Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01593

Experiment: M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01591 and MPMX20_01592 overlap by 4 nucleotidesMPMX20_01592 and MPMX20_01593 are separated by 9 nucleotidesMPMX20_01593 and MPMX20_01594 overlap by 4 nucleotidesMPMX20_01594 and MPMX20_01595 overlap by 8 nucleotides MPMX20_01591: MPMX20_01591 - Aliphatic sulfonates import ATP-binding protein SsuB, at 1,680,856 to 1,681,626 _01591 MPMX20_01592: MPMX20_01592 - Putative aliphatic sulfonates transport permease protein SsuC, at 1,681,623 to 1,682,414 _01592 MPMX20_01593: MPMX20_01593 - Alkanesulfonate monooxygenase, at 1,682,424 to 1,683,569 _01593 MPMX20_01594: MPMX20_01594 - Putative aliphatic sulfonates-binding protein, at 1,683,566 to 1,684,528 _01594 MPMX20_01595: MPMX20_01595 - FMN reductase (NADPH), at 1,684,521 to 1,685,096 _01595 Position (kb) 1682 1683 1684Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10 11 12 13at 1681.443 kb on + strand, within MPMX20_01591at 1681.462 kb on + strand, within MPMX20_01591at 1681.580 kb on + strandat 1681.588 kb on - strandat 1681.588 kb on - strandat 1681.596 kb on - strandat 1681.619 kb on - strandat 1681.837 kb on - strand, within MPMX20_01592at 1681.838 kb on + strand, within MPMX20_01592at 1681.893 kb on - strand, within MPMX20_01592at 1681.928 kb on + strand, within MPMX20_01592at 1681.928 kb on + strand, within MPMX20_01592at 1681.928 kb on + strand, within MPMX20_01592at 1681.930 kb on + strand, within MPMX20_01592at 1681.936 kb on - strand, within MPMX20_01592at 1681.936 kb on - strand, within MPMX20_01592at 1681.936 kb on - strand, within MPMX20_01592at 1681.936 kb on - strand, within MPMX20_01592at 1681.936 kb on - strand, within MPMX20_01592at 1681.953 kb on - strand, within MPMX20_01592at 1682.007 kb on + strand, within MPMX20_01592at 1682.008 kb on + strand, within MPMX20_01592at 1682.009 kb on + strand, within MPMX20_01592at 1682.015 kb on - strand, within MPMX20_01592at 1682.016 kb on - strand, within MPMX20_01592at 1682.016 kb on - strand, within MPMX20_01592at 1682.016 kb on - strand, within MPMX20_01592at 1682.157 kb on + strand, within MPMX20_01592at 1682.243 kb on - strand, within MPMX20_01592at 1682.276 kb on + strand, within MPMX20_01592at 1682.285 kb on + strand, within MPMX20_01592at 1682.300 kb on + strand, within MPMX20_01592at 1682.362 kb on + strandat 1682.420 kb on + strandat 1682.422 kb on + strandat 1682.427 kb on + strandat 1682.430 kb on - strandat 1682.430 kb on - strandat 1682.512 kb on - strandat 1682.601 kb on + strand, within MPMX20_01593at 1682.601 kb on + strand, within MPMX20_01593at 1682.644 kb on - strand, within MPMX20_01593at 1682.644 kb on - strand, within MPMX20_01593at 1682.644 kb on - strand, within MPMX20_01593at 1682.702 kb on + strand, within MPMX20_01593at 1682.747 kb on + strand, within MPMX20_01593at 1682.752 kb on + strand, within MPMX20_01593at 1682.765 kb on - strand, within MPMX20_01593at 1682.914 kb on - strand, within MPMX20_01593at 1682.977 kb on + strand, within MPMX20_01593at 1682.980 kb on - strand, within MPMX20_01593at 1682.985 kb on - strand, within MPMX20_01593at 1682.985 kb on - strand, within MPMX20_01593at 1683.026 kb on + strand, within MPMX20_01593at 1683.034 kb on - strand, within MPMX20_01593at 1683.045 kb on + strand, within MPMX20_01593at 1683.087 kb on - strand, within MPMX20_01593at 1683.258 kb on - strand, within MPMX20_01593at 1683.258 kb on - strand, within MPMX20_01593at 1683.336 kb on - strand, within MPMX20_01593at 1683.502 kb on - strandat 1683.519 kb on - strandat 1683.522 kb on + strandat 1683.565 kb on - strandat 1683.587 kb on + strandat 1683.599 kb on + strandat 1683.625 kb on + strandat 1683.700 kb on + strand, within MPMX20_01594at 1683.708 kb on - strand, within MPMX20_01594at 1683.724 kb on + strand, within MPMX20_01594at 1683.730 kb on - strand, within MPMX20_01594at 1683.786 kb on - strand, within MPMX20_01594at 1683.786 kb on - strand, within MPMX20_01594at 1683.799 kb on + strand, within MPMX20_01594at 1683.823 kb on + strand, within MPMX20_01594at 1683.823 kb on + strand, within MPMX20_01594at 1683.831 kb on - strand, within MPMX20_01594at 1683.831 kb on - strand, within MPMX20_01594at 1683.833 kb on + strand, within MPMX20_01594at 1683.841 kb on - strand, within MPMX20_01594at 1683.949 kb on + strand, within MPMX20_01594at 1683.965 kb on - strand, within MPMX20_01594at 1683.996 kb on + strand, within MPMX20_01594at 1684.004 kb on + strand, within MPMX20_01594at 1684.004 kb on - strand, within MPMX20_01594at 1684.006 kb on + strand, within MPMX20_01594at 1684.047 kb on + strand, within MPMX20_01594at 1684.047 kb on + strand, within MPMX20_01594at 1684.071 kb on - strand, within MPMX20_01594at 1684.074 kb on + strand, within MPMX20_01594at 1684.082 kb on - strand, within MPMX20_01594at 1684.082 kb on - strand, within MPMX20_01594at 1684.108 kb on + strand, within MPMX20_01594at 1684.133 kb on + strand, within MPMX20_01594at 1684.133 kb on + strand, within MPMX20_01594at 1684.159 kb on + strand, within MPMX20_01594at 1684.166 kb on - strand, within MPMX20_01594at 1684.167 kb on - strand, within MPMX20_01594at 1684.167 kb on - strand, within MPMX20_01594at 1684.172 kb on + strand, within MPMX20_01594at 1684.177 kb on - strand, within MPMX20_01594at 1684.197 kb on + strand, within MPMX20_01594at 1684.221 kb on - strand, within MPMX20_01594at 1684.224 kb on + strand, within MPMX20_01594at 1684.232 kb on - strand, within MPMX20_01594at 1684.246 kb on - strand, within MPMX20_01594at 1684.296 kb on - strand, within MPMX20_01594at 1684.312 kb on - strand, within MPMX20_01594at 1684.402 kb on + strand, within MPMX20_01594at 1684.449 kb on + strandat 1684.498 kb on - strandat 1684.537 kb on + strandat 1684.563 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2
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1,681,443 + MPMX20_01591 0.76 -1.8
1,681,462 + MPMX20_01591 0.79 -0.1
1,681,580 + +0.9
1,681,588 - +1.6
1,681,588 - +0.1
1,681,596 - +0.5
1,681,619 - +1.2
1,681,837 - MPMX20_01592 0.27 -1.2
1,681,838 + MPMX20_01592 0.27 -0.0
1,681,893 - MPMX20_01592 0.34 -0.7
1,681,928 + MPMX20_01592 0.39 -1.9
1,681,928 + MPMX20_01592 0.39 -3.0
1,681,928 + MPMX20_01592 0.39 +0.6
1,681,930 + MPMX20_01592 0.39 -1.9
1,681,936 - MPMX20_01592 0.40 +0.1
1,681,936 - MPMX20_01592 0.40 -1.0
1,681,936 - MPMX20_01592 0.40 -0.3
1,681,936 - MPMX20_01592 0.40 -2.6
1,681,936 - MPMX20_01592 0.40 +0.4
1,681,953 - MPMX20_01592 0.42 -1.0
1,682,007 + MPMX20_01592 0.48 +2.4
1,682,008 + MPMX20_01592 0.49 -1.3
1,682,009 + MPMX20_01592 0.49 +3.2
1,682,015 - MPMX20_01592 0.49 +0.2
1,682,016 - MPMX20_01592 0.50 +0.6
1,682,016 - MPMX20_01592 0.50 +1.6
1,682,016 - MPMX20_01592 0.50 +0.7
1,682,157 + MPMX20_01592 0.67 +2.2
1,682,243 - MPMX20_01592 0.78 +0.7
1,682,276 + MPMX20_01592 0.82 -1.5
1,682,285 + MPMX20_01592 0.84 -1.1
1,682,300 + MPMX20_01592 0.85 -1.5
1,682,362 + -1.4
1,682,420 + -0.3
1,682,422 + -1.3
1,682,427 + +0.5
1,682,430 - -0.6
1,682,430 - -1.5
1,682,512 - +0.8
1,682,601 + MPMX20_01593 0.15 -0.4
1,682,601 + MPMX20_01593 0.15 -0.3
1,682,644 - MPMX20_01593 0.19 +0.6
1,682,644 - MPMX20_01593 0.19 -0.7
1,682,644 - MPMX20_01593 0.19 -0.3
1,682,702 + MPMX20_01593 0.24 -1.9
1,682,747 + MPMX20_01593 0.28 -0.3
1,682,752 + MPMX20_01593 0.29 -2.0
1,682,765 - MPMX20_01593 0.30 +0.6
1,682,914 - MPMX20_01593 0.43 -2.2
1,682,977 + MPMX20_01593 0.48 -0.6
1,682,980 - MPMX20_01593 0.49 +1.6
1,682,985 - MPMX20_01593 0.49 +0.6
1,682,985 - MPMX20_01593 0.49 +0.8
1,683,026 + MPMX20_01593 0.53 -2.5
1,683,034 - MPMX20_01593 0.53 +1.0
1,683,045 + MPMX20_01593 0.54 -0.3
1,683,087 - MPMX20_01593 0.58 +3.4
1,683,258 - MPMX20_01593 0.73 +1.2
1,683,258 - MPMX20_01593 0.73 -0.5
1,683,336 - MPMX20_01593 0.80 +13.6
1,683,502 - -2.4
1,683,519 - -1.3
1,683,522 + -0.2
1,683,565 - -0.4
1,683,587 + +0.0
1,683,599 + -1.0
1,683,625 + +0.4
1,683,700 + MPMX20_01594 0.14 -0.5
1,683,708 - MPMX20_01594 0.15 +0.3
1,683,724 + MPMX20_01594 0.16 +0.0
1,683,730 - MPMX20_01594 0.17 -1.0
1,683,786 - MPMX20_01594 0.23 -1.1
1,683,786 - MPMX20_01594 0.23 +1.1
1,683,799 + MPMX20_01594 0.24 -1.2
1,683,823 + MPMX20_01594 0.27 -0.6
1,683,823 + MPMX20_01594 0.27 +0.4
1,683,831 - MPMX20_01594 0.28 -1.0
1,683,831 - MPMX20_01594 0.28 -0.7
1,683,833 + MPMX20_01594 0.28 +0.2
1,683,841 - MPMX20_01594 0.29 -0.6
1,683,949 + MPMX20_01594 0.40 +1.0
1,683,965 - MPMX20_01594 0.41 +0.1
1,683,996 + MPMX20_01594 0.45 +0.7
1,684,004 + MPMX20_01594 0.45 +0.1
1,684,004 - MPMX20_01594 0.45 -1.2
1,684,006 + MPMX20_01594 0.46 +1.4
1,684,047 + MPMX20_01594 0.50 -1.0
1,684,047 + MPMX20_01594 0.50 +0.7
1,684,071 - MPMX20_01594 0.52 +0.8
1,684,074 + MPMX20_01594 0.53 +0.4
1,684,082 - MPMX20_01594 0.54 -2.7
1,684,082 - MPMX20_01594 0.54 -1.0
1,684,108 + MPMX20_01594 0.56 +0.9
1,684,133 + MPMX20_01594 0.59 +1.9
1,684,133 + MPMX20_01594 0.59 +0.0
1,684,159 + MPMX20_01594 0.62 -0.5
1,684,166 - MPMX20_01594 0.62 +0.4
1,684,167 - MPMX20_01594 0.62 +0.7
1,684,167 - MPMX20_01594 0.62 +1.2
1,684,172 + MPMX20_01594 0.63 -1.5
1,684,177 - MPMX20_01594 0.63 -0.3
1,684,197 + MPMX20_01594 0.66 +0.6
1,684,221 - MPMX20_01594 0.68 -0.3
1,684,224 + MPMX20_01594 0.68 +0.6
1,684,232 - MPMX20_01594 0.69 -0.8
1,684,246 - MPMX20_01594 0.71 +0.2
1,684,296 - MPMX20_01594 0.76 +3.2
1,684,312 - MPMX20_01594 0.77 -0.7
1,684,402 + MPMX20_01594 0.87 -2.1
1,684,449 + +0.1
1,684,498 - -0.9
1,684,537 + +1.9
1,684,563 + -0.9

Or see this region's nucleotide sequence