Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00867

Experiment: M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00866 and MPMX20_00867 overlap by 4 nucleotidesMPMX20_00867 and MPMX20_00868 are separated by 38 nucleotides MPMX20_00866: MPMX20_00866 - Lipid-A-disaccharide synthase, at 914,917 to 916,065 _00866 MPMX20_00867: MPMX20_00867 - Ribonuclease HII, at 916,062 to 916,658 _00867 MPMX20_00868: MPMX20_00868 - DNA polymerase III subunit alpha, at 916,697 to 920,179 _00868 Position (kb) 916 917Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 916.043 kb on + strandat 916.045 kb on + strandat 916.045 kb on + strandat 916.232 kb on + strand, within MPMX20_00867at 916.259 kb on + strand, within MPMX20_00867at 916.259 kb on + strand, within MPMX20_00867at 916.267 kb on + strand, within MPMX20_00867at 916.318 kb on + strand, within MPMX20_00867at 916.427 kb on + strand, within MPMX20_00867at 916.434 kb on + strand, within MPMX20_00867at 916.511 kb on + strand, within MPMX20_00867at 916.517 kb on + strand, within MPMX20_00867at 916.544 kb on + strand, within MPMX20_00867at 916.544 kb on + strand, within MPMX20_00867at 916.544 kb on + strand, within MPMX20_00867at 916.544 kb on + strand, within MPMX20_00867at 916.544 kb on + strand, within MPMX20_00867at 916.544 kb on + strand, within MPMX20_00867at 916.544 kb on + strand, within MPMX20_00867

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2
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916,043 + -0.5
916,045 + -2.9
916,045 + -0.1
916,232 + MPMX20_00867 0.28 -0.3
916,259 + MPMX20_00867 0.33 -0.6
916,259 + MPMX20_00867 0.33 +0.5
916,267 + MPMX20_00867 0.34 -2.9
916,318 + MPMX20_00867 0.43 +1.3
916,427 + MPMX20_00867 0.61 -1.6
916,434 + MPMX20_00867 0.62 -0.5
916,511 + MPMX20_00867 0.75 -1.1
916,517 + MPMX20_00867 0.76 -1.7
916,544 + MPMX20_00867 0.81 +0.1
916,544 + MPMX20_00867 0.81 -0.2
916,544 + MPMX20_00867 0.81 +6.0
916,544 + MPMX20_00867 0.81 -0.3
916,544 + MPMX20_00867 0.81 -0.3
916,544 + MPMX20_00867 0.81 -0.7
916,544 + MPMX20_00867 0.81 -0.5

Or see this region's nucleotide sequence