	0.84	+0.1
2,994,305	+		MPMX20_02839	0.84	+0.2
2,994,305	+		MPMX20_02839	0.84	+0.6
2,994,305	+		MPMX20_02839	0.84	+1.7
2,994,305	+		MPMX20_02839	0.84	+2.5
2,994,305	+		MPMX20_02839	0.84	+1.5
2,994,305	+		MPMX20_02839	0.84	+1.0
2,994,305	+		MPMX20_02839	0.84	+1.9
2,994,305	+		MPMX20_02839	0.84	+2.3
2,994,305	+		MPMX20_02839	0.84	+3.1
2,994,305	+		MPMX20_02839	0.84	+1.6
2,994,305	+		MPMX20_02839	0.84	+1.2
2,994,305	+		MPMX20_02839	0.84	+2.0
2,994,310	+		MPMX20_02839	0.85	+0.8
2,994,310	+		MPMX20_02839	0.85	+1.5
2,994,313	-		MPMX20_02839	0.85	+2.3
2,994,313	-		MPMX20_02839	0.85	-0.4
2,994,313	-		MPMX20_02839	0.85	+1.6
2,994,318	-		MPMX20_02839	0.86	+0.8
2,994,324	+		MPMX20_02839	0.87	+0.3
2,994,324	+		MPMX20_02839	0.87	+2.2
2,994,353	+				+0.0
2,994,355	+				+2.6
2,994,355	+				-0.0
2,994,355	+				+1.2
2,994,355	+				+0.6
2,994,355	+				+1.9
2,994,363	-				+0.4
2,994,363	-				+1.6
2,994,363	-				+1.9
2,994,363	-				+2.0
2,994,365	-				+0.9
2,994,370	+				+0.8
2,994,370	+				+2.1
2,994,372	+				+0.3
2,994,374	+				+0.2
2,994,375	-				-0.4
2,994,382	+				+1.5
2,994,389	+				+0.4
2,994,390	+				+1.7
2,994,390	+				-0.5
2,994,393	+				+1.0
2,994,398	+				+0.4
2,994,398	+				+1.7
2,994,403	+				+1.4
2,994,408	+				+0.1
2,994,418	+				+1.9
2,994,423	+				+3.2
2,994,423	+				+1.7
2,994,424	+				+2.0
2,994,429	+				+0.1
2,994,429	+				+0.1
2,994,442	-				+1.1
2,994,489	-				+0.5
2,994,534	+				+2.8
2,994,537	-				-2.3
2,994,539	+				+0.6
2,994,539	+				-0.3
2,994,539	+				+1.0
2,994,544	+				+0.2
2,994,547	-				+0.7
2,994,547	-				-2.4
2,994,547	-				+0.8
2,994,547	-				+0.6
2,994,547	-				-0.9
2,994,547	-				-2.1
2,994,547	-				+0.1
2,994,547	-				+0.6
2,994,555	-				-0.7
2,994,555	-				+1.9
2,994,557	-				-0.3
2,994,557	-				-0.1
2,994,566	+				+0.3
2,994,566	+				-0.4
2,994,566	+				-0.9
2,994,567	+				-1.8
2,994,568	+				+1.9
2,994,573	+				+0.7
2,994,573	+				+1.9
2,994,574	-				-0.8
2,994,574	-				+1.6
2,994,574	-				+0.0
2,994,576	-				+0.9
2,994,576	-				-1.6
2,994,576	-				+0.4
2,994,576	-				-2.3
2,994,581	-				-0.7
2,994,581	-				+2.5
2,994,723	+				+0.8
2,994,723	+				+1.3
2,994,723	-				-0.6
2,994,725	+				+1.9
2,994,725	+				+0.1
2,994,725	+				-0.2
2,994,725	+				+1.0
2,994,725	+				+0.7
2,994,725	+				+0.6
2,994,725	+				-0.1
2,994,725	+				+0.9
2,994,725	+				+1.1
2,994,725	+				+1.3
2,994,725	+				+2.5
2,994,725	+				+0.1
2,994,725	+				+0.2
2,994,725	+				-1.0
2,994,725	+				+0.5
2,994,725	+				+0.2
2,994,725	+				+0.2
2,994,725	+				-0.7
2,994,726	-				+0.6
2,994,726	-				-0.2
2,994,731	-				+1.2
2,994,731	-				-1.6
2,994,731	-				+0.5
2,994,733	-				+0.6
2,994,733	-				+0.1
2,994,733	-				+1.0
2,994,733	-				+0.3
2,994,733	-				+0.2
2,994,733	-				-0.5
2,994,733	-				+1.5
2,994,733	-				+0.3
2,994,733	-				-0.3
