Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01391

Experiment: 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01389 and MPMX20_01390 are separated by 180 nucleotidesMPMX20_01390 and MPMX20_01391 overlap by 1 nucleotidesMPMX20_01391 and MPMX20_01392 are separated by 2 nucleotides MPMX20_01389: MPMX20_01389 - Multidrug efflux pump accessory protein AcrZ, at 1,452,008 to 1,452,157 _01389 MPMX20_01390: MPMX20_01390 - Molybdate-binding protein ModA, at 1,452,338 to 1,453,111 _01390 MPMX20_01391: MPMX20_01391 - Molybdenum transport system permease protein ModB, at 1,453,111 to 1,453,800 _01391 MPMX20_01392: MPMX20_01392 - Vitamin B12 import ATP-binding protein BtuD, at 1,453,803 to 1,454,861 _01392 Position (kb) 1453 1454Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1452.134 kb on + strand, within MPMX20_01389at 1452.142 kb on - strand, within MPMX20_01389at 1452.142 kb on - strand, within MPMX20_01389at 1452.172 kb on + strandat 1452.244 kb on + strandat 1452.244 kb on + strandat 1452.244 kb on + strandat 1452.244 kb on + strandat 1452.274 kb on - strandat 1452.345 kb on + strandat 1452.353 kb on - strandat 1452.353 kb on - strandat 1452.353 kb on - strandat 1452.383 kb on + strandat 1452.409 kb on - strandat 1452.409 kb on - strandat 1452.414 kb on - strandat 1452.414 kb on - strandat 1452.458 kb on + strand, within MPMX20_01390at 1452.463 kb on + strand, within MPMX20_01390at 1452.488 kb on - strand, within MPMX20_01390at 1452.503 kb on - strand, within MPMX20_01390at 1452.579 kb on - strand, within MPMX20_01390at 1452.584 kb on + strand, within MPMX20_01390at 1452.722 kb on + strand, within MPMX20_01390at 1452.730 kb on - strand, within MPMX20_01390at 1452.765 kb on + strand, within MPMX20_01390at 1452.787 kb on + strand, within MPMX20_01390at 1452.787 kb on + strand, within MPMX20_01390at 1452.795 kb on - strand, within MPMX20_01390at 1452.831 kb on + strand, within MPMX20_01390at 1452.851 kb on - strand, within MPMX20_01390at 1452.872 kb on + strand, within MPMX20_01390at 1452.891 kb on - strand, within MPMX20_01390at 1452.946 kb on + strand, within MPMX20_01390at 1452.989 kb on + strand, within MPMX20_01390at 1453.054 kb on + strandat 1453.055 kb on - strandat 1453.062 kb on - strandat 1453.070 kb on - strandat 1453.089 kb on - strandat 1453.141 kb on + strandat 1453.141 kb on + strandat 1453.141 kb on + strandat 1453.141 kb on + strandat 1453.141 kb on + strandat 1453.149 kb on - strandat 1453.226 kb on - strand, within MPMX20_01391at 1453.238 kb on + strand, within MPMX20_01391at 1453.358 kb on + strand, within MPMX20_01391at 1453.358 kb on + strand, within MPMX20_01391at 1453.366 kb on - strand, within MPMX20_01391at 1453.431 kb on + strand, within MPMX20_01391at 1453.472 kb on + strand, within MPMX20_01391at 1453.486 kb on + strand, within MPMX20_01391at 1453.570 kb on + strand, within MPMX20_01391at 