Experiment: 1-octen-3-ol 0.6784116667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS19065 and AZOBR_RS19070 are separated by 442 nucleotides AZOBR_RS19070 and AZOBR_RS19075 are separated by 250 nucleotides AZOBR_RS19075 and AZOBR_RS19080 overlap by 1 nucleotides
AZOBR_RS19065: AZOBR_RS19065 - anthranilate phosphoribosyltransferase, at 1,045,419 to 1,046,909
_RS19065
AZOBR_RS19070: AZOBR_RS19070 - hydrogenase, at 1,047,352 to 1,049,583
_RS19070
AZOBR_RS19075: AZOBR_RS19075 - Fe(II)-dependent oxygenase, at 1,049,834 to 1,050,520
_RS19075
AZOBR_RS19080: AZOBR_RS19080 - hypothetical protein, at 1,050,520 to 1,051,191
_RS19080
Position (kb)
1047
1048
1049
1050 Strain fitness (log2 ratio)
-2
-1
0
1 at 1046.359 kb on - strand, within AZOBR_RS19065 at 1046.715 kb on + strand, within AZOBR_RS19065 at 1046.716 kb on - strand, within AZOBR_RS19065 at 1046.716 kb on - strand, within AZOBR_RS19065 at 1047.225 kb on + strand at 1047.225 kb on + strand at 1047.225 kb on + strand at 1047.225 kb on + strand at 1047.225 kb on + strand at 1047.226 kb on - strand at 1047.226 kb on - strand at 1047.226 kb on - strand at 1047.733 kb on + strand, within AZOBR_RS19070 at 1047.733 kb on + strand, within AZOBR_RS19070 at 1047.733 kb on + strand, within AZOBR_RS19070 at 1047.734 kb on - strand, within AZOBR_RS19070 at 1047.734 kb on - strand, within AZOBR_RS19070 at 1047.763 kb on + strand, within AZOBR_RS19070 at 1047.764 kb on - strand, within AZOBR_RS19070 at 1047.892 kb on + strand, within AZOBR_RS19070 at 1047.893 kb on - strand, within AZOBR_RS19070 at 1047.893 kb on - strand, within AZOBR_RS19070 at 1047.994 kb on + strand, within AZOBR_RS19070 at 1048.102 kb on + strand, within AZOBR_RS19070 at 1048.102 kb on + strand, within AZOBR_RS19070 at 1048.103 kb on - strand, within AZOBR_RS19070 at 1048.109 kb on - strand, within AZOBR_RS19070 at 1048.213 kb on + strand, within AZOBR_RS19070 at 1048.213 kb on + strand, within AZOBR_RS19070 at 1048.300 kb on + strand, within AZOBR_RS19070 at 1048.300 kb on + strand, within AZOBR_RS19070 at 1048.301 kb on - strand, within AZOBR_RS19070 at 1048.324 kb on + strand, within AZOBR_RS19070 at 1048.325 kb on - strand, within AZOBR_RS19070 at 1048.508 kb on - strand, within AZOBR_RS19070 at 1048.619 kb on - strand, within AZOBR_RS19070 at 1048.844 kb on - strand, within AZOBR_RS19070 at 1048.870 kb on + strand, within AZOBR_RS19070 at 1048.870 kb on + strand, within AZOBR_RS19070 at 1048.871 kb on - strand, within AZOBR_RS19070 at 1048.990 kb on + strand, within AZOBR_RS19070 at 1049.074 kb on + strand, within AZOBR_RS19070 at 1049.074 kb on + strand, within AZOBR_RS19070 at 1049.075 kb on - strand, within AZOBR_RS19070 at 1049.204 kb on - strand, within AZOBR_RS19070 at 1049.204 kb on - strand, within AZOBR_RS19070 at 1049.209 kb on + strand, within AZOBR_RS19070 at 1049.366 kb on - strand at 1049.377 kb on + strand at 1049.443 kb on + strand at 1049.480 kb on - strand at 1049.503 kb on + strand at 1049.503 kb on + strand at 1049.504 kb on - strand at 1049.647 kb on + strand at 1049.647 kb on + strand at 1049.647 kb on + strand at 1049.647 kb on + strand at 1049.647 kb on + strand at 1049.647 kb on + strand at 1049.647 kb on + strand at 1049.648 kb on - strand at 1049.648 kb on - strand at 1049.649 kb on + strand at 1049.649 kb on + strand at 1049.666 kb on - strand at 1050.110 kb on + strand, within AZOBR_RS19075 at 1050.248 kb on + strand, within AZOBR_RS19075 at 1050.248 kb on + strand, within AZOBR_RS19075 at 1050.249 kb on - strand, within AZOBR_RS19075 at 1050.249 kb on - strand, within AZOBR_RS19075 at 1050.404 kb on + strand, within AZOBR_RS19075 at 1050.405 kb on - strand, within AZOBR_RS19075
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6784116667 mM remove 1,046,359 - AZOBR_RS19065 0.63 -0.1 1,046,715 + AZOBR_RS19065 0.87 -0.4 1,046,716 - AZOBR_RS19065 0.87 +0.4 1,046,716 - AZOBR_RS19065 0.87 -0.3 1,047,225 + -0.3 1,047,225 + +0.8 1,047,225 + +0.1 1,047,225 + -0.5 1,047,225 + +0.9 1,047,226 - -0.3 1,047,226 - -2.0 1,047,226 - +1.0 1,047,733 + AZOBR_RS19070 0.17 -0.2 1,047,733 + AZOBR_RS19070 0.17 +0.0 1,047,733 + AZOBR_RS19070 0.17 +1.0 1,047,734 - AZOBR_RS19070 0.17 +0.1 1,047,734 - AZOBR_RS19070 0.17 +0.4 1,047,763 + AZOBR_RS19070 0.18 -0.5 1,047,764 - AZOBR_RS19070 0.18 -0.1 1,047,892 + AZOBR_RS19070 0.24 +0.3 1,047,893 - AZOBR_RS19070 0.24 -0.2 1,047,893 - AZOBR_RS19070 0.24 +1.3 1,047,994 + AZOBR_RS19070 0.29 +1.0 1,048,102 + AZOBR_RS19070 0.34 -0.5 1,048,102 + AZOBR_RS19070 0.34 +0.6 1,048,103 - AZOBR_RS19070 0.34 +0.0 1,048,109 - AZOBR_RS19070 0.34 +1.2 1,048,213 + AZOBR_RS19070 0.39 +0.5 1,048,213 + AZOBR_RS19070 0.39 +0.6 1,048,300 + AZOBR_RS19070 0.42 +0.5 1,048,300 + AZOBR_RS19070 0.42 +0.5 1,048,301 - AZOBR_RS19070 0.43 +0.9 1,048,324 + AZOBR_RS19070 0.44 -0.7 1,048,325 - AZOBR_RS19070 0.44 -0.3 1,048,508 - AZOBR_RS19070 0.52 +0.2 1,048,619 - AZOBR_RS19070 0.57 -0.3 1,048,844 - AZOBR_RS19070 0.67 +0.4 1,048,870 + AZOBR_RS19070 0.68 -0.3 1,048,870 + AZOBR_RS19070 0.68 -0.0 1,048,871 - AZOBR_RS19070 0.68 +0.0 1,048,990 + AZOBR_RS19070 0.73 -0.1 1,049,074 + AZOBR_RS19070 0.77 -0.4 1,049,074 + AZOBR_RS19070 0.77 -0.5 1,049,075 - AZOBR_RS19070 0.77 +1.6 1,049,204 - AZOBR_RS19070 0.83 -0.2 1,049,204 - AZOBR_RS19070 0.83 +0.0 1,049,209 + AZOBR_RS19070 0.83 +0.1 1,049,366 - +0.2 1,049,377 + +0.0 1,049,443 + +0.3 1,049,480 - +0.2 1,049,503 + +0.1 1,049,503 + +0.0 1,049,504 - +0.5 1,049,647 + -0.2 1,049,647 + +0.2 1,049,647 + -0.6 1,049,647 + -0.2 1,049,647 + -0.5 1,049,647 + +0.1 1,049,647 + -1.2 1,049,648 - +0.0 1,049,648 - -0.9 1,049,649 + +0.3 1,049,649 + -0.3 1,049,666 - +0.1 1,050,110 + AZOBR_RS19075 0.40 -0.4 1,050,248 + AZOBR_RS19075 0.60 +0.9 1,050,248 + AZOBR_RS19075 0.60 +0.5 1,050,249 - AZOBR_RS19075 0.60 +0.4 1,050,249 - AZOBR_RS19075 0.60 -0.1 1,050,404 + AZOBR_RS19075 0.83 -0.1 1,050,405 - AZOBR_RS19075 0.83 -0.5
Or see this region's nucleotide sequence