Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00764

Experiment: M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00763 and MPMX20_00764 are separated by 88 nucleotidesMPMX20_00764 and MPMX20_00765 are separated by 119 nucleotides MPMX20_00763: MPMX20_00763 - HTH-type transcriptional regulator SgrR, at 794,488 to 796,143 _00763 MPMX20_00764: MPMX20_00764 - hypothetical protein, at 796,232 to 796,384 _00764 MPMX20_00765: MPMX20_00765 - Sugar efflux transporter A, at 796,504 to 797,682 _00765 Position (kb) 796 797Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 795.236 kb on + strand, within MPMX20_00763at 795.332 kb on - strand, within MPMX20_00763at 795.332 kb on - strand, within MPMX20_00763at 795.337 kb on - strand, within MPMX20_00763at 795.402 kb on + strand, within MPMX20_00763at 795.405 kb on + strand, within MPMX20_00763at 795.405 kb on + strand, within MPMX20_00763at 795.405 kb on + strand, within MPMX20_00763at 795.410 kb on - strand, within MPMX20_00763at 795.450 kb on + strand, within MPMX20_00763at 795.464 kb on - strand, within MPMX20_00763at 795.471 kb on + strand, within MPMX20_00763at 795.479 kb on - strand, within MPMX20_00763at 795.479 kb on - strand, within MPMX20_00763at 795.479 kb on - strand, within MPMX20_00763at 795.479 kb on - strand, within MPMX20_00763at 795.481 kb on - strand, within MPMX20_00763at 795.548 kb on + strand, within MPMX20_00763at 795.553 kb on + strand, within MPMX20_00763at 795.560 kb on - strand, within MPMX20_00763at 795.622 kb on - strand, within MPMX20_00763at 795.724 kb on + strand, within MPMX20_00763at 795.732 kb on - strand, within MPMX20_00763at 795.732 kb on - strand, within MPMX20_00763at 795.883 kb on - strand, within MPMX20_00763at 795.937 kb on - strand, within MPMX20_00763at 795.937 kb on - strand, within MPMX20_00763at 795.940 kb on + strand, within MPMX20_00763at 795.953 kb on - strand, within MPMX20_00763at 795.975 kb on - strand, within MPMX20_00763at 795.977 kb on + strand, within MPMX20_00763at 795.994 kb on - strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.040 kb on + strandat 796.040 kb on - strandat 796.042 kb on + strandat 796.050 kb on - strandat 796.068 kb on + strandat 796.214 kb on + strandat 796.291 kb on + strand, within MPMX20_00764at 796.309 kb on - strand, within MPMX20_00764at 796.311 kb on + strand, within MPMX20_00764at 796.393 kb on + strandat 796.506 kb on + strandat 796.531 kb on + strandat 796.645 kb on - strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.677 kb on + strand, within MPMX20_00765at 796.700 kb on + strand, within MPMX20_00765at 796.700 kb on + strand, within MPMX20_00765at 796.771 kb on + strand, within MPMX20_00765at 796.811 kb on + strand, within MPMX20_00765at 796.819 kb on + strand, within MPMX20_00765at 796.962 kb on - strand, within MPMX20_00765at 796.967 kb on - strand, within MPMX20_00765at 796.978 kb on + strand, within MPMX20_00765at 796.985 kb on + strand, within MPMX20_00765at 796.996 kb on + strand, within MPMX20_00765at 797.054 kb on + strand, within MPMX20_00765at 797.054 kb on + strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.074 kb on + strand, within MPMX20_00765at 797.074 kb on + strand, within MPMX20_00765at 797.081 kb on + strand, within MPMX20_00765at 797.082 kb on - strand, within MPMX20_00765at 797.087 kb on - strand, within MPMX20_00765at 797.087 kb on - strand, within MPMX20_00765at 797.110 kb on + strand, within MPMX20_00765at 797.116 kb on - strand, within MPMX20_00765at 797.117 kb on - strand, within MPMX20_00765at 797.120 kb on + strand, within MPMX20_00765at 797.122 kb on + strand, within MPMX20_00765at 797.130 kb on - strand, within MPMX20_00765at 797.130 kb on - strand, within MPMX20_00765at 797.236 kb on + strand, within MPMX20_00765at 797.255 kb on + strand, within MPMX20_00765at 797.276 kb on - strand, within MPMX20_00765