1453.570 kb on + strand, within MPMX20_01391at 1453.578 kb on - strand, within MPMX20_01391at 1453.578 kb on - strand, within MPMX20_01391at 1453.578 kb on - strand, within MPMX20_01391at 1453.578 kb on - strand, within MPMX20_01391at 1453.710 kb on + strand, within MPMX20_01391at 1453.773 kb on + strandat 1453.781 kb on - strandat 1453.800 kb on - strandat 1453.820 kb on - strandat 1453.889 kb on - strandat 1454.105 kb on + strand, within MPMX20_01392at 1454.163 kb on + strand, within MPMX20_01392at 1454.163 kb on + strand, within MPMX20_01392at 1454.171 kb on - strand, within MPMX20_01392at 1454.182 kb on - strand, within MPMX20_01392at 1454.205 kb on - strand, within MPMX20_01392at 1454.222 kb on - strand, within MPMX20_01392at 1454.311 kb on + strand, within MPMX20_01392at 1454.311 kb on + strand, within MPMX20_01392at 1454.314 kb on - strand, within MPMX20_01392at 1454.348 kb on + strand, within MPMX20_01392at 1454.348 kb on + strand, within MPMX20_01392at 1454.349 kb on + strand, within MPMX20_01392at 1454.412 kb on - strand, within MPMX20_01392at 1454.414 kb on + strand, within MPMX20_01392at 1454.419 kb on + strand, within MPMX20_01392at 1454.419 kb on + strand, within MPMX20_01392at 1454.419 kb on + strand, within MPMX20_01392at 1454.427 kb on - strand, within MPMX20_01392at 1454.427 kb on - strand, within MPMX20_01392at 1454.455 kb on - strand, within MPMX20_01392at 1454.503 kb on + strand, within MPMX20_01392at 1454.503 kb on + strand, within MPMX20_01392at 1454.503 kb on + strand, within MPMX20_01392at 1454.503 kb on + strand, within MPMX20_01392at 1454.503 kb on + strand, within MPMX20_01392at 1454.503 kb on + strand, within MPMX20_01392at 1454.511 kb on - strand, within MPMX20_01392at 1454.511 kb on - strand, within MPMX20_01392at 1454.511 kb on - strand, within MPMX20_01392at 1454.511 kb on - strand, within MPMX20_01392at 1454.511 kb on - strand, within MPMX20_01392at 1454.555 kb on + strand, within MPMX20_01392at 1454.578 kb on - strand, within MPMX20_01392at 1454.615 kb on + strand, within MPMX20_01392at 1454.615 kb on + strand, within MPMX20_01392at 1454.664 kb on + strand, within MPMX20_01392at 1454.729 kb on + strand, within MPMX20_01392at 1454.737 kb on - strand, within MPMX20_01392at 1454.748 kb on - strand, within MPMX20_01392at 1454.755 kb on + strand, within MPMX20_01392at 1454.779 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1
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1,452,134 + MPMX20_01389 0.84 -1.1
1,452,142 - MPMX20_01389 0.89 -1.0
1,452,142 - MPMX20_01389 0.89 -0.6
1,452,172 + +3.1
1,452,244 + +0.1
1,452,244 + +0.1
1,452,244 + -1.4
1,452,244 + +0.3
1,452,274 - +0.2
1,452,345 + +0.1
1,452,353 - +1.0
1,452,353 - -0.2
1,452,353 - -1.1
1,452,383 + -1.0
1,452,409 - +0.7
1,452,409 - -0.5
1,452,414 - -1.3
1,452,414 - +2.5
1,452,458 + MPMX20_01390 0.16 +0.6