2,994,733	-				+1.5
2,994,733	-				+0.7
2,994,733	-				+0.3
2,994,733	-				+1.6
2,994,733	-				+2.5
2,994,733	-				+1.8
2,994,733	-				-0.3
2,994,763	+				+1.2
2,994,763	+				+0.5
2,994,771	-				+3.5
2,994,803	+				+0.2
2,994,806	+				+0.4
2,994,808	+				-0.3
2,994,808	+				+3.5
2,994,808	+				-0.9
2,994,808	+				+0.9
2,994,808	+				+1.0
2,994,808	+				-0.4
2,994,808	+				+0.5
2,994,808	+				+2.7
2,994,808	+				-1.7
2,994,808	+				-1.0
2,994,808	+				+1.6
2,994,808	+				-0.1
2,994,808	+				+1.5
2,994,808	+				-0.8
2,994,808	+				+2.7
2,994,808	+				+1.5
2,994,808	+				+0.1
2,994,808	+				+2.2
2,994,808	+				+0.7
2,994,808	+				-0.6
2,994,808	+				+0.7
2,994,808	+				+0.9
2,994,808	+				+0.8
2,994,808	+				+1.2
2,994,808	+				+0.5
2,994,808	+				+1.9
2,994,808	+				+0.1
2,994,808	+				+4.2
2,994,808	+				-0.5
2,994,808	+				-2.2
2,994,808	+				-0.0
2,994,808	+				+0.9
2,994,808	+				+0.7
2,994,808	+				+1.5
2,994,808	+				+2.5
2,994,808	+				-0.7
2,994,810	+				-1.5
2,994,810	+				+1.3
2,994,810	+				+0.6
2,994,810	+				-0.3
2,994,811	-				-0.1
2,994,811	-				+0.7
2,994,811	-				+0.1
2,994,816	-				-0.5
2,994,816	-				+0.1
2,994,816	-				+0.7
2,994,816	-				-0.3
2,994,816	-				+1.5
2,994,816	-				+0.1
2,994,816	-				+1.2
2,994,816	-				+2.2
2,994,816	-				+2.5
2,994,816	-				+0.8
2,994,816	-				-0.4
2,994,816	-				-0.2
2,994,816	-				+2.8
2,994,816	-				+1.9
2,994,816	-				-0.4
2,994,819	-				+0.3
2,994,819	-				+0.9
2,994,823	+				+0.2
2,994,823	+				-0.6
2,994,831	-				+0.9
2,994,882	+				+1.6
2,994,882	+				+0.9
2,994,887	+				+0.7
2,994,890	-				+1.3
2,994,890	-				+1.6
2,994,890	-				+1.1
2,994,890	-				+0.6
2,994,917	-		MPMX20_02840	0.19	+0.2
2,994,954	+		MPMX20_02840	0.35	-2.2
2,994,954	+		MPMX20_02840	0.35	+1.8
2,994,962	-		MPMX20_02840	0.39	+0.1
2,994,967	+		MPMX20_02840	0.41	-0.6
2,994,973	+		MPMX20_02840	0.44	-0.3
2,994,973	+		MPMX20_02840	0.44	-0.7
2,994,973	+		MPMX20_02840	0.44	+3.7
2,994,973	+		MPMX20_02840	0.44	-0.4
2,994,974	+		MPMX20_02840	0.44	-1.5
2,994,974	+		MPMX20_02840	0.44	+1.0
2,994,974	+		MPMX20_02840	0.44	+1.4
2,994,974	+		MPMX20_02840	0.44	+3.5
2,994,974	+		MPMX20_02840	0.44	+0.9
2,994,974	+		MPMX20_02840	0.44	+1.2
2,994,974	+		MPMX20_02840	0.44	+2.5
2,994,974	+		MPMX20_02840	0.44	+2.3
2,994,974	+		MPMX20_02840	0.44	+0.4
2,994,979	+		MPMX20_02840	0.46	-0.5
2,994,979	+		MPMX20_02840	0.46	+1.4
2,994,979	+		MPMX20_02840	0.46	+0.7
2,994,979	+		MPMX20_02840	0.46	+0.1
2,994,979	+		MPMX20_02840	0.46	-0.2
2,994,979	+		MPMX20_02840	0.46	-0.4
2,994,979	+		MPMX20_02840	0.46	+1.4
2,994,979	+		MPMX20_02840	0.46	+1.1
2,994,979	+		MPMX20_02840	0.46	+1.5
2,994,979	+		MPMX20_02840	0.46	+1.9
2,994,979	+		MPMX20_02840	0.46	+1.4
2,994,979	+		MPMX20_02840	0.46	+0.6
2,994,979	+		MPMX20_02840	0.46	+1.5
