Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04644

Experiment: 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04642 and MPMX20_04643 are separated by 14 nucleotidesMPMX20_04643 and MPMX20_04644 are separated by 84 nucleotidesMPMX20_04644 and MPMX20_04645 are separated by 163 nucleotides MPMX20_04642: MPMX20_04642 - Phosphate import ATP-binding protein PstB, at 4,862,860 to 4,863,633 _04642 MPMX20_04643: MPMX20_04643 - Phosphate-specific transport system accessory protein PhoU, at 4,863,648 to 4,864,373 _04643 MPMX20_04644: MPMX20_04644 - 6-phosphogluconate phosphatase, at 4,864,458 to 4,865,123 _04644 MPMX20_04645: MPMX20_04645 - Adenine permease AdeP, at 4,865,287 to 4,866,627 _04645 Position (kb) 4864 4865 4866Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4863.686 kb on + strandat 4863.686 kb on + strandat 4863.686 kb on + strandat 4863.686 kb on + strandat 4863.686 kb on + strandat 4864.529 kb on - strand, within MPMX20_04644at 4864.672 kb on + strand, within MPMX20_04644at 4864.773 kb on + strand, within MPMX20_04644at 4864.805 kb on - strand, within MPMX20_04644at 4864.820 kb on - strand, within MPMX20_04644at 4864.870 kb on + strand, within MPMX20_04644at 4864.936 kb on - strand, within MPMX20_04644at 4864.956 kb on + strand, within MPMX20_04644at 4864.981 kb on + strand, within MPMX20_04644at 4864.981 kb on + strand, within MPMX20_04644at 4864.989 kb on - strand, within MPMX20_04644at 4864.989 kb on - strand, within MPMX20_04644at 4864.989 kb on - strand, within MPMX20_04644at 4865.013 kb on - strand, within MPMX20_04644at 4865.067 kb on - strandat 4865.074 kb on - strandat 4865.079 kb on - strandat 4865.081 kb on + strandat 4865.294 kb on + strandat 4865.308 kb on + strandat 4865.325 kb on + strandat 4865.325 kb on + strandat 4865.325 kb on + strandat 4865.328 kb on - strandat 4865.342 kb on + strandat 4865.386 kb on - strandat 4865.423 kb on - strand, within MPMX20_04645at 4865.506 kb on - strand, within MPMX20_04645at 4865.513 kb on + strand, within MPMX20_04645at 4865.516 kb on - strand, within MPMX20_04645at 4865.539 kb on - strand, within MPMX20_04645at 4865.741 kb on + strand, within MPMX20_04645at 4865.749 kb on - strand, within MPMX20_04645at 4865.805 kb on - strand, within MPMX20_04645at 4865.833 kb on - strand, within MPMX20_04645at 4865.840 kb on + strand, within MPMX20_04645at 4865.913 kb on + strand, within MPMX20_04645at 4865.950 kb on - strand, within MPMX20_04645at 4865.959 kb on + strand, within MPMX20_04645at 4865.964 kb on + strand, within MPMX20_04645at 4865.969 kb on + strand, within MPMX20_04645at 4866.073 kb on - strand, within MPMX20_04645

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1
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4,863,686 + +1.3
4,863,686 + +0.1
4,863,686 + +1.3
4,863,686 + -0.2
4,863,686 + +1.9
4,864,529 - MPMX20_04644 0.11 -0.1
4,864,672 + MPMX20_04644 0.32 -2.2
4,864,773 + MPMX20_04644 0.47 +1.7
4,864,805 - MPMX20_04644 0.52 -3.1
4,864,820 - MPMX20_04644 0.54 +0.8
4,864,870 + MPMX20_04644 0.62 -0.9
4,864,936 - MPMX20_04644 0.72 +0.4
4,864,956 + MPMX20_04644 0.75 -0.2
4,864,981 + MPMX20_04644 0.79 -0.5
4,864,981 + MPMX20_04644 0.79 -0.7
4,864,989 - MPMX20_04644 0.80 +0.3
4,864,989 - MPMX20_04644 0.80 -0.7
4,864,989 - MPMX20_04644 0.80 +1.6
4,865,013 - MPMX20_04644 0.83 -1.5
4,865,067 - -1.2
4,865,074 - -0.2
4,865,079 - -0.4
4,865,081 + +0.3
4,865,294 + +1.1
4,865,308 + +1.3
4,865,325 + +0.2
4,865,325 + -0.5
4,865,325 + +1.3
4,865,328 - -0.7
4,865,342 + -0.8
4,865,386 - -0.9
4,865,423 - MPMX20_04645 0.10 +0.7
4,865,506 - MPMX20_04645 0.16 -2.3
4,865,513 + MPMX20_04645 0.17 -1.9
4,865,516 - MPMX20_04645 0.17 +2.9
4,865,539 - MPMX20_04645 0.19 -0.2
4,865,741 + MPMX20_04645 0.34 -0.0
4,865,749 - MPMX20_04645 0.34 +1.9
4,865,805 - MPMX20_04645 0.39 -1.3
4,865,833 - MPMX20_04645 0.41 +0.4
4,865,840 + MPMX20_04645 0.41 -1.7
4,865,913 + MPMX20_04645 0.47 -1.6
4,865,950 - MPMX20_04645 0.49 -0.7
4,865,959 + MPMX20_04645 0.50 -0.1
4,865,964 + MPMX20_04645 0.50 -0.4
4,865,969 + MPMX20_04645 0.51 +0.9
4,866,073 - MPMX20_04645 0.59 -0.8

Or see this region's nucleotide sequence