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2
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795,236 + MPMX20_00763 0.45 -0.3
795,332 - MPMX20_00763 0.51 -1.2
795,332 - MPMX20_00763 0.51 -1.8
795,337 - MPMX20_00763 0.51 +0.8
795,402 + MPMX20_00763 0.55 -0.5
795,405 + MPMX20_00763 0.55 -0.9
795,405 + MPMX20_00763 0.55 +0.2
795,405 + MPMX20_00763 0.55 +0.5
795,410 - MPMX20_00763 0.56 -0.3
795,450 + MPMX20_00763 0.58 -1.7
795,464 - MPMX20_00763 0.59 +1.1
795,471 + MPMX20_00763 0.59 -0.0
795,479 - MPMX20_00763 0.60 -1.1
795,479 - MPMX20_00763 0.60 -2.2
795,479 - MPMX20_00763 0.60 -1.6
795,479 - MPMX20_00763 0.60 -0.4
795,481 - MPMX20_00763 0.60 +1.1
795,548 + MPMX20_00763 0.64 +1.5
795,553 + MPMX20_00763 0.64 +0.4
795,560 - MPMX20_00763 0.65 +0.5
795,622 - MPMX20_00763 0.68 +0.1
795,724 + MPMX20_00763 0.75 -1.4
795,732 - MPMX20_00763 0.75 -0.0
795,732 - MPMX20_00763 0.75 -1.3
795,883 - MPMX20_00763 0.84 -0.3
795,937 - MPMX20_00763 0.88 +3.1
795,937 - MPMX20_00763 0.88 -0.8
795,940 + MPMX20_00763 0.88 +0.1
795,953 - MPMX20_00763 0.88 -0.2
795,975 - MPMX20_00763 0.90 -0.9
795,977 + MPMX20_00763 0.90 -1.5
795,994 - +0.1
796,007 + -2.6
796,007 + -0.9
796,007 + +1.1
796,007 + -0.5
796,007 + +0.1
796,007 + +0.5
796,007 + +0.3
796,007 + +0.7
796,007 + +1.1
796,007 + +0.6
796,007 + -0.3
796,007 + -0.4
796,007 + -0.1
796,007 + +0.1
796,007 + -2.1
796,015 - +0.7
796,015 - +1.5
796,015 - +0.1
796,015 - -0.3
796,015 - +0.1
796,015 - -0.9
796,015 - +0.9
796,015 - +1.1
796,015 - -0.0
796,015 - -0.1
796,015 - -2.0
796,040 + -0.1
796,040 - -0.1
796,042 + -0.8
796,050 - -0.6
796,068 + -0.3
796,214 + -0.1
796,291 + MPMX20_00764 0.39 +1.7
796,309 - MPMX20_00764 0.50 +0.5
796,311 + MPMX20_00764 0.52 +0.3
796,393 + -0.5
796,506 + -0.5
796,531 + -0.3
796,645 - MPMX20_00765 0.12 -0.2
796,662 + MPMX20_00765 0.13 -1.0
796,662 + MPMX20_00765 0.13 -0.7
796,662 + MPMX20_00765 0.13 -1.3
796,662 + MPMX20_00765 0.13 +1.0
796,662 + MPMX20_00765 0.13 +1.1
796,670 - MPMX20_00765 0.14 -0.6
796,670 - MPMX20_00765 0.14 -2.0
796,670 - MPMX20_00765 0.14 -1.6
796,670 - MPMX20_00765 0.14 +1.5
796,670 - MPMX20_00765 0.14 -1.1
796,670 - MPMX20_00765 0.14 -0.4
796,677 + MPMX20_00765 0.15 -0.2
796,700 + MPMX20_00765 0.17 -0.4
796,700 + MPMX20_00765 0.17 +1.1
796,771 + MPMX20_00765 0.23 +0.8
796,811 + MPMX20_00765 0.26 -0.3
796,819 + MPMX20_00765 0.27 +1.1
796,962 - MPMX20_00765 0.39 +0.6
796,967 - MPMX20_00765 0.39 +1.2
796,978 + MPMX20_00765 0.40 +1.5
796,985 + MPMX20_00765 0.41 -0.8
796,996 + MPMX20_00765 0.42 -0.7
797,054 + MPMX20_00765 0.47 +3.6
797,054 + MPMX20_00765 0.47 -1.2
797,062 - MPMX20_00765 0.47 -2.1
797,062 - MPMX20_00765 0.47 -1.1
797,062 - MPMX20_00765 0.47 -1.7
797,062 - MPMX20_00765 0.47 -1.5
797,074 + MPMX20_00765 0.48 +1.7
797,074 + MPMX20_00765 0.48 +0.7
797,081 + MPMX20_00765 0.49 +0.1
797,082 - MPMX20_00765 0.49 -1.2
797,087 - MPMX20_00765 0.49 +2.2
797,087 - MPMX20_00765 0.49 +0.3
797,110 + MPMX20_00765 0.51 -0.0
797,116 - MPMX20_00765 0.52 -1.0
797,117 - MPMX20_00765 0.52 -0.1
797,120 + MPMX20_00765 0.52 -0.9
797,122 + MPMX20_00765 0.52 +4.4
797,130 - MPMX20_00765 0.53 -0.6
797,130 - MPMX20_00765 0.53 -0.5
797,236 + MPMX20_00765 0.62 -0.3
797,255 + MPMX20_00765 0.64 -0.5
797,276 - MPMX20_00765 0.65 +0.3

Or see this region's nucleotide sequence