1,452,463 + MPMX20_01390 0.16 -0.4
1,452,488 - MPMX20_01390 0.19 -1.2
1,452,503 - MPMX20_01390 0.21 +1.6
1,452,579 - MPMX20_01390 0.31 -1.7
1,452,584 + MPMX20_01390 0.32 +1.1
1,452,722 + MPMX20_01390 0.50 -0.0
1,452,730 - MPMX20_01390 0.51 -1.0
1,452,765 + MPMX20_01390 0.55 -1.1
1,452,787 + MPMX20_01390 0.58 -0.7
1,452,787 + MPMX20_01390 0.58 +1.3
1,452,795 - MPMX20_01390 0.59 +1.7
1,452,831 + MPMX20_01390 0.64 +0.5
1,452,851 - MPMX20_01390 0.66 -1.1
1,452,872 + MPMX20_01390 0.69 +1.0
1,452,891 - MPMX20_01390 0.71 +1.5
1,452,946 + MPMX20_01390 0.79 -0.6
1,452,989 + MPMX20_01390 0.84 -0.5
1,453,054 + -0.3
1,453,055 - +0.1
1,453,062 - +1.5
1,453,070 - +3.1
1,453,089 - +1.1
1,453,141 + -0.7
1,453,141 + +0.3
1,453,141 + -1.8
1,453,141 + -2.1
1,453,141 + +1.1
1,453,149 - -0.9
1,453,226 - MPMX20_01391 0.17 -0.5
1,453,238 + MPMX20_01391 0.18 -1.5
1,453,358 + MPMX20_01391 0.36 -1.6
1,453,358 + MPMX20_01391 0.36 -1.3
1,453,366 - MPMX20_01391 0.37 -0.6
1,453,431 + MPMX20_01391 0.46 -0.2
1,453,472 + MPMX20_01391 0.52 -0.1
1,453,486 + MPMX20_01391 0.54 +2.1
1,453,570 + MPMX20_01391 0.67 +0.1
1,453,570 + MPMX20_01391 0.67 -0.5
1,453,578 - MPMX20_01391 0.68 +0.6
1,453,578 - MPMX20_01391 0.68 -0.3
1,453,578 - MPMX20_01391 0.68 -1.5
1,453,578 - MPMX20_01391 0.68 -0.2
1,453,710 + MPMX20_01391 0.87 -0.9
1,453,773 + -0.3
1,453,781 - +0.5
1,453,800 - +3.1
1,453,820 - -0.8
1,453,889 - +0.4
1,454,105 + MPMX20_01392 0.29 +0.9
1,454,163 + MPMX20_01392 0.34 -0.7
1,454,163 + MPMX20_01392 0.34 +2.1
1,454,171 - MPMX20_01392 0.35 -1.7
1,454,182 - MPMX20_01392 0.36 +2.1
1,454,205 - MPMX20_01392 0.38 -0.4
1,454,222 - MPMX20_01392 0.40 -1.1
1,454,311 + MPMX20_01392 0.48 +0.5
1,454,311 + MPMX20_01392 0.48 +1.5
1,454,314 - MPMX20_01392 0.48 -0.3
1,454,348 + MPMX20_01392 0.51 +0.1
1,454,348 + MPMX20_01392 0.51 -0.2
1,454,349 + MPMX20_01392 0.52 +0.2
1,454,412 - MPMX20_01392 0.58 -0.5
1,454,414 + MPMX20_01392 0.58 -1.8
1,454,419 + MPMX20_01392 0.58 -2.9
1,454,419 + MPMX20_01392 0.58 +1.4
1,454,419 + MPMX20_01392 0.58 -1.7
1,454,427 - MPMX20_01392 0.59 +2.3
1,454,427 - MPMX20_01392 0.59 -1.0
1,454,455 - MPMX20_01392 0.62 -2.1
1,454,503 + MPMX20_01392 0.66 +2.4
1,454,503 + MPMX20_01392 0.66 -1.2
1,454,503 + MPMX20_01392 0.66 -0.2
1,454,503 + MPMX20_01392 0.66 -0.1
1,454,503 + MPMX20_01392 0.66 -2.9
1,454,503 + MPMX20_01392 0.66 -0.7
1,454,511 - MPMX20_01392 0.67 +0.8
1,454,511 - MPMX20_01392 0.67 +1.5
1,454,511 - MPMX20_01392 0.67 +0.1
1,454,511 - MPMX20_01392 0.67 -0.7
1,454,511 - MPMX20_01392 0.67 -1.3
1,454,555 + MPMX20_01392 0.71 -0.8
1,454,578 - MPMX20_01392 0.73 -3.2
1,454,615 + MPMX20_01392 0.77 +0.3
1,454,615 + MPMX20_01392 0.77 -1.1
1,454,664 + MPMX20_01392 0.81 +0.1
1,454,729 + MPMX20_01392 0.87 -1.3
1,454,737 - MPMX20_01392 0.88 +1.2
1,454,748 - MPMX20_01392 0.89 -0.3
1,454,755 + MPMX20_01392 0.90 -0.7
1,454,779 + +1.8

Or see this region's nucleotide sequence