Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03476

Experiment: 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03474 and MPMX20_03475 are separated by 37 nucleotidesMPMX20_03475 and MPMX20_03476 are separated by 131 nucleotidesMPMX20_03476 and MPMX20_03477 are separated by 43 nucleotidesMPMX20_03477 and MPMX20_03478 are separated by 31 nucleotides MPMX20_03474: MPMX20_03474 - hypothetical protein, at 3,664,822 to 3,666,192 _03474 MPMX20_03475: MPMX20_03475 - hypothetical protein, at 3,666,230 to 3,666,634 _03475 MPMX20_03476: MPMX20_03476 - 50S ribosomal protein L19, at 3,666,766 to 3,667,113 _03476 MPMX20_03477: MPMX20_03477 - tRNA (guanine-N(1)-)-methyltransferase, at 3,667,157 to 3,667,924 _03477 MPMX20_03478: MPMX20_03478 - Ribosome maturation factor RimM, at 3,667,956 to 3,668,492 _03478 Position (kb) 3666 3667 3668Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3665.822 kb on - strand, within MPMX20_03474at 3665.822 kb on - strand, within MPMX20_03474at 3665.822 kb on - strand, within MPMX20_03474at 3665.825 kb on + strand, within MPMX20_03474at 3665.832 kb on + strand, within MPMX20_03474at 3665.840 kb on - strand, within MPMX20_03474at 3665.840 kb on - strand, within MPMX20_03474at 3665.840 kb on - strand, within MPMX20_03474at 3665.840 kb on - strand, within MPMX20_03474at 3665.907 kb on - strand, within MPMX20_03474at 3665.918 kb on + strand, within MPMX20_03474at 3665.955 kb on + strand, within MPMX20_03474at 3665.965 kb on - strand, within MPMX20_03474at 3666.004 kb on - strand, within MPMX20_03474at 3666.071 kb on + strandat 3666.156 kb on + strandat 3666.179 kb on + strandat 3666.266 kb on + strandat 3666.330 kb on - strand, within MPMX20_03475at 3666.343 kb on + strand, within MPMX20_03475at 3666.343 kb on + strand, within MPMX20_03475at 3666.343 kb on + strand, within MPMX20_03475at 3666.343 kb on - strand, within MPMX20_03475at 3666.343 kb on - strand, within MPMX20_03475at 3666.351 kb on - strand, within MPMX20_03475at 3666.400 kb on + strand, within MPMX20_03475at 3666.408 kb on - strand, within MPMX20_03475at 3666.436 kb on - strand, within MPMX20_03475at 3666.476 kb on + strand, within MPMX20_03475at 3666.540 kb on + strand, within MPMX20_03475at 3666.563 kb on - strand, within MPMX20_03475at 3666.691 kb on - strandat 3666.838 kb on - strand, within MPMX20_03476at 3667.174 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1
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3,665,822 - MPMX20_03474 0.73 -0.8
3,665,822 - MPMX20_03474 0.73 +1.2
3,665,822 - MPMX20_03474 0.73 +0.1
3,665,825 + MPMX20_03474 0.73 -0.9
3,665,832 + MPMX20_03474 0.74 -2.2
3,665,840 - MPMX20_03474 0.74 +0.7
3,665,840 - MPMX20_03474 0.74 +4.6
3,665,840 - MPMX20_03474 0.74 -0.9
3,665,840 - MPMX20_03474 0.74 +1.2
3,665,907 - MPMX20_03474 0.79 -1.5
3,665,918 + MPMX20_03474 0.80 +0.0
3,665,955 + MPMX20_03474 0.83 -0.4
3,665,965 - MPMX20_03474 0.83 -1.0
3,666,004 - MPMX20_03474 0.86 +0.5
3,666,071 + +0.0
3,666,156 + -1.6
3,666,179 + +1.2
3,666,266 + +0.0
3,666,330 - MPMX20_03475 0.25 +0.7
3,666,343 + MPMX20_03475 0.28 -1.9
3,666,343 + MPMX20_03475 0.28 +0.2
3,666,343 + MPMX20_03475 0.28 -1.8
3,666,343 - MPMX20_03475 0.28 -2.3
3,666,343 - MPMX20_03475 0.28 +2.0
3,666,351 - MPMX20_03475 0.30 -2.0
3,666,400 + MPMX20_03475 0.42 -2.8
3,666,408 - MPMX20_03475 0.44 -0.9
3,666,436 - MPMX20_03475 0.51 -1.6
3,666,476 + MPMX20_03475 0.61 +1.0
3,666,540 + MPMX20_03475 0.77 -1.6
3,666,563 - MPMX20_03475 0.82 -2.0
3,666,691 - -1.0
3,666,838 - MPMX20_03476 0.21 -0.5
3,667,174 - -1.9

Or see this region's nucleotide sequence