2,994,979	+		MPMX20_02840	0.46	+1.5
2,994,979	+		MPMX20_02840	0.46	+0.6
2,994,979	+		MPMX20_02840	0.46	-0.7
2,994,979	+		MPMX20_02840	0.46	+0.9
2,994,979	+		MPMX20_02840	0.46	+0.2
2,994,979	+		MPMX20_02840	0.46	+0.3
2,994,979	+		MPMX20_02840	0.46	+1.2
2,994,979	+		MPMX20_02840	0.46	+1.1
2,994,979	+		MPMX20_02840	0.46	+1.1
2,994,979	+		MPMX20_02840	0.46	+3.5
2,994,979	+		MPMX20_02840	0.46	+1.1
2,994,979	+		MPMX20_02840	0.46	+0.3
2,994,979	+		MPMX20_02840	0.46	-0.1
2,994,979	+		MPMX20_02840	0.46	-0.3
2,994,979	+		MPMX20_02840	0.46	+1.9
2,994,979	+		MPMX20_02840	0.46	+1.5
2,994,982	-		MPMX20_02840	0.48	+3.2
2,994,982	-		MPMX20_02840	0.48	-1.3
2,994,982	-		MPMX20_02840	0.48	+1.2
2,994,982	-		MPMX20_02840	0.48	-0.3
2,994,982	-		MPMX20_02840	0.48	+3.5
2,994,982	-		MPMX20_02840	0.48	+0.9
2,994,982	-		MPMX20_02840	0.48	+1.5
2,994,983	+		MPMX20_02840	0.48	-0.5
2,994,983	+		MPMX20_02840	0.48	-1.1
2,994,987	-		MPMX20_02840	0.50	+3.3
2,994,987	-		MPMX20_02840	0.50	+0.7
2,994,987	-		MPMX20_02840	0.50	+1.1
2,994,987	-		MPMX20_02840	0.50	+3.5
2,994,987	-		MPMX20_02840	0.50	-0.6
2,994,987	-		MPMX20_02840	0.50	-0.7
2,994,987	-		MPMX20_02840	0.50	+2.5
2,994,987	-		MPMX20_02840	0.50	+1.9
2,994,987	-		MPMX20_02840	0.50	+1.1
2,994,987	-		MPMX20_02840	0.50	+0.5
2,994,987	-		MPMX20_02840	0.50	-1.4
2,994,987	-		MPMX20_02840	0.50	+1.7
2,994,990	+		MPMX20_02840	0.51	+0.5
2,994,991	-		MPMX20_02840	0.52	+0.9
2,994,991	-		MPMX20_02840	0.52	+2.5
2,995,027	+		MPMX20_02840	0.68	+0.9
2,995,027	+		MPMX20_02840	0.68	+2.8
2,995,027	+		MPMX20_02840	0.68	-0.8
2,995,027	+		MPMX20_02840	0.68	+0.3
2,995,029	+		MPMX20_02840	0.68	+1.4
2,995,034	+		MPMX20_02840	0.71	-1.3
2,995,034	+		MPMX20_02840	0.71	-0.0
2,995,036	-		MPMX20_02840	0.72	-2.0
2,995,039	+		MPMX20_02840	0.73	+3.2
2,995,039	+		MPMX20_02840	0.73	-0.1
2,995,039	+		MPMX20_02840	0.73	+1.5
2,995,052	+		MPMX20_02840	0.79	+2.5
2,995,052	+		MPMX20_02840	0.79	-0.2
2,995,060	-		MPMX20_02840	0.82	+0.5
2,995,121	+				+1.4
2,995,121	+				-0.2
2,995,123	+				-1.4
2,995,129	-				+0.5
2,995,129	-				+1.5
2,995,129	-				+2.2
2,995,129	-				-0.4
2,995,129	-				+0.7
2,995,129	-				+3.1
2,995,129	-				+0.6
2,995,129	-				-0.6
2,995,129	-				-0.9
2,995,136	-				+2.7
2,995,136	-				+0.2
2,995,138	+				-2.0
2,995,142	-				-0.5
2,995,146	-				-0.1
2,995,146	-				+0.7
2,995,177	-				+1.8
2,995,191	-				+2.9
2,995,200	+				+2.7
2,995,202	-				+0.7
2,995,202	-				-0.8
2,995,246	+		MPMX20_02841	0.11	-0.5
2,995,254	-		MPMX20_02841	0.12	+0.1
2,995,254	-		MPMX20_02841	0.12	+0.3
2,995,302	-		MPMX20_02841	0.19	-0.5
2,995,309	-		MPMX20_02841	0.20	-0.5
2,995,312	-		MPMX20_02841	0.20	-1.3
2,995,312	-		MPMX20_02841	0.20	-2.2
2,995,344	-		MPMX20_02841	0.25	+0.2
2,995,381	-		MPMX20_02841	0.30	-1.0
2,995,388	-		MPMX20_02841	0.31	-0.7