Experiment: 1-octen-3-ol 0.6784116667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS15750 and AZOBR_RS15760 are separated by 753 nucleotides AZOBR_RS15760 and AZOBR_RS15765 overlap by 4 nucleotides
AZOBR_RS15750: AZOBR_RS15750 - hypothetical protein, at 284,905 to 285,792
_RS15750
AZOBR_RS15760: AZOBR_RS15760 - ATP-binding protein, at 286,546 to 287,484
_RS15760
AZOBR_RS15765: AZOBR_RS15765 - osmoprotectant uptake system permease, at 287,481 to 288,653
_RS15765
Position (kb) 286
287
288 Strain fitness (log2 ratio) -2
-1
0
1
2 at 285.583 kb on + strand, within AZOBR_RS15750 at 285.584 kb on - strand, within AZOBR_RS15750 at 285.584 kb on - strand, within AZOBR_RS15750 at 285.676 kb on + strand, within AZOBR_RS15750 at 285.676 kb on + strand, within AZOBR_RS15750 at 285.676 kb on + strand, within AZOBR_RS15750 at 285.676 kb on + strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.677 kb on - strand, within AZOBR_RS15750 at 285.902 kb on + strand at 285.902 kb on + strand at 285.903 kb on - strand at 285.903 kb on - strand at 285.903 kb on - strand at 286.416 kb on + strand at 286.416 kb on + strand at 286.416 kb on + strand at 286.416 kb on + strand at 286.416 kb on + strand at 287.249 kb on + strand, within AZOBR_RS15760 at 287.249 kb on + strand, within AZOBR_RS15760 at 287.855 kb on - strand, within AZOBR_RS15765 at 288.142 kb on + strand, within AZOBR_RS15765 at 288.418 kb on + strand, within AZOBR_RS15765 at 288.418 kb on + strand, within AZOBR_RS15765
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6784116667 mM remove 285,583 + AZOBR_RS15750 0.76 +0.2 285,584 - AZOBR_RS15750 0.76 -1.7 285,584 - AZOBR_RS15750 0.76 -0.5 285,676 + AZOBR_RS15750 0.87 -0.2 285,676 + AZOBR_RS15750 0.87 -0.5 285,676 + AZOBR_RS15750 0.87 +0.8 285,676 + AZOBR_RS15750 0.87 +0.0 285,677 - AZOBR_RS15750 0.87 +2.0 285,677 - AZOBR_RS15750 0.87 +1.0 285,677 - AZOBR_RS15750 0.87 +0.0 285,677 - AZOBR_RS15750 0.87 -0.6 285,677 - AZOBR_RS15750 0.87 +0.0 285,902 + +0.5 285,902 + +0.0 285,903 - +0.3 285,903 - -1.3 285,903 - +0.9 286,416 + -0.1 286,416 + -0.6 286,416 + +0.8 286,416 + +0.2 286,416 + -0.3 287,249 + AZOBR_RS15760 0.75 -2.1 287,249 + AZOBR_RS15760 0.75 -1.1 287,855 - AZOBR_RS15765 0.32 -0.5 288,142 + AZOBR_RS15765 0.56 -0.5 288,418 + AZOBR_RS15765 0.80 +0.9 288,418 + AZOBR_RS15765 0.80 +0.2
Or see this region's nucleotide